Literature DB >> 35895218

Photopolymerization with EDTA and Riboflavin for Proteins Analysis in Polyacrylamide Gel Electrophoresis.

Volodymyr Shlyakhovenko1, Olena Samoylenko2.   

Abstract

A new method for photosensitized polymerization of polyacrylamide gels was proposed. Photopolymerization of acrylamide/N,N'-methylenebisacrylamide (AM/Bis) was assisted with combination of catalyst ethylenediaminetetraacetic acid disodium salt dihydrate (EDTA) and photoinitiator riboflavin (RF). The prepared cross-linked AM/Bis + EDTA/RF gels were tested in electrophoretic SDS-PAGE system at high concentration of AM (20 wt%). The efficiency of these systems for electrophoretic separation of histones of human blood lymphocytes was demonstrated. In principle, such gels with small pores in the separation zone can offer advantages for resolution of proteins. The advantages of proposed method also include simple technique and possibility of gel preparation in a timely manner (for 10-15 min). However, in microporous gel systems some limitations in electroblotting technique could occur, which is particularly crucial for hydrophobic proteins.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Biomarkers; Cancer; Electrophoresis; Leukaemia/lymphoma; Photopolymerization; Riboflavin; Separation of proteins

Mesh:

Substances:

Year:  2022        PMID: 35895218     DOI: 10.1007/s10930-022-10068-3

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   4.000


  16 in total

Review 1.  Capillary electrophoresis and isoelectric focusing in peptide and protein analysis.

Authors:  Pier Giorgio Righetti; Roberto Sebastiano; Attilio Citterio
Journal:  Proteomics       Date:  2012-12-23       Impact factor: 3.984

2.  A 'green' approach to fixing polyacrylamide gels.

Authors:  Katrina Carbonara; Jens R Coorssen
Journal:  Anal Biochem       Date:  2020-07-17       Impact factor: 3.365

3.  The acid extraction of histones from calf thymus deoxyribonucleoprotein.

Authors:  K Murray
Journal:  J Mol Biol       Date:  1966-02       Impact factor: 5.469

4.  Crystal violet stains proteins in SDS-PAGE gels and zymograms.

Authors:  Robert G E Krause; J P Dean Goldring
Journal:  Anal Biochem       Date:  2018-11-17       Impact factor: 3.365

5.  Photopolymerization of polyacrylamide gels with methylene blue.

Authors:  T Lyubimova; S Caglio; C Gelfi; P G Righetti; T Rabilloud
Journal:  Electrophoresis       Date:  1993 Jan-Feb       Impact factor: 3.535

6.  Micropreparative one- and two-dimensional electrophoresis: improvement with new photopolymerization systems.

Authors:  T Rabilloud; M Vincon; J Garin
Journal:  Electrophoresis       Date:  1995-08       Impact factor: 3.535

7.  Dual crosslinked alginate hydrogels by riboflavin as photoinitiator.

Authors:  Eunu Kim; Min Hee Kim; Jae Hwang Song; Chan Kang; Won Ho Park
Journal:  Int J Biol Macromol       Date:  2020-03-16       Impact factor: 6.953

Review 8.  Bottom-up and top-down proteomic approaches for the identification, characterization, and quantification of the low molecular weight proteome with focus on short open reading frame-encoded peptides.

Authors:  Liam Cassidy; Philipp T Kaulich; Sandra Maaß; Jürgen Bartel; Dörte Becher; Andreas Tholey
Journal:  Proteomics       Date:  2021-06-26       Impact factor: 3.984

Review 9.  Rationale for the Successful Management of EDTA Chelation Therapy in Human Burden by Toxic Metals.

Authors:  Maria Elena Ferrero
Journal:  Biomed Res Int       Date:  2016-11-08       Impact factor: 3.411

Review 10.  Photo, thermal and chemical degradation of riboflavin.

Authors:  Muhammad Ali Sheraz; Sadia Hafeez Kazi; Sofia Ahmed; Zubair Anwar; Iqbal Ahmad
Journal:  Beilstein J Org Chem       Date:  2014-08-26       Impact factor: 2.883

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