| Literature DB >> 35891332 |
Lucca R Policastro1, Isabela Dolci1, Andre S Godoy1, José V J Silva Júnior2,3, Uriel E A Ruiz4, Igor A Santos4, Ana C G Jardim4,5, Kirandeep Samby6, Jeremy N Burrows6, Timothy N C Wells6, Laura H V G Gil7, Glaucius Oliva1, Rafaela S Fernandes1.
Abstract
Chikungunya virus (CHIKV) is the causative agent of chikungunya fever, a disabling disease that can cause long-term severe arthritis. Since the last large CHIKV outbreak in 2015, the reemergence of the virus represents a serious public health concern. The morbidity associated with viral infection emphasizes the need for the development of specific anti-CHIKV drugs. Herein, we describe the development and characterization of a CHIKV reporter replicon cell line and its use in replicon-based screenings. We tested 960 compounds from MMV/DNDi Open Box libraries and identified four candidates with interesting antiviral activities, which were confirmed in viral infection assays employing CHIKV-nanoluc and BHK-21 cells. The most noteworthy compound identified was itraconazole (ITZ), an orally available, safe, and cheap antifungal, that showed high selectivity indexes of >312 and >294 in both replicon-based and viral infection assays, respectively. The antiviral activity of this molecule has been described against positive-sense single stranded RNA viruses (+ssRNA) and was related to cholesterol metabolism that could affect the formation of the replication organelles. Although its precise mechanism of action against CHIKV still needs to be elucidated, our results demonstrate that ITZ is a potent inhibitor of the viral replication that could be repurposed as a broad-spectrum antiviral.Entities:
Keywords: Chikungunya virus; Itraconazole; antiviral; drug development; replicon-based assays
Mesh:
Substances:
Year: 2022 PMID: 35891332 PMCID: PMC9317443 DOI: 10.3390/v14071351
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.818
Oligonucleotides used to construct rep-GLuc-nsP-CHIKV-99659.
| Oligonucleotide | Sequence (5′-3′) | Amplicon |
|---|---|---|
| pBSC-BamHI-T7Phi2.5- 5′CHIKV-F a | b,c | Fragment 1 |
| CHIKV-7515R | ||
| CHIKV1-GLuc-F | d | Fragment 2 |
| GLuc-Ubiq-R | ||
| Ubiq-F | Fragment 3 | |
| CHIKV1-Neo-R | ||
| CHIKV-3UTR-F |
| Fragment 4 |
| pBSC-SpeI-3′CHIKV-R |
a Oligonucleotides pBSC-BamHI-T7Phi2.5-5′CHIKV-F and CHIKV-3′UTR-R (5′-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATTAAAAACAAAATAACATCTCCTACGTCCCTATGGGTAC-3′) were used in full-length PCR; b Nucleotides used for homologous recombination are in bold; c The T7 RNA polymerase promoter is underlined; d The CHIKV subgenomic promoter is in italics.
Figure 1Development and characterization of the BHK-21-GLuc-nsP-CHIKV-99659 cell line. (A) Schematic representation of rep-GLuc-nsP-CHIKV-99659 construction. The ligation of fragments 1 and 4 to the pBSC-HDR vector was driven by homologous sequences inserted by the oligonucleotides pBSC-BamHI-T7Phi2.5-5′CHIKV-F and pBSC-SpeI-3′CHIKV-R, respectively (see Table 1). The dashed areas correspond to the overlapping regions between the fragments. The numbers in fragment 1 (1 to 7515 nt), 2 (7490 to 8133 nt), 3 (8110 to 9179 nt), and 4 (9142 to 9892 nt) correspond to the positions in rep-GLuc-nsP-CHIKV-99659. The arrows correspond to transcription driven by the T7 RNA polymerase promoter and the CHIKV genomic (at 5′UTR) and subgenomic promoters (SGP). a The sequence in pBSC-SpeI-3′CHIKV-R corresponds to the reverse complement (Table 1). (B) Comparison of GLuc activity between passages 3 and 13 of the BHK-21-GLuc-nsP-CHIKV-99659 cell line. The cells’ supernatants were subjected to luciferase activity assay to test replicon stability throughout cultivation. (C) Antiviral assays of suramin in a 96-well plate format. Replicon cells were incubated with the inhibitor in a serial dilution for 48 h and both the GLuc signal (black squares) and cell viability (gray circles) were measured from the supernatant. Average results of two independent experiments. Error bars represent standard deviations.
Figure 2Replicon-based HTS for the COVID Box, Pandemic Response Box (PRB), and Pathogen Box. Scatter plots for the screening results of the 960 compounds in the primary screenings at 10 µM. In y-axis, the relative GLuc activity inhibition, and in x-axis, the relative cell viability. Selected compounds are highlighted in red and identified by their MMV code.
Figure 3Concentration–response curves (EC50 and CC50) of selected compounds. The CHIKV replicon cells were treated with compounds at 2-fold (Itraconazole) or 5-fold (GSK-983, rubitecan, and MMV676270) serial dilutions for 48 h. GLuc signal (black squares) was measured from the supernatant, while cell viability (gray circles) was measured employing MTT assay. Average results of two independent experiments. Error bars represent standard deviations.
Activity of azoles against CHIKV replicon replication.
| Compound | GLuc Inhibition | Cell Viability |
|---|---|---|
| Voriconazole | 13.9% | 91.8% |
| Econazole | 43.8% | 81.8% |
| Tioconazole | 54.8% | 68.4% |
| Clotrimazole | 70.7% | 70.2% |
| Ketoconazole | 0% | 100% |
| Fluconazole | 0% | 94.3% |
| Posaconazole | 11.8% | 100% |
| Ravuconazole | 25.4% | 100% |
| Isavuconazole | 28.6% | 100% |
| Miconazole | 27.8% | 100% |
The luciferase activity inhibition and cell viability of the ten azoles evaluated in the primary replicon-based screenings at 10 µM are shown.
Figure 4Inhibition of CHIKV-nanoluc infection in vitro. Concentration–response curves of selected compounds showing the relative replication rate (y-axis) over the compound concentration in log scale (x-axis). Average results of three independent experiments, each measured in triplicates, are shown, and error bars represent standard deviations.