| Literature DB >> 35904228 |
Avinaash Maharaj1, Ruth Kwong1, Jack Williams1, Christopher Smith1, Helen Storr1, Ruth Krone2, Debora Braslavsky3, Maria Clemente4, Nanik Ram5, Indraneel Banerjee6, Semra Çetinkaya7, Federica Buonocore8, Tülay Güran9, John C Achermann8, Louise Metherell1, Rathi Prasad1.
Abstract
Sphingosine-1-phosphate lyase (SGPL1) insufficiency syndrome (SPLIS) is an autosomal recessive multi-system disorder, which mainly incorporates steroid-resistant nephrotic syndrome and primary adrenal insufficiency. Other variable endocrine manifestations are described. In this study, we aimed to comprehensively annotate the endocrinopathies associated with pathogenic SGPL1 variants and assess for genotype-phenotype correlations by retrospectively reviewing the reports of endocrine disease within our patient cohort and all published cases in the wider literature up to February 2022. Glucocorticoid insufficiency in early childhood is the most common endocrine manifestation affecting 64% of the 50 patients reported with SPLIS, and a third of these individuals have additional mineralocorticoid deficiency. While most individuals also have nephrotic syndrome, SGPL1 variants also account for isolated adrenal insufficiency at presentation. Primary gonadal insufficiency, manifesting with microphallus and cryptorchidism, is reported in less than one-third of affected boys, all with concomitant adrenal disease. Mild primary hypothyroidism affects approximately a third of patients. There is paucity of data on the impact of SGPL1 deficiency on growth, and pubertal development, limited by the early and high mortality rate (approximately 50%). There is no clear genotype-phenotype correlation overall in the syndrome, with variable disease penetrance within individual kindreds. However, with regards to endocrine phenotype, the most prevalent disease variant p.R222Q (affecting 22%) is most consistently associated with isolated glucocorticoid deficiency. To conclude, SPLIS is associated with significant multiple endocrine disorders. While endocrinopathy in the syndrome generally presents in infancy, late-onset disease also occurs. Screening for these is therefore warranted both at diagnosis and through follow-up.Entities:
Keywords: SGPL1; primary adrenal insufficiency; primary gonadal insufficiency; primary hypothyroidism; sphingolipids; sphingosine-1-phosphate lyase
Year: 2022 PMID: 35904228 PMCID: PMC9346324 DOI: 10.1530/EC-22-0250
Source DB: PubMed Journal: Endocr Connect ISSN: 2049-3614 Impact factor: 3.221
Figure 1Phenotypic spectrum of human disease characterized by SGPL1 deficiency. A total of 50 patients have been reported, numbers manifesting each phenotype in parentheses. *Including those with adrenal calcifications alone; †Four further reports of fetal demise. This figure was created using modified images from Servier free medical art (https://smart.servier.com/).
Figure 2Overview of sphingolipid metabolism. Sphingolipid metabolism begins with a common entry point and exit via a single degradative pathway. SPT, serine palmitoyl transferase; KDHSR, ketodihydrosphingosine reductase; CERS, ceramide synthase; DES, dihydroceramide desaturase; SMase, sphingomylinease; SMS, sphingomyelin synthase; CK, ceramide kinase; C1PP, ceramide-1-phosphate phosphatase; CDase, ceramidase; SK, sphingosine kinase; SPPase, sphingosine-1-phosphate phosphatase; SGPL1, sphingosine-1-phosphate lyase.
Figure 3Adrenal disease, primary gonadal insufficiency and primary hypothyroidism are present variably in 38 SPLIS patients with endocrinopathy.
Published SPLIS adrenal clinical phenotype (patients 1–37).
| Pt no. | Ethnicity | Sex | PAI presentation (age in years) | Glucocorticoid deficiency (Y/N) | Mineralocorticoid deficiency (Y/N) | Adrenal findings on imaging | Publication | ||
|---|---|---|---|---|---|---|---|---|---|
| 1 | c.7dup, p.S3Kfs*11 | Spanish Roma | M | 1.6 | Y | U | Calcifications | Lovric (3) | |
| 2 | c.7dup, p.S3Kfs*11 | Spanish Roma | F | 11 | Y | U | U | Lovric (3) | |
| 3† | c.7dup, p.S3Kfs*11 | Spanish Roma | F | 9 | Y | N | U | Prasad (4) | |
| 4† | c.261+1G | Peruvian | M | 0.9 | Y | Y | Enlarged, calcifications | Prasad (4) | |
| 5† | c.261+1G | Peruvian | F | 0.3 | Y | Y | Calcifications | Prasad (4) | |
| 6 | c.395A>G, p.E132G; c.832delA, p.R278Gfs*17 | French | F | 2 | Y | U | U | Lovric (3) | |
| 7 | c.395A > G, p.E132G; c.832delA, p.R278Gfs*17 | French | F | 2 | Y | U | U | Lovric (3) | |
| 8† | c.511A>G, p.N171D | Pakistani | M | 0.6 | Y | Y | Calcifications | Maharaj (7) | |
| 9† | c.518T>A, p.L173Q | Turkish | F | 0.17 | Y | Y | Calcifications | Menevse (20) | |
| 10 | c.605C>T, p. S202L; c.1247A>G, p.Y416C | Unknown | M | 2 | Y | N | U | Zhao (10) | |
| 11 | c.664C>T, p.R222W | Turkish | F | 0.25 | Y | U | U | Lovric (3) | |
| 12 | c.664C>T, p.R222Q | Pakistani | M | 6.5 | Y | U | U | Lovric (3) | |
| 13 | c.664C>T, p.R222Q | Pakistani | M | 3 | Y | U | U | Lovric (3) | |
| 14 | c.664C>T, p.R222Q | Pakistani | M | 2 | Y | U | U | Lovric (3) | |
| 15† | c.664C>T, p.R222Q | Pakistani | M | 0.6 | Y | N | U | Prasad (4) | |
| 16† | c.664C>T, p.R222Q | Pakistani | M | <1 | Y | N | U | Prasad (4) | |
| 17† | c.664C>T, p.R222Q | Pakistani | M | <1 | Y | N | U | Prasad (4) | |
| 18† | c.664C>T, p.R222Q | Saudi | M | 1.5 | Y | N | U | Prasad (4) | |
| 19 | c.665G>A, p. R222Q | Saudi | M | 3 | Y | N | Normal | Settas (17) | |
| 20 | c.665G>A, p.R222Q | Saudi | M | 6 | Y | Y | U | Martin (8) | |
| 21 | c.665G>A: p.R222Q | Saudi/British | M | 1 | Y | U | U | Alrayes (19) | |
| 22 | c.868T>c, p.F290L; c.993C<G, p.Y331* | White American | M | 1.2 | Y | N | Calcification and enlarged | Taylor (9) | |
| 23 | c.934delC, p. L312Yfs*30 | White European | M | 0 | Y | U | Calcifications | Janecke (2) | |
| 24 | c.1018C >T, p.R340W | Unknown | F | 0.6 | Y | Y | U | Linhares (6) | |
| 25 | c.1018C >T, p.R340W | Unknown | M | 0.7 | Y | Y | U | Linhares (6) | |
| 26† | c.1018C >T, p.R340W | Turkish | M | 0.4 | Y | Y | Normal | Menevse (20) | |
| 27 | c.1037G >T, p.S346I | Moroccan | F | NFD | U | U | Calcifications | Lovric (3) | |
| 28 | c.1037G >T, p.S346I | Moroccan | F | NFD | U | U | Calcifications | Lovric (3) | |
| 29† | c.1049A>G, p.D350G | Turkish | F | 0.75 | Y | Y | Calcifications | Maharaj (21) | |
| 30 | c.1077del, p.G360Afs*49; c.1058A>G, p. K353R | Unknown | M | 0.1 | Y | U | Calcifications | Zhao (10) | |
| 31 | c.1079G>T, p.G360V | Turkish | F | 0.4 | Y | U | U | Saygili (18) | |
| 32 | c.1233delC, p.F411Lfs*56 | Afghan | M | NFD | U | U | Calcifications | Bamborschke (5) | |
| 33 | c.1247A >G, p.Y416C | Mixed European | F | 0.2 | Y | U | U | Lovric (3) | |
| 34 | c.1513C >T, p.R505* | Arabic | M | NFD | U | U | Calcifications (scan at 6 weeks of life) | Janecke (2) | |
| 35 | c.1513C >T, p.R505* | Arabic | M | NFD | U | U | Calcifications (antenatal scan at 21 weeks gestation) | Janecke (2) | |
| 36 | c.1566+2T>C; c.854G>A p.C285Y | Unknown | M | 0.1 | Y | U | Calcifications | Zhao (10) | |
| 37† | c.1633_1635delTTC, p.F545del | Turkish | F | 0.5 | Y | Y | Normal | Prasad (4) | |
Patients numbered according to position of SGPL1 pathogenic variant.
†Patients referred to the QMUL cohort.
N, no; NFD, not formally diagnosed (however adrenal calcifications reported); PAI, primary adrenal insufficiency; U, unknown; Y, yes.
Published SPLIS gonadal clinical phenotype, in all cases, the phenotype was noted post-birth/in early infancy.
| Pt no. | Ethnicity | Sex | Concomitant adrenal disease (Y/N) | Microphallus (Y/N) | Cryptorchidism (Y/N) | LH/FSH at presentation | HCG testing /LHRH and result | Anti-Müllerian hormone level | Publication | |
|---|---|---|---|---|---|---|---|---|---|---|
| 4† | c.261+1G | Peruvian | M | Y | Y | Bilateral | Raised (LH 36 IU/L, FSH 58 IU/L) | U | 40 pmol/L (NR 600–2000, ECLIA) | Prasad (4) |
| 8† | c.511A>G, p.N171D | Pakistani | M | Y | Y | Bilateral | Raised (LH 27 IU/L, FSH 71 IU/L) | No response in testosterone (1.0 nmol/L day 1, 0.9 nmol/L day 3) to hCG stimulation, ‘flat’ androstenedione and DHT response | U | Maharaj (7) |
| 22 | c.868T>c, p.F290L; c.993C<G, p.Y331* | White American | M | Y | Y | Bilateral | Raised (LH 23 IU/L, FSH 41 IU/L) | U | U | Taylor (9) |
| 23 | c.934delC, p. L312Yfs*30 | White European | M | Y | Y | Bilateral | Raised* | U | U | Janecke (2) |
| 26† | c.1018C >T, p.R340W | Turkish | M | Y | N | Bilateral | Raised (LH 52.6 IU/L, FSH 71.5 IU/L) | U | 11.6 ng/mL (NR 14–466) | Menevse (20) |
| 31 | c.1233delC, p.F411Lfs*56 | Afghan | M | Y | N | Bilateral | U | U | U | Bamborshke (5) |
| 34 | c.1513C >T, p.R505* | Arabic | M | Y | Y | Bilateral | Raised* | Lack of testosterone response to hCG stimulation*; exaggerated gonadotrophin response to LHRH | Low* | Janecke (2) |
| 35 | c.1513C >T, p.R505* | Arabic | M | Y | Y | Bilateral | Raised* | Lack of testosterone response to hCG stimulation*; exaggerated gonadotrophin response to LHRH | Low* | Janecke (2) |
| 36 | c.1566+2T>C; c.854G>A, C285Y | Unknown | M | Y | Y | U | U | U | U | Zhao (10) |
Patient numbers correspond to numbers allocated for PAI phenotype in Table 1.
*Details of results not published;†Patients referred to the QMUL cohort.
FSH, follicle-stimulating hormone; hCG, human chorionic gonadotropin; LH, luteinizing hormone; LHRH, luteinizing hormone releasing hormone; N, no; U, unknown; Y, yes.
Thyroid clinical phenotype reported in SPLIS patients.
| Pt no. | Ethnicity | Sex | Age of thyroid presentation (age in years) | TSH at diagnosis (mIU/L) | Free T4 at diagnosis (pmol/L) | TPO antibody status | Thyroid US findings | Concomitant adrenal disease (Y/N) | Concomitant SRNS (Y/N) | Publication | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 3† | c.7dup (p.S3Kfs*11) | Spanish Roma | F | 12 | 12 | 19 | U | Normal | Y | Y | Prasad (4) |
| 4† | c.261+1G | Peruvian | M | 1 | 12.9 | 11.6 | Negative | Normal | Y | Y | Prasad (4) |
| 5† | c.261+1G | Peruvian | F | 0.3 | 8.14 | 13.5 | Negative | Normal | Y | Y | Prasad (4) |
| 8† | c.511A>G, p.N171D | Pakistani | M | 0.23 | 25 | 10.7 | U | Normal | Y | Y | Maharaj (7) |
| 9† | c.518T>A, p.L173Q | Turkish | F | 0.17 | 18 | 10.4 | U | U | Y | Y | Menevse (20) |
| 22 | c.868T>C, p.F290L; c.99993C>G, p.Y331* | White American | M | 0.18 | 13.3 | 18 | U | Normal | Y | Y | Taylor (9) |
| 26† | c.1018C >T, p.R340W | Turkish | M | 0.4 | 9.2 | 12.6 | U | U | Y | Y | Menevse (20) |
| 27 | c.1037G >T, p.S346I | Moroccan | F | U | U | U | U | U | Y | Y | Lovric (3) |
| 28 | c.1037G >T, p.S346I | Moroccan | F | U | U | U | U | U | Y | Y | Lovric (3) |
| 29† | c.1049A>G, p.D350G | Turkish | F | 11 | 8.2 | 10.5 | Negative | Psammomatous calcified thyroglossal cyst, normal thyroid architecture | Y | N | Maharaj (21) |
| 31 | c.1079G>T, p.G360V | Turkish | F | 0.3 | U | U | U | U | Y | Y | Saygili (18) |
| 32 | c.1233delC, p.F411Lfs*56 | Afghan | M | 0.06 | 29.2 | 4.5 | U | U | Y | Y | Bamborschke (5) |
| 33 | c.1247A >G, p.Y416C | Mixed European | F | 0.17 | U | U | U | U | Y | Y | Lovric (3) |
| 36 | c.1566+2T>C; c.854G>A; p.C285Y | Unknown | M | <0.1 | U | U | U | U | Y | Y | Zhao (10) |
| 37† | c.1633_1635delTTC, p.F545del | Turkish | F | U | 20.3 | 13.8 | Negative | Goitre | Y | Y | Prasad (4) |
| 38 | c.605C > T, p.S202L; c.946G>A, p.A316T | Mixed European | M | U | Raised* | U | U | U | N | Y | Lovric (3) |
Patient numbers correspond to numbers allocated for PAI phenotype in Table 1.
*Details of results not published; †Patients referred to the QMUL cohort.
N, no; T4, thyroxine; TPO, thyroid peroxidase; TSH, thyroid-stimulating hormone; U, unknown; US, ultrasound; Y, yes.
Figure 4Domain topology of reported pathogenic variants in SGPL1 and delineation of associated endocrinopathy. Numbers of patients associated with each genotype/phenotype are included in parantheses. †Also includes patients with adrenal calcification where biochemical PAI has not been defined. *Includes a case of fetal demise.