Literature DB >> 35880174

Inflammation in Preeclampsia: Genetic Biomarkers, Mechanisms, and Therapeutic Strategies.

Yue Wang1, Baoxuan Li1, Yan Zhao1.   

Abstract

Objective: Preeclampsia is a common and serious complication of pregnancy, posing a threat to maternal and fetal safety due to the lack of effective biomarkers and treatment strategies. This study aimed to identify potential biomarkers that can be used to predict preeclampsia and identify the molecular mechanisms of preeclampsia pathogenesis and drug prediction at the transcriptome level.
Methods: We analyzed differential expression genes (DEGs) in preeclampsia and non-preeclampsia groups in the GSE75010 dataset, cross-linking with extracted inflammatory response-related genes to obtain differentially expressed inflammation-related genes (DINRGs). Enrichment analysis and protein-protein interaction (PPI) networks were constructed to understand the functions and enrichment pathways. Machine learning models were used to identify key genes associated with preeclampsia and build a nomogram in the training set, which was validated in the validation set. The R package RcisTarget was used to predict transcription factors, and Cytoscape was used to construct miRNA-mRNA pathways, which could identify the molecular mechanisms. Then, we conducted molecular docking of the obtained key genes INHBA (inhibin subunit beta A), OPRK1 (opioid receptor kappa 1), and TPBG (trophoblast glycoprotein), as well as predicted transcription factors with drug molecules. Additionally, the CIBERSORT method explored the differences in immune cell infiltration between preeclampsia and non-preeclampsia samples based on the GSE75010 dataset.
Results: A total of 69 DINRGs associated with preeclampsia patients were screened. INHBA, OPRK1, and TPBG were the key genes based on machine learning models. A nomogram for prediction was further constructed, and the receiver operating curves (ROCs) showed good performance. Based on the transcriptome level of key genes, we proposed that RELA-miR-548K/miR-1206-TPBG may be a potential RNA regulatory pathway regulating the progression of early preeclampsia. Molecular docking suggested the effectiveness of curcumin in the treatment of preeclampsia. Additionally, regulatory T cells (Tregs) and resting mast cells were significantly different between the two groups.
Conclusion: In summary, we identified three key inflammation-associated genes, namely INHBA, OPRK1, and TPBG, which can be used as potential genetic biomarkers for preeclampsia prediction and treatment, and established a nomogram as a predictive model. Additionally, we provided insights into the mechanisms of preeclampsia development at the transcriptome level and performed corresponding drug predictions.
Copyright © 2022 Wang, Li and Zhao.

Entities:  

Keywords:  curcumin; inflammation; machine learning; preeclampsia; regulatory pathways

Mesh:

Substances:

Year:  2022        PMID: 35880174      PMCID: PMC9307876          DOI: 10.3389/fimmu.2022.883404

Source DB:  PubMed          Journal:  Front Immunol        ISSN: 1664-3224            Impact factor:   8.786


  54 in total

1.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Authors:  Paul Shannon; Andrew Markiel; Owen Ozier; Nitin S Baliga; Jonathan T Wang; Daniel Ramage; Nada Amin; Benno Schwikowski; Trey Ideker
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

2.  Integrative single-cell and cell-free plasma RNA transcriptomics elucidates placental cellular dynamics.

Authors:  Jason C H Tsang; Joaquim S L Vong; Lu Ji; Liona C Y Poon; Peiyong Jiang; Kathy O Lui; Yun-Bi Ni; Ka Fai To; Yvonne K Y Cheng; Rossa W K Chiu; Yuk Ming Dennis Lo
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-22       Impact factor: 11.205

3.  Activin A and inhibin A as possible endocrine markers for pre-eclampsia.

Authors:  S Muttukrishna; P G Knight; N P Groome; C W Redman; W L Ledger
Journal:  Lancet       Date:  1997-05-03       Impact factor: 79.321

Review 4.  Pre-eclampsia.

Authors:  Ben W J Mol; Claire T Roberts; Shakila Thangaratinam; Laura A Magee; Christianne J M de Groot; G Justus Hofmeyr
Journal:  Lancet       Date:  2015-09-02       Impact factor: 79.321

Review 5.  Lasting Effects of Intrauterine Exposure to Preeclampsia on Offspring and the Underlying Mechanism.

Authors:  Hui Qing Lu; Rong Hu
Journal:  AJP Rep       Date:  2019-09-10

6.  Curcumin's Effect on COX-2 and IL-10 Serum in Preeclampsia's Patient Undergo Sectio Caesarea with Spinal Anesthesia.

Authors:  Wulan Fadinie; Aznan Lelo; Dadik Wahyu Wijaya; Sarma Nursani Lumbanraja
Journal:  Open Access Maced J Med Sci       Date:  2019-10-14

7.  Regulatory T Cells in Pregnancy Adverse Outcomes: A Systematic Review and Meta-Analysis.

Authors:  Samantha Green; Marina Politis; Kathrine S Rallis; Alba Saenz de Villaverde Cortabarria; Athina Efthymiou; Nicoleta Mureanu; Kathryn V Dalrymple; Cristiano Scottà; Giovanna Lombardi; Rachel M Tribe; Kypros H Nicolaides; Panicos Shangaris
Journal:  Front Immunol       Date:  2021-10-29       Impact factor: 7.561

8.  Targeting TBK1 Attenuates LPS-Induced NLRP3 Inflammasome Activation by Regulating of mTORC1 Pathways in Trophoblasts.

Authors:  Sohee Lee; Jiha Shin; Jong-Seok Kim; Jongdae Shin; Sung Ki Lee; Hwan-Woo Park
Journal:  Front Immunol       Date:  2021-11-09       Impact factor: 7.561

9.  Early prediction of preeclampsia in pregnancy with cell-free RNA.

Authors:  Mira N Moufarrej; Sevahn K Vorperian; Ronald J Wong; Ana A Campos; Cecele C Quaintance; Rene V Sit; Michelle Tan; Angela M Detweiler; Honey Mekonen; Norma F Neff; Courtney Baruch-Gravett; James A Litch; Maurice L Druzin; Virginia D Winn; Gary M Shaw; David K Stevenson; Stephen R Quake
Journal:  Nature       Date:  2022-02-09       Impact factor: 49.962

10.  Preeclampsia: From Inflammation to Immunoregulation.

Authors:  Denise C Cornelius
Journal:  Clin Med Insights Blood Disord       Date:  2018-01-10
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  1 in total

1.  Bioinformatics methods in biomarkers of preeclampsia and associated potential drug applications.

Authors:  Ying Peng; Hui Hong; Na Gao; An Wan; Yuyan Ma
Journal:  BMC Genomics       Date:  2022-10-19       Impact factor: 4.547

  1 in total

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