| Literature DB >> 35886040 |
Takehito Sugasawa1,2, Yasuharu Kanki1,2, Ritsuko Komine2,3, Koichi Watanabe4, Kazuhiro Takekoshi1.
Abstract
The World Anti-Doping Agency (WADA) has prohibited the use of autologous blood transfusion (ABT) as a doping method by athletes. It is difficult to detect this doping method in laboratory tests, and a robust testing method has not yet been established. We conducted an animal experiment and used total RNA sequencing (RNA-Seq) to identify novel RNA markers to detect ABT doping within red blood cells (RBCs) as a pilot study before human trials. This study used whole blood samples from Wistar rats. The whole blood samples were mixed with a citrate-phosphate-dextrose solution with adenine (CPDA) and then stored in a refrigerator at 4 °C for 0 (control), 10, or 20 days. After each storage period, total RNA-Seq and bioinformatics were performed following RNA extraction and the purification of the RBCs. In the results, clear patterns of expression fluctuations were observed depending on the storage period, and it was found that there were large numbers of genes whose expression decreased in the 10- and 20-day periods compared to the control. Moreover, additional bioinformatic analysis identified three significant genes whose expression levels were drastically decreased according to the storage period. These results provide novel insights that may allow future studies to develop a testing method for ABT doping.Entities:
Keywords: RNA sequencing; autologous blood transfusion; blood; doping
Mesh:
Substances:
Year: 2022 PMID: 35886040 PMCID: PMC9317427 DOI: 10.3390/genes13071255
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Figure 1Purification method for RBCs in this study.
Figure 2Electrophoresis patterns of the RNAs from RBCs in each storage condition. (A) Gel image and (B) histogram in the Bioanalyzer.
Figure 3Overall expression profiles of the three storage conditions. (A) Phylogenetic tree, (B) PCA plot, (C) heat map filtered by FDR p-value < 0.0001 in ANOVA-like test, (D) number of DEGs in the clusters, and (E) box plot for each cluster. C1–C4: clusters 1–4. * p < 0.05, **** p < 0.0001.
Figure 4Identification of four candidate RNA markers in RBCs. (A) Venn diagram including conditions as follows: 4-fold change in averaged TPM values at 10 d, 10-fold change in averaged TPM values at 20 d, and maximum averaged TPM value > 10. (B) A scatter plot between Cont and 10 d. (C) A scatter plot between Cont and 20 d. The color dots show 4 genes of the candidate RNA markers obtained from the Venn diagram analysis. (D) A table including each characteristic of each candidate RNA marker.
Figure 5Confirmations of reproducibility using the qPCR assay. (A) Plot graphs of the TPM values from the RNA-Seq. (B) Plot graphs of the relative expression values from the qPCR assay. ** p < 0.01.