Literature DB >> 35910434

Consensus genetic map and QTLs for morphological and agronomical traits in mungbean using DArT markers.

Thi Thuy Hang Vu1,2, Adrzeij Kilian3, Jason Carling3, Robert John Lawn1,4.   

Abstract

Mungbean is an important but understudied food legume compared with other major grain crops. Genetic studies through development of high-through put markers, linkage map construction and QTL analysis can accelerate and improve the efficiency of mining for genes for breeding in this crop. This study used four mungbean F5 recombinant inbred lines (RILs) from crosses of two wild types (ACC 1, ACC 87) and two cultivars (Berken, Kiloga) and DArT markers to construct individual and consensus linkage maps and to identify QTLs associated with 54 traits in mungbean. The number of polymorphic DArT markers identified among the four RIL populations varied from 1062 to 2013. The individual maps covered the lengths of 629.7-883.5 cM, comprising 672-981 DArT markers and 15-19 linkage groups (LG) with average distance between markers of 0.9-1.2 cM. The consensus map had the total length of 795.3 cM, comprising 1539 DArT markers and resolved 11 LGs with an average inter-marker distance of 0.65 cM. Sixty-two QTLs were identified for 39 traits across 10 LGs of the consensus map. Major QTLs were identified for two special traits, late flowering inherited from ACC 1 (6 QTLs, PVE of 11.2-29.9%) and perenniality inherited from ACC 87 (3 QTLs, PVE of 17.4-22.6%) in separate population analysis. Number of congruent QTLs across four mungbean populations and the consensus map was 18 for 13 traits. These results illustrated the high efficiency of DArT marker application in mungbean genetic dissection and suggested the future potential employment of identified QTLs for mungbean improvement. © Prof. H.S. Srivastava Foundation for Science and Society 2022.

Entities:  

Keywords:  Consensus map; DArT; Improvement; QTLs; Vigna radiata

Year:  2022        PMID: 35910434      PMCID: PMC9334499          DOI: 10.1007/s12298-022-01201-8

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  31 in total

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Journal:  Mol Genet Genomics       Date:  2005-07-16       Impact factor: 3.291

2.  High segregation distortion in maize B73 x teosinte crosses.

Authors:  G Wang; Q Q He; Z K Xu; R T Song
Journal:  Genet Mol Res       Date:  2012-03-19

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Authors:  N D Young; D Danesh; D Menancio-Hautea; L Kumar
Journal:  Theor Appl Genet       Date:  1993-10       Impact factor: 5.699

4.  Development of a mungbean ( Vigna radiata) RFLP linkage map and its comparison with lablab ( Lablab purpureus) reveals a high level of colinearity between the two genomes.

Authors:  E. Humphry; V. Konduri; J. Lambrides; T. Magner; L. McIntyre; B. Aitken; J. Liu
Journal:  Theor Appl Genet       Date:  2002-05-23       Impact factor: 5.699

5.  Identification of a major locus conferring resistance to powdery mildew (Erysiphe polygoni DC) in mungbean (Vigna radiata L. Wilczek) by QTL analysis.

Authors:  M E Humphry; T Magner; C L McIntyre; E A B Aitken; C J Liu
Journal:  Genome       Date:  2003-10       Impact factor: 2.166

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Journal:  Nat Commun       Date:  2014-11-11       Impact factor: 14.919

7.  Selection of candidate genes controlling veraison time in grapevine through integration of meta-QTL and transcriptomic data.

Authors:  Pietro Delfino; Sara Zenoni; Zahra Imanifard; Giovanni Battista Tornielli; Diana Bellin
Journal:  BMC Genomics       Date:  2019-10-15       Impact factor: 3.969

8.  Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

Authors:  César D Petroli; Carolina P Sansaloni; Jason Carling; Dorothy A Steane; René E Vaillancourt; Alexander A Myburg; Orzenil Bonfim da Silva; Georgios Joannis Pappas; Andrzej Kilian; Dario Grattapaglia
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

9.  Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph.

Authors:  Yonghui Wu; Prasanna R Bhat; Timothy J Close; Stefano Lonardi
Journal:  PLoS Genet       Date:  2008-10-10       Impact factor: 5.917

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