Literature DB >> 35911951

Global stability and analysing the sensitivity of parameters of a multiple-susceptible population model of SARS-CoV-2 emphasising vaccination drive.

R Prem Kumar1,2, P K Santra3, G S Mahapatra1.   

Abstract

The study explores the dynamics of a COVID-19 epidemic in multiple susceptible populations, including the various stages of vaccination administration. In the model, there are eight human compartments: completely susceptible; susceptible with dose-1 vaccination; susceptible with dose-2 vaccination; susceptible with booster dose vaccination; exposed; infected with and without symptoms, and recovered compartments. The biological feasibility of the model is analysed. The threshold value, R 0 , is derived using the next-generation matrix. The stability analysis of the equilibrium points was performed locally and globally using the threshold parameter of the model. The conditions determining disease persistence is obtained. The model is subjected to sensitivity analysis, and the most sensitive parameters are identified. Also, MATLAB is used to verify the mathematical outcomes of the system's dynamic behaviour and suggests that necessary steps should be taken to keep the spread of the omicron variant infectious disease under control. The findings of this study could aid health officials in their efforts to combat the spread of COVID-19.
© 2022 International Association for Mathematics and Computers in Simulation (IMACS). Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Basic reproduction number; Boundedness; Sensitivity; Stability; Vaccination

Year:  2022        PMID: 35911951      PMCID: PMC9308141          DOI: 10.1016/j.matcom.2022.07.012

Source DB:  PubMed          Journal:  Math Comput Simul        ISSN: 0378-4754            Impact factor:   3.601


Introduction

SARS-CoV-2 or Coronavirus-19 was officially declared a global epidemic in March 2020, affecting and changing human life worldwide. It has only been recently that many countries have started investigating the origins of the new coronavirus. Some of its characteristics complicate the detection of epidemic breakouts; among them is the large number of people who are asymptomatic but can infect others. Furthermore, the number of hospitalised patients with COVID-19 increases asymmetrically with age; it is almost innocuous for teenagers and young adults. However, it is hazardous for the elderly, especially in conjunction with other conditions; it has caused more than deaths in Italy, accounting for more than 3 million infections; The average age of COVID-19 patients who died in Italy was 81. Social distancing, face masks, lock-downs, self-isolation/quarantine, contact tracing, and vaccination administration are all effective techniques for avoiding the spread of this virus. The Centers for Disease Control and Prevention have designated this pandemic as a public health issue. Approximately six feet apart, droplets are the means of transmission caused by coughing, sneezing, and talking. The Spanish Flu (1918 to 1920) and the Ebola epidemic (2014 to 2016) are examples of historical pandemics that have impacted human health and economic development [1], [2], [3], [4] The Indian government has approved four vaccinations: Covishield, Covaxin, Sputnik V, and spikevax. The Indian government began vaccinating individuals with the help of the National Expert Group on COVID-19 Vaccine Administration (NEGVAC), intending to vaccinate 300 million people in 180 days and complete the process by August 2021. The vaccination was administered to people in three phases. The first phase vaccination programme, which began on January 16, 2021, was only for health and front-line workers and was completed by April 3, 2021. The phase two vaccination programme began on March 1, 2021, and was mainly for people over 45 years old with other health complications and 60+year-old adults. Finally, the Phase 3 vaccination programme was opened to all adults over 18 years on May 1, 2021, after the second wave hit the country in April 2021 [5], [6], [7], [8]. There were many variants of COVID-19 as announced by WHO, namely the alpha variant spreading to many countries in late 2020, the variant beta(B.1.351) dominant in many parts of southern Africa, the Gamma variant (P.1) dominant in the U.S and Brazil in January 2021, the Delta variant (B.1.617.2) dominant in many countries including India from December 2020, variant Mu(B.1.621) dominant in South Africa and other countries from January 2021, R.1 variant dominant in Japan in March 2021, omicron variant(B1.1.529) dominant in South Africa, India and U.S from November 2021 onwards [9]. A model for tracking and predicting the intensity of the virus is required to plan for future outbreaks and alert administrations and communities about what can be done today to prevent transmission and infection. We can model and track current outbreak trends to prepare for future breakouts. This measure will help prevent the next coronavirus outbreak from being as severe. Global health decisions are made better with mathematical models that allow us to understand epidemiological patterns. Epidemic transmission patterns remain challenging to predict because a mathematical system is contingent on the presence of its solutions. Data is frequently skewed, delayed, or erroneous, and obtaining quality data is one of the most challenging tasks. Furthermore, traditional epidemic models assume that epidemic transmission occurs without interventions, a rare event. Keeping track of daily activities and travel, which intertwine with the spread of infection, makes it more challenging. Furthermore, there are far too many occurrences in hospitals where the interaction rate is more significant than in the general population. This cannot be ignored anyhow. Another difficulty here is estimating the epidemic model’s parameters. To fully understand, capture, and predict the transmission of infectious illnesses, epidemiologists must continue to use mathematical models. Recently, there has been much research and development into understanding and predicting COVID-19. Using mathematical formulations to model the transmission of infectious diseases like COVID-19 is a well-established approach to analysing individuals and their infections in communities. Several studies have been published examining the dynamics of the COVID-19 epidemic worldwide [14], [15], [16], [17], [18], [19], [20], [21], [22], [23], [24], [25], [26], [27], [28], [30], [32], [35], [36], [37], [38], [39], [41], [42], [43], [44], [45], [46], [47], [48], [49], [50], [52], [53], [54], [55], [57], [58], [59], [60], [61], [62], [63], [64], [65], [66], [67], [68], [69], [70], [71], [72], [73], [74], [75], [76], [77], [78], [79], [80], [81], [82], [83]. Vaccination’s impact on the spread of COVID-19 has been the subject of several articles [40], [51]. During the second wave of COVID-19, mathematical models involving multiple susceptible compartments with each susceptible compartment containing individuals at varying phases of vaccination were the least explored. We present a compartmental mathematical model that includes multiple susceptible compartments corresponding to distinct vaccination stages. The mathematical model is described and formalised in Section 2. The Section 3 examines the model’s essential characteristics. The system’s equilibrium points are determined in Section 3.3, and the criteria for its existence are specified. The disease-free equilibrium is discussed in Section 4, and the endemic equilibrium point is examined in Section 5. A bifurcation analysis is conducted in Section 6. In Section 7, the sensitivity analysis is carried out, and the parameter with the most sensitivity index is identified. The parameter estimation is performed in Section 8. The numerical simulations are performed in Section 9 and finally, in Section 10, all of the results have been summarised.

Construction of novel COVID-19 model

The COVID-19 model’s population is organised into eight classes, namely, the susceptible population without vaccination (), the susceptible population vaccinated with dose 1 (), the susceptible population vaccinated with dose 2 (), susceptible population with a booster dose (), exposed population (), infected and asymptomatic population to omicron variant induced COVID-19 disease (), infected and symptomatic population to omicron variant induced COVID-19 disease () and the recovered population from omicron variant induced COVID-19 disease (). The following assumptions are included in the model: The total population is assumed to be constant, while the individual compartment populations vary over time. It is assumed that dose-1 vaccination is given to non-vaccinated susceptible individuals, dose-2 vaccination is given to dose-1 vaccinated susceptible individuals, and a booster dose vaccination is given to dose-2 vaccinated individuals. The omicron variant viral infection is assumed to exclusively affect those who have not had either dose-1 or dose-2 of vaccination, and it does not affect people who have received a booster dose. Individuals’ disease-related deaths were assumed to occur mainly in the infected but symptomatic compartment, and only natural death occurs in the remaining compartments. It is assumed that when non-vaccinated individuals have contact with infected but asymptomatic individuals, they get exposed to the infection with the transmission coefficient given by . When susceptible dose-1 vaccinated individuals have contact with infected but asymptomatic individuals, they get exposed to the infection with the transmission coefficient given by . When susceptible dose-2 vaccinated individuals have contact with infected but asymptomatic individuals, they get exposed to the infection with the transmission coefficient given by . It is assumed that those who recover will be immune to the disease for the rest of their lives. It is supposed that the people who are exposed to the infection are asymptomatic of the disease after testing positive for the disease and moves to an asymptomatic infected compartment with the transmission coefficient given by and following the appearance of symptoms, the infected individual transfers to the symptomatic infected compartment, with as the transmission coefficient. The individuals who are recovered from both asymptomatic and symptomatic infections due to supportive care treatments available for COVID-19 disease in hospitals under isolation are recovered and moved to the recovered compartment with a transmission coefficient given by and respectively. Symptomatic infected individuals are assumed to be isolated and undergo supportive care treatments in hospitals, so these individuals do not spread the disease. The omicron variant-induced COVID-19 pandemic model is formulated as below. The preliminary conditions are given by In our model, the flow diagram of the omicron virus transmission in the human population is presented in Fig. 1.
Fig. 1

Virus transmission diagram of the system (1).

Virus transmission diagram of the system (1).

The fundamental characteristics of the model

The characteristic of non-negativity in solutions

It is essential to show that for all time , each solution of system (1) with preliminary conditions (2) remains non-negative. For any, each solution of system(1)with preliminary conditions (2) is non-negative. Using the first equation of (1) with initial condition (2), we get As a result, after integrating, we obtain, Similarly from the remaining equations of (1) utilising the initial conditions (2), we get where , , , , , . Hence, . □

Invariant region and uniform boundedness of solutions

We will now prove that all of system (1)’s solutions are bounded uniformly and there exist solutions to system (1) of in a positively invariant region. The system(1)’s solutions with preliminary conditions (2) are bounded uniformly in and are confined to the region as t , where . Let , where is the total population at time . For we have, if and only if . Using differential inequality theory [31], we can arrive at the following conclusion: which yields as with . Hence system (1)’s solutions with preliminary conditions (2) starting in are bounded uniformly and limited to the region , where . As a result, the closed region is positively invariant, and all system (1)’s solutions are bounded uniformly. □ All of system (1)’s solutions with preliminary conditions (2) have non-negative components in for t 0 and are globally attracted in . As a result, the system (1) with preliminary conditions (2) defined on , where is well-posed mathematically and epidemiologically. We will investigate the dynamics of system (1) without the recovered compartment defined on the invariant region , where , because the recovered compartment of individuals is independent of other compartments.

The system’s equilibrium points

The equilibrium points for the system (1) are as follows Disease free equilibrium (DFE) point , where, . Here, , , , , , Endemic equilibrium (EE) point , where From the sixth equation of (1) after simplification, we get the polynomial equation where Clearly, and if we set , then whenever . The above polynomial in has three roots and by Descartes rule of sign, the polynomial has either one or three positive real roots for all possible combination of signs of and . As a result, the polynomial (8) always has at least one positive root if . Hence if then always and hence belong to . As a result always exists if .

Stability analysis on DFE

Next generation matrix method

The mean number of secondary infections induced by a single infection is known as the Basic Reproduction Number (BRN). It is one of the most important threshold values for mathematically expressing a virus infection’s spread. At a given point , the Jacobian matrix of the system (1) is given by as follows: ’s stability corresponds to eigenvalues of ’s characteristic equation at being of negative real parts, as confirmed by the BRN computed using the next-generation matrix approach. Let us assume and hence the system (1) is expressed as where and The Jacobian matrices of and at are as follows. and The next generation matrix for system (1)is given by The spectral radius of is the BRN given as follows: where , , , , .

The analysis of ’s local stability

In this part, we investigate the local asymptotic stability (LAS) of the disease-free equilibrium point . The point of system (1) is LAS whenever and is unstable if . The jacobian matrix evaluated at of the system (1) is has the following characteristic equation Hence, we get the polynomial in , say The five eigen values of the characteristic equation are given by , , , and . The remaining two eigen values of the characteristic equation are given by the equation After simplifying the above equation, we get where Clearly but if and only if . Hence, is LAS if and unstable if according to Hurwitz–Routh criterion [29]. □

The analysis of ’s global stability

We analyse the global asymptotic stability (GAS) of based on the value of using the conditions in Castillo-Chavez method [34] in this section. To prove the GAS of , the feasible region is used. Firstly, the region ’s positively invariant property is established. For the omicron system (1) , the region is a positively invariant set. From system (1), we obtain Hence we get, If , then . Therefore . Similarly, we deduce from second and third equations of system (1), and , if the initial conditions for . As a result, the region is positively invariant set which attracts all of the system (1) solutions in . □ If , is GAS in . The system (1) is written as Where, dot denotes differentiation with respect to t in this context and , , Furthermore Solving the system , we get and hence and similarly from the other equations of , we get , and . The solutions of do not depend on the initial conditions , . As a result, the asymptotic nature of the solutions , is independent of the preliminary conditions in , ensuring the global asymptotic stability of the equilibrium point and hence the first condition of the Castillo-Chavez method [34] is satisfied. Further in , , , and hence This implies that which satisfies the second condition of the Castillo-Chavez method [34]. As a result, is GAS if 1. □

Stability analysis of EE

In this section, we analyse the local asymptotic stability (LAS) and global asymptotic stability (GAS) of the endemic equilibrium (EE) point . The EE point of the system (1) is LAS if and all of the conditions in the proof are met. The Jacobian matrix of system (1) at is The determinantal equation of (24) is given by Hence we get the polynomial in , say The two latent roots of (26) are and . The remaining latent roots of (26) are analysed using the polynomial equation The coefficients of (27) are as follows: The Hurwitz–Routh criterion [29] states that the polynomial (27) has all five roots be either negative or have roots with negative real parts if and only if the determinants of all Hurwitz matrices are positive, i.e., where , , , The determinants of the Hurwitz matrices are given as follows: But the EE point exists if and hence is LAS if and satisfies the conditions , . □ In this part, the global asymptotic stability (GAS) of endemic equilibrium (EE) point is analysed. If , the EE point is GAS if . The expressions of and are specified in the proof. Let us create a suitable Lyapunov function as follows: Then Using the endemic equilibrium point in (1), we get, and using (32) in (31), we get, where and with and . Thus iff and if and only if for . The EE point exists if and only if , and the singleton set is the biggest compact invariant set in . According to LaSalle’s invariance principle [56], the EE point is GAS in if . □

Bifurcation analysis

The Castilla-Chavez and Song [33] approach is used to study the bifurcation nature of system (1). The system (1) has forward bifurcation at (i.e. at ) whenever , where expression for and are given in the proof. Let for , , , . The transformed system becomes where . The transmission rate of the non-vaccinated susceptible population is considered as the bifurcation parameter with the restriction . Hence we get The transformed system has the disease free equilibrium point , where , , , , , , . , provided in Eq. (13), is the linearisation matrix of the transformed system at . At , the jacobian of system (35) has one zero eigenvalue, while the other eigenvalues have a negative real part. As a result, the dynamics of the transformed system near are studied using the central manifold theory [33]. The necessary calculations as per the central manifold theory [33] is as follows. is the right eigenvector for when is computed using and hence =() is the left eigenvector of jacobian matrix when is computed using and hence we get, for , . Then, is calculated to ensure that condition is met and hence and . The bifurcation coefficients are given by The following expressions give the bifurcation coefficients and after simplification As a result, when , the system (1) at experiences forward bifurcation. In forward bifurcation, when , an unstable disease-free equilibrium coexists with a stable endemic equilibrium point.  □ Bifurcation plot showing the bifurcation point at which the forward bifurcation occurs with parameters values from the Table 5.
Table 5

Parameter values for constructing Fig. 13.

ParametersΛβ1β2β3α1α2α3ξγδ1δ2σ1σ2
Values50.60.30.20.60.50.50.30.30.70.70.30.4

Analysis of sensitivity

A sensitivity study was performed on the system (1) to see how different factors affected OMICRON variant disease transmission in the Indian population. The parameters that have a substantial impact on the system (1)’s BRN are highlighted in this analysis. The health authorities can better manage the spread of the disease by analysing the parameters in relation to the BRN. Sensitivity analysis helps with experiment design, data assimilation, and reduction of complex non-linear models. The normalised forward sensitivity index of that depends differentiably on a parameter is defined as . Here , where , , , , . Then the sensitivity index of that depends on various parameters of the system (1) is given as follows. , , , , , , , , , , . From Fig. 4(B), the sensitivity index of , say is approximately 0.3 for . The physical meaning of this positive sensitivity index of is that increasing (or decreasing) by 10% increases (or decreases) value by 3%. From Fig. 4(J), the sensitivity index of , say is approximately −0.06 for . The physical meaning of this negative sensitivity index of is that increasing (or decreasing) by 10% decreases (or increases) value by 0.6%. A highly sensitive parameter must be carefully estimated, as a very small variation in that parameter will result to large quantitative changes to the system (1).
Fig. 4

The plot of the sensitivity indices of depends on (A) The disease transmission rate of non-vaccinated susceptible population , (B) The disease transmission rate of dose-1 vaccinated susceptible population , (C) The disease transmission rate of dose-2 vaccinated susceptible population , (D) , the proportion of infected but asymptomatic individuals exposing symptoms, (E) The recovery rate of asymptomatic infected individuals from the disease , (F) The rate of exposed individuals who are asymptomatic to the disease , (G) , each population’s natural death rate, (H) The dose-1 vaccination rate administered to non-vaccinated susceptible population, (I) The dose-2 vaccination rate administered to dose-1 vaccinated susceptible population, (J) The booster dose vaccination rate administered to dose-2 vaccinated susceptible population.

Sensitivity index plot of (A) The parameters with positive sensitivity index, and (B) The parameters with negative sensitivity index. From Fig. 3(A), it is evident that the parameter with the most positive sensitivity index relative to is , the infection transmission rate among the non-vaccinated susceptible population. The remaining parameters with positive sensitivity are and arranged from most sensitive to least sensitive positive index.
Fig. 3

Sensitivity index plot of (A) The parameters with positive sensitivity index, and (B) The parameters with negative sensitivity index.

From the Fig. 3(B), it is seen that the most sensitive parameter among the parameters with a negative sensitivity index is , the proportion of the asymptomatic infected population who develop symptoms of the disease and , the recovery rate of asymptomatic infected individuals. The remaining parameters with negative sensitivity are , and arranged from most sensitive to least sensitive negative index. By examining ’s sensitivity indices in relation to various parameters, it is reasonable to conclude that disease transmission rates , and with positive sensitivity indices should be minimised to keep the disease from spreading. Furthermore, vaccination administration rates, specifically , and with a negative sensitivity index, should be maximised to prevent the spread of the disease in society. The plot of the sensitivity indices of depends on (A) The disease transmission rate of non-vaccinated susceptible population , (B) The disease transmission rate of dose-1 vaccinated susceptible population , (C) The disease transmission rate of dose-2 vaccinated susceptible population , (D) , the proportion of infected but asymptomatic individuals exposing symptoms, (E) The recovery rate of asymptomatic infected individuals from the disease , (F) The rate of exposed individuals who are asymptomatic to the disease , (G) , each population’s natural death rate, (H) The dose-1 vaccination rate administered to non-vaccinated susceptible population, (I) The dose-2 vaccination rate administered to dose-1 vaccinated susceptible population, (J) The booster dose vaccination rate administered to dose-2 vaccinated susceptible population. Solution trajectories for the infected populations, namely and , are plotted for distinct values of parameters with the same preliminary conditions to identify the sensitive parameters of the system (1). The parameters in the Table 1 with preliminary conditions are used to numerically simulate system (1). For different values of the disease transmission rate, say , 0.5 and 0.7 of the non-vaccinated susceptible population, , the time series of infected human populations are plotted in Figs. 5(A) and 5(B), respectively. The figures clearly show that the number of infected cases in both populations increased as levels increased. As a result, the disease transmission rate among the non-vaccinated susceptible population is crucial to the disease’s spread.
Table 1

Description of the model parameters.

ParameterDescription
ΛThe non-vaccinated susceptible population’s recruitment rate.
β1Non-vaccinated susceptible population’s infection transmission rate.
β2Disease transmission rate of dose-1 vaccinated susceptible population.
β3The disease transmission rate of dose-2 vaccinated susceptible population.
α1The rate of dose-1 vaccination given to non-vaccinated individuals.
α2The rate of dose-2 vaccination given to dose-1 vaccinated individuals.
α3The rate of booster dose vaccination given to dose-2 vaccinated individuals.
ξThe proportion of death in all populations.
γThe proportion of the exposed population who are infected without symptoms.
δ1The proportion of the asymptomatic infected population who develop symptoms of the disease.
δ2The recovery rate of asymptomatic infected individuals.
σ1The recovery rate of symptomatic infected individuals.
σ2The disease-induced death rate of symptomatic infected individuals.
Fig. 5

A plot of the infected populations and over time for .

Figs. 6(A) and 6(B) show time series of asymptomatic infected and symptomatic infected human populations for different values of the disease transmission rate among the dose-1 vaccinated susceptible population , such as , 0.5, and 0.7. The increase in increases the number of infected cases in both populations, as seen in the figures. As a result, the disease transmission rate within the dose-1 vaccinated susceptible group is critical to the disease’s spread.
Fig. 6

A plot of the infected populations and over time for .

Description of the model parameters. Sensitivity values of . A plot of the infected populations and over time for . A plot of the infected populations and over time for . Figs. 7(A) and 7(B) show time series of asymptomatic infected and symptomatic infected human populations for different values of the disease transmission rate among the dose-2 vaccinated susceptible population , i.e., , 0.5, and 0.7. The figure shows that the total infected cases in the and populations do not change much when increases. As a result, the disease does not spread rapidly among the susceptible population who have received both vaccine doses. This emphasises the importance of administering two doses to a susceptible population.
Fig. 7

A plot of the infected populations and over time for .

A plot of the infected populations and over time for . Figs. 8(A) and 8(B) show time series of asymptomatic infected and symptomatic infected human populations for different values of the dose-1 vaccination rate among the non-vaccinated susceptible population , such as , 0.5, and 0.7. The figures clearly show that when the dose-1 vaccination rate rises, the number of infected individuals in both populations drops. As a result, the dose-1 vaccination rate among the non-vaccinated susceptible population is critical in limiting disease spread.
Fig. 8

A plot of the infected populations and over time for .

A plot of the infected populations and over time for . Figs. 9(A) and 9(B) show time series of asymptomatic and symptomatic infected human populations for distinct values of the dose-2 vaccination rate within the dose-1 vaccinated susceptible population , such as , 0.5, and 0.7. The rise in the dose-2 vaccination rate reduces the number of infected cases in both populations, as seen in the figures. As a result, the dose-2 vaccination rate among the dose-1 vaccinated susceptible population is critical in limiting disease spread.
Fig. 9

A plot of the infected populations and over time for .

A plot of the infected populations and over time for . Figs. 10(A) and 10(B) show time series of asymptomatic and symptomatic infected human populations for various values of the booster dose vaccination rate among the dose-2 vaccinated susceptible population , such as , 0.3, and 0.95. It is apparent from these data that are increasing the booster dose vaccination rate in the dose-2 vaccinated susceptible population reduces the number of infected cases in both the populations and . These results demonstrate the relevance of delivering the booster dose vaccine in addition to the dose-2 vaccination among .
Fig. 10

A plot of the infected populations and over time for .

A plot of the infected populations and over time for . Figs. 11(A) and 11(B) show the time series of asymptomatic infected and symptomatic infected human populations for various values of the parameters, 0.3, 0.5, 0.7 and , 0.5, 0.7, respectively. The asymptomatic infected population drops steadily whenever the rate of infected individuals showing signs of the disease increases, as shown in Fig. 11(A), and hence, disease spread is minimised. Fig. 11(A) emphasises the need to employ suitable testing methods to detect asymptomatic infected persons. The symptomatic infected population is steadily reduced as the rate of infected persons without symptoms recovered from the disease increases, as shown in Fig. 11(B).
Fig. 11

A plot of the infected populations and over time for and respectively.

A plot of the infected populations and over time for and respectively.

Parameter estimation

The following values of parameters are used to analyse the effect of the OMICRON variant virus in India using our proposed mathematical model. The following approach is employed to estimate some parameter values and the preliminary values of eight populations. According to the most recent WHO data published in 2018 [10], males have a life expectancy of 67.4 years, and females have a life expectancy of 70.3 years, for a total life expectancy of 68.8 years. As a result, each population’s natural mortality rate is estimated to be deaths per day. According to UNICEF [11], there are approximately births per day in India. Therefore the recruitment rate is assumed as 70,000 births per day. The values of the parameters , , and are determined based on the vaccination administration speed, whereas , , and are chosen hypothetically and adjusted using the least square approach to fit our model with accurate data. The incubation period for COVID-19 disease caused by the Omicron variant virus is 2 to 4 days [12]. As a result, we assume that our model’s incubation time is three days, resulting in the value of the exposed individuals infected every day. Patients with COVID-19 caused by an omicron variant usually recover after five days [13]. As a result, is considered infected persons recovering per day. To fit our model with actual data, the parameters , , and are set hypothetically and changed using the least square approach. (A) The local stability of of the omicron model (1) for , (B) Global stability of disease free equilibrium shown in phase space for , (C) Susceptible population without vaccination against infected & asymptomatic population over time ‘t’ for , (D) Susceptible population without vaccination against infected & symptomatic population over time ‘t’ for , (E) Susceptible population & vaccinated with dose-1 against infected & asymptomatic population over time ‘t’ for , (F) Susceptible population & vaccinated with dose-2 against infected & asymptomatic population over time ‘t’ for , (G) Susceptible population & vaccinated with dose-1 against infected & symptomatic population over time ‘t’ for and (H) Susceptible population & vaccinated with dose-2 against infected & symptomatic population over time ‘t’ for .

Numerical analysis

This section carried out simulation tests to verify the analytically derived results. The proposed OMICRON model (1) has been subjected to simulations portraying local and global stability. The parameter values are taken from the Table 4, Table 5, respectively, for and .
Table 4

Parameter values for constructing Fig. 12.

ParametersΛβ1β2β3α1α2α3ξγδ1δ2σ1σ2
Values30.60.30.20.60.50.50.30.30.70.70.30.4
The DFE point ’s global and local stability has been numerically simulated and depicted in Fig. 12. The disease free equilibrium is found to be (3.33, 2.5, 1.5625, 2.60417, 0, 0, 0) and using the parameter values from Table 4. Hence for various initial conditions on the state variables near the equilibrium point , it is seen from the Fig. 12(A) that , , , , , and . From Fig. 12(C), it is seen that the populations and converge to and respectively as for initial points of state variables near . Similarly from Figs. 12(D), 12(E), 12(F), 12(G) and 12(H), it is seen that the state variables , , , and as respectively whenever the initial populations are chosen near . As stated in Theorem 3, the local stability of whenever is verified. From figure Fig. 12(B), it is noticed that for any initial conditions on the state variables , and in , the solution trajectories as . This convergence can be verified for all possible ordered triples out of the seven state variables. As stated in Theorem 5, is GAS in whenever is verified.
Fig. 12

(A) The local stability of of the omicron model (1) for , (B) Global stability of disease free equilibrium shown in phase space for , (C) Susceptible population without vaccination against infected & asymptomatic population over time ‘t’ for , (D) Susceptible population without vaccination against infected & symptomatic population over time ‘t’ for , (E) Susceptible population & vaccinated with dose-1 against infected & asymptomatic population over time ‘t’ for , (F) Susceptible population & vaccinated with dose-2 against infected & asymptomatic population over time ‘t’ for , (G) Susceptible population & vaccinated with dose-1 against infected & symptomatic population over time ‘t’ for and (H) Susceptible population & vaccinated with dose-2 against infected & symptomatic population over time ‘t’ for .

(A) The LAS of of the omicron system (1) for , (B) GAS of shown in phase plane for , (C) Susceptible population without vaccination against infected & asymptomatic population over time ‘t’ for , (D) Susceptible population without vaccination against infected & symptomatic population over time ‘t’ for , (E) Susceptible population & vaccinated with dose-1 against infected & asymptomatic population over time ‘t’ for , (F) Susceptible population & vaccinated with dose-2 against infected & asymptomatic population , (G) Susceptible population & vaccinated with dose-1 against infected & symptomatic population over time ‘t’ for and (H) Susceptible population & vaccinated with dose-2 against infected & symptomatic population over time ‘t’ for . The global and local stability of the endemic equilibrium has been numerically simulated and portrayed in the Fig. 13. The endemic equilibrium point is found to be (3.9933, 2.45477, 1.33795, 2.229917, 3.32537, 0.58683, 0.410781) and using the parameter values from Table 5. Hence for various initial conditions on the state variables near the equilibrium point , it is seen from the Fig. 13(A) that , , , , , and . From Fig. 13(C), it is seen that the populations and converges to and respectively as for initial points of state variable near . Similarly from the Figs. 13(D), 13(E), 13(F), 13(G) and 13(H) it is seen that the state variables , , , and as respectively whenever the initial populations are chosen near . Further the necessary and sufficient conditions stated in the Theorem 6, say , , , and with , , , , , are satisfied. As stated in Theorem 6, the LAS of the point is verified whenever . From Fig. 13(B), it is noticed that for any initial conditions on the state variables , and in , the solution trajectories as . This convergence can be verified for all possible ordered triples out of the seven state variables. As stated in Theorem 7, it is verified that is GAS in when .
Fig. 13

(A) The LAS of of the omicron system (1) for , (B) GAS of shown in phase plane for , (C) Susceptible population without vaccination against infected & asymptomatic population over time ‘t’ for , (D) Susceptible population without vaccination against infected & symptomatic population over time ‘t’ for , (E) Susceptible population & vaccinated with dose-1 against infected & asymptomatic population over time ‘t’ for , (F) Susceptible population & vaccinated with dose-2 against infected & asymptomatic population , (G) Susceptible population & vaccinated with dose-1 against infected & symptomatic population over time ‘t’ for and (H) Susceptible population & vaccinated with dose-2 against infected & symptomatic population over time ‘t’ for .

According to WHO data as of December 28th, 2021, the initial susceptible vaccination populations of dose-1 and dose-2 and active OMICRON-infected populations are assumed to be , , , respectively. The remaining initial populations are hypothetically chosen for numerical simulation as follows: , , , , and . Table 6 summarises the real-time symptomatic infected populations from 29th December 2021 to 20th February 2022.
Table 6

Real confirmed COVID-19 infected cases in the Indian population.

Date29-12-202130-12-202131-12-20211-1-20222-1-20223-1-2022
Active cases8615895214109995130000152690179098

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Date15-2-202216-2-202217-2-202218-2-202219-2-202220-2-2022
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Parameter values with assumed and real field values used in constructing the Fig. 14, Fig. 15, Fig. 16, Fig. 17.
Fig. 14

The BRN plotted against (a) dose-1 vaccination rate , (b) dose-2 vaccination rate , (c) booster dose vaccination rate , (d) disease transmission rate of non-vaccinated population , (e) disease transmission rate of dose-1 vaccinated population , (f) disease transmission rate of dose-2 vaccinated population , (g) rate of exposed population who are asymptomatic , (h) rate of asymptomatic infected population become symptomatic to disease , (j) rate of asymptomatic infected population getting recovered .

Fig. 15

Fitted with real data from Table 6 and values of parameters from Table 3, plot of (a) asymptomatic infected populations and (b) symptomatic infected populations against time t.

Fig. 16

A plot of the infected populations and over time various values of the booster dose vaccination rate among the dose-2 vaccinated susceptible population and disease transmission rate of dose-2 vaccinated susceptible population .

Fig. 17

For different values of the infection rate and the recovered rate from the disease of asymptomatic infected persons , a time-series graph of asymptomatic infected and symptomatic infected populations is shown.

Parameter values for constructing Fig. 12. Parameter values for constructing Fig. 13. Real confirmed COVID-19 infected cases in the Indian population. The BRN plotted against (a) dose-1 vaccination rate , (b) dose-2 vaccination rate , (c) booster dose vaccination rate , (d) disease transmission rate of non-vaccinated population , (e) disease transmission rate of dose-1 vaccinated population , (f) disease transmission rate of dose-2 vaccinated population , (g) rate of exposed population who are asymptomatic , (h) rate of asymptomatic infected population become symptomatic to disease , (j) rate of asymptomatic infected population getting recovered . The infected population of the model (1) fits well with the real confirmed infected cases in India from the Table 6 with the parameter values estimated as in the Table 3, as shown in Fig. 15(b).
Table 3

Parameter values with assumed and real field values used in constructing the Fig. 14, Fig. 15, Fig. 16, Fig. 17.

ParametersValuesSource
Λ70000[11]
α10.0085assumed
α20.012assumed
α30.0001assumed
β12×1010assumed
β22×1010assumed
β31×109assumed
γ0.33[12]
δ10.0012assumed
δ20.2[13]
σ10.1assumed
σ20.00001assumed
ξ0.00004[10]
The infected populations and of the model (1) decrease when the booster dose vaccination rate increases, as shown in Figs. 16(a) and 16(b). The asymptomatic infected population and the symptomatic infected population steadily increase when the disease transmission rate among dose-2 vaccinated individuals increases, as shown in Figs. 16(c) and 16(d). From Figs. 17(a) and 17(b), it is seen that the populations and of the model (1) increase when the infection rate of the exposed individuals increases. From Figs. 17(c) and 17(d), it is seen that the infected populations and of the model (1) are reduced when the rate of recovery of the population increases. Therefore, rapid recovery of the population from the disease is crucial to reducing the rapid spread of the disease. Fitted with real data from Table 6 and values of parameters from Table 3, plot of (a) asymptomatic infected populations and (b) symptomatic infected populations against time t. A plot of the infected populations and over time various values of the booster dose vaccination rate among the dose-2 vaccinated susceptible population and disease transmission rate of dose-2 vaccinated susceptible population . For different values of the infection rate and the recovered rate from the disease of asymptomatic infected persons , a time-series graph of asymptomatic infected and symptomatic infected populations is shown.

Conclusion

A COVID-19 mathematical model was developed for studying the disease transmission dynamics in India when a vaccination program is underway and the omicron variant of the coronavirus is dominant. According to the research, the Omicron system (1)’s DFE is LAS when the basic reproduction number is below one but unstable otherwise. The stability of the equilibrium points was tested after the basic reproduction number, , was computed. The system (1) exhibits forward bifurcation at when (38). The sensitivity parameters were calculated using the notion of normalised forward sensitivity. The time-series graphs for various populations with assumed parameter values are created in the numerical analysis section to validate the results of the stability theorems. Different model parameters are determined based on current omicron variant transmission among various susceptible populations, divided into groups based on vaccination dosage. The estimated values are used to examine variations in the value of the threshold parameter, , to the model’s most essential parameters. The sensitivity analysis is performed, and the most sensitive parameters are identified. The numerical experiments are carried out using estimated parameter values for real infected cases in the Indian population during the omicron variant virus transmission and vaccination drive in India, and it is found that the model (1)’s symptomatic infected population matches the real infected data well. Finally, some of the key estimated parameters are examined using time series graphs of the model (1)’s infected populations. In future research, we will look at this model with a non-human reservoir compartment for the omicron virus, investigate its dynamics, and compare the results to real-world data.
Table 2

Sensitivity values of .

ParametersΛβ1β2β3α1α2α3ξγδ1δ2
Sign of sensitivity index of R0
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