| Literature DB >> 35884992 |
Lasma Lidaka1,2, Laine Bekere3, Gunta Lazdane2, Marija Lazovska4, Iveta Dzivite-Krisane5, Linda Gailite4.
Abstract
BACKGROUND: Polycystic ovary syndrome (PCOS) is one of the most common endocrinopathies in women. It can manifest in adolescence, affecting up to 8% of adolescents. Long-term health consequences characteristic of PCOS are impaired fertility, increased risk of type 2 diabetes, metabolic disorders and cardiovascular disease. All of these sequelae are exacerbated by increased body weight, a major feature of PCOS. The protein encoded by the YAP1 gene plays a key role in one of the pivotal mechanisms that govern cellular/organismal metabolism and contributes to the pathogenesis of metabolic diseases. AIM: To compare the prevalence of single nucleotide variants (SNVs) in the YAP1 gene among adolescents with PCOS, adolescents at risk of PCOS development and healthy adolescents, and assess their association with the clinical characteristics of PCOS.Entities:
Keywords: PCOS; YAP1 gene; adolescent
Year: 2022 PMID: 35884992 PMCID: PMC9312887 DOI: 10.3390/biomedicines10071688
Source DB: PubMed Journal: Biomedicines ISSN: 2227-9059
Characterisation of selected SNVs in YAP1 gene.
| SNV | MAF in Europe a | HGVS Nomenclature (Reference Sequence: NM_001130145.2) | Published Association [ | Population |
|---|---|---|---|---|
| rs11225138 | 0.08 | c.572+8773G > C | Higher LH level in PCOS group | Han Chinese, adults |
| rs11225161 | 0.08 | c.803-6130C > T | Difference in PCOS and control group, additionally association with glucose level in OGTT | Han Chinese, adults |
| rs11225166 | 0.09 | c.1033-3886G > T | Association with glucose level in OGTT | Han Chinese, adults |
| rs3858420 | 0.33 | c.1276+42= | NR | NR |
| rs79981660 | 0.04 | c.985-20G > A | NR | NR |
a Minor allele frequency (MAF) data from GnomAD (accessed on 17 February 2022) about European population. SNV—single nucleotide variation, HGVS—Human genome variation society, NR—not reported.
Baseline clinical characteristics of the PCOS, risk and control groups.
| Variable | PCOS Group ( | Risk Group ( | Control Group ( | |
|---|---|---|---|---|
| Chronological age, median years (IQR) | 16 (2.0) | 15 (2.0) | 17 (1.0) | <0.001 |
| Gynaecological age, median years (IQR) † | 4.0 (3.0) | 3.5 (2.0) | 4.0 (2.0) | 0.258 |
| BMI, median percentile (IQR) | 83.7 (50.4) | 75.4 (42.1) | 45.0 (46.6) | <0.001 |
| Individuals with BMI above the 85th percentile, | 30 (53.6) | 6 (27.3) | 9 (14.1) | <0.001 |
| Waist–hip ratio, median (IQR) | 0.82 (0.12) | 0.80 (0.06) | 0.76 (0.06) | 0.001 |
| mFG score, median (IQR) | 9.0 (6.0) | 8.0 (4.5) | 2.0 (2.0) | <0.001 |
| GAGS score, mean (SD) | 14.4 (9.2) | 10.9 (8.8) | 6.9 (6.0) | <0.001 |
| No acne, | 1 (1.9) | 2 (10.0) | 6 (15.0) | |
| Mild acne, | 34 (65.4) | 13 (65.0) | 31 (77.5) | 0.149 |
| Moderate acne, | 15 (28.8) | 4 (20.0) | 3 (7.5) | 0.003 |
| Severe acne, | 2 (3.8) | 1 (5.0) | 0 (0) | 0.091 |
| Polycystic ovary morphology on ultrasound, | 21 (34.4) | 3 (13.6) | 5 (7.6) | 0.001 |
† Gynaecological age—age (in years) at the time of the study minus age at menarche; BMI—body mass index; mFG—modified Ferriman-Gallwey; GAGS—Global Acne Grading System; IQR—interquartile range for medians.
Genotype frequencies of the five SNVs in the PCOS, risk and control groups.
| SNV/ | PCOS Group ( | Risk Group ( | Control Group ( | MAF | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HH | Hh | hh | MAF a | HH | Hh | hh | MAF b | HH | Hh | hh | MAF | ||
| 57 | 2 | 0 | 0.017 | 20 | 1 | 0 | 0.024 | 60 | 3 | 0 | 0.024 | 1.00 | |
| 52 | 8 | 1 | 0.082 | 18 | 4 | 0 | 0.091 | 56 | 10 | 0 | 0.076 | 0.81 | |
| 49 | 10 | 1 | 0.100 | 15 | 5 | 0 | 0.125 | 49 | 13 | 0 | 0.105 | 0.71 | |
| 46 | 11 | 1 | 0.112 | 17 | 5 | 0 | 0.114 | 47 | 15 | 0 | 0.121 | 0.83 | |
| 27 | 29 | 2 | 0.284 | 11 | 7 | 4 | 0.341 | 35 | 22 | 6 | 0.270 | 0.14 | |
HH—homozygous carriers of major alleles; Hh—heterozygous allele carriers; hh—homozygous carriers of minor alleles. a Genotypes for SNVS rs79981660, rs11225138, rs11225161, rs11225166, rs3858420 were available for 97%, 100%, 98%, 95%, 93% individuals, respectively. b Genotypes for SNVS rs79981660, rs11225138, rs11225161, rs11225166, rs3858420 were available for 95%, 100%, 91%, 100%, 100% individuals, respectively. c Genotypes for SNVS rs79981660, rs11225138, rs11225161, rs11225166, rs3858420 were available for 95%, 100%, 94%, 94%, 95% individuals, respectively.
Phenotype associations with major or minor allele carrying in PCOS patients.
| SNV | Modified Ferriman-Gallwey Score, Median (IQR) | BMI, Median Percentile (IQR) | Waist–Hip Ratio, Median (IQR) | Total Testosterone Level, Median (IQR) | LH, Mean (SD) | FSH, Median (IQR) | Estradiol, Median (IQR) | PCO Morphology on Ultrasound, | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| MAC (HH) | MiAC (Hh, hh) |
| |
| 9.0 (6.0) | 13.5 | 0.15 | 83.7 (51.5) | 86.4 | 0.73 | 0.82 (0.12) | 0.84 | 0.70 | 0.40 | 0.62 | 0.48 | 8.1 (5.1) | 7.5 (5.6) | 0.87 | 5.5 (2.5) | 5.7 | 0.76 | 44.9 (24.9) | 36.2 | 0.54 | 19 (35.8) | 1 (50.0) | 1.00 | |
| 10.0 (6.0) | 8.5 (5.8) | 0.43 | 89.0 (56.6) | 71.6 (33.3) | 0.90 | 0.82 (0.11) | 0.83 (0.25) | 0.73 | 0.39 (0.40) | 0.56 (0.38) | 0.50 | 8.4 (5.2) | 6.1 (4.4) | 0.31 | 5.5 (2.5) | 6.3 (4.1) | 0.20 | 44.2 (23.2) | 34.4 (27.1) | 0.44 | 20 | 1 (12.5) | 0.12 | |
| 10.0 (6.0) | 9.0 (6.0) | 0.82 | 83.7 (58.0) | 85.5 (33.0) | 0.47 | 0.82 (0.11) | 0.86 (0.22) | 0.49 | 0.38 | 0.63 (0.36) | 0.16 | 8.2 (5.2) | 7.0 (4.9) | 0.55 | 5.4 (2.5) | 6.6 (2.8) | 0.09 | 44.9 (23.7) | 38.9 (20.9) | 0.48 | 19 | 2 (20.0) | 0.21 | |
| 10.0 (6.0) | 10.0 (5.5) | 0.81 | 83.7 (58.0) | 85.5 | 0.45 | 0.82 (0.11) | 0.86 (0.22) | 0.83 | 0.37 (0.40) | 0.64 (0.38) | 0.08 | 8.1 (5.1) | 7.9 (5.3) | 0.95 | 5.4 (2.4) | 6.3 (2.5) | 0.12 | 43.1 (23.2) | 41.2 (29.5) | 0.81 | 19 (43.2) | 2 (18.2) | 0.13 | |
| 8.5 (6.5) | 11.0 (5.8) | 0.17 | 78.4 (64.0) | 89.0 (47.0) | 0.66 | 0.83 (0.11) | 0.82 (0.13) | 0.42 | 0.41 (0.42) | 0.41 (0.38) | 0.89 | 7.4 (4.9) | 8.6 (5.3) | 0.46 | 5.5 (2.8) | 5.6 (2.2) | 0.25 | 45.0 (32.2) | 37.5 (21.0) | 0.14 | 11 (44.0) | 10 (33.3) | 0.42 | |
PCO—polycystic ovary; MAC—major allele carrier; MiAC—Minor allele carrier; HH—homozygous carriers of major alleles; Hh—heterozygous allele carriers; hh—homozygous carriers of minor alleles; IQR—interquartile range for medians.