| Literature DB >> 35879029 |
Mattia Marchi1, Giacomo Galli1, Gianluca Fiore1, Andrew Mackinnon2, Giorgio Mattei1, Fabrizio Starace3, Gian M Galeazzi1,3,4.
Abstract
Objective: We aimed to predict antipsychotic prescription patterns for people with schizophrenia using machine learning (ML) algorithms.Entities:
Keywords: Antipsychotic drugs; Drug polytherapy; Drug prescription; Machine learning; Schizophrenia
Year: 2022 PMID: 35879029 PMCID: PMC9329108 DOI: 10.9758/cpn.2022.20.3.450
Source DB: PubMed Journal: Clin Psychopharmacol Neurosci ISSN: 1738-1088 Impact factor: 3.731
Fig. 1STROBE flow chart. STROBE, Strengthening the Reporting of Observational Studies in Epide-miology; SUs, Community Mental Health Service Users (SUs).
Descriptive analysis of the sample
| Variable | Value |
|---|---|
| Sex, male | 208 (56.5) |
| Married | 71 (20.6) |
| Employed | 115 (33.0) |
| Schooling (> 8 yr) | 120 (35.8) |
| Italian Citizenship | 334 (92.8) |
| Antipsychotic medication (LAI) | 185 (50.3) |
| Anticholinergic medication | 67 (18.2) |
| APP | 137 (37.2) |
| Therapy unchanged in the last year | 168 (45.8) |
| Compulsory psychiatric hospitaliza-tions in the last year | 8 (2.2) |
| Number of psychiatric hospitalizations in the last year | |
| 0 | 333 (90.5) |
| 1 | 20 (5.4) |
| 2 | 12 (3.3) |
| 3 | 3 (0.8) |
| Recorded BMI (in the last year) | 38 (10.3) |
| Recorded blood exams (in the last year) | 143 (38.9) |
| Recorded ECG (in the last year) | 124 (33.7) |
| Recorded side effects (in the last year) | 110 (29.9) |
| Age (yr) | 52.9 ± 12.8 (24−82) |
| Antipsychotic dose (mg chlorpromazine equivalence) | 238.1 ± 204.8 (17−1,050) |
| Length of psychiatric hospitalization in the last year (day) | 1.6 ± 6.2 (0−36) |
| Length of psychiatric hospitalization in the last 3 years (day) | 6.4 ± 27.9 (0−65) |
| Overall community mental health center services in the last year | 39.7 ± 59.6 (2−335) |
| Medical community mental health center services in the last year | 8.0 ± 6.5 (0−32) |
| Urgent community mental health center services in the last year | 0.7 ± 2.4 (0−9) |
Values are presented as number (%) or mean ± standard deviation (range).
LAI, long-acting injectable antipsychotic; APP, antipsychotic polytherapy; BMI, body mass index; ECG, electrocardiogram.
Model’s performance comparisons in the prediction of the total antipsychotic dose
| Comparison | ∆MAE ( | ∆RMSE ( | ∆ R2 ( |
|---|---|---|---|
| LM vs. RF | 0.032 (0.001) | 0.073 (0.009) | −0.034 (0.014) |
| SVM vs. RF | 0.060 (< 0.001) | 0.125 (0.001) | −0.079 (< 0.001) |
| NB vs. RF | 0.031 (0.001) | 0.073 (0.010) | −0.034 (0.014) |
| KNN vs. RF | 0.082 (< 0.001) | 0.086 (< 0.001) | −0.181 (< 0.001) |
MAE, mean absolute error; RMSE, root mean square error; LM, linear regression model; RF, random forest; SVM, supported vector machine; NB, Naïve Bayes; KNN, K-nearest neighborhood.
NB: A positive difference represents better performance by RF, on the contrary for the R2.
Fig. 2Plot of variable importance of predictors of antipsychotic dose. ECG, electrocardiogram; LAI, long- acting injectable antipsychotics; BMI, body mass index; APP, antipsychotic polytherapy.
Predictors of antipsychotic dose using multivariate linear regression model
| Variable | Coefficient | 95% CI | Standardized beta coefficient | |
|---|---|---|---|---|
| APP[ | 6.61 | 4.63 to 8.60 | < 0.01 | 0.417 |
| Sex[ | −2.36 | −4.38 to −0.33 | 0.02 | −0.235 |
| Length of admission (day) | 0.02 | −0.26 to 0.30 | 0.86 | 0.119 |
| Overall community mental health contacts | 0.01 | −0.01 to 0.03 | 0.15 | 0.030 |
| Compulsory admission | 2.72 | −4.08 to 9.52 | 0.43 | 0.026 |
| Number of admissions | 0.42 | −3.26 to 4.09 | 0.82 | 0.054 |
| Urgent community mental health contacts | 0.23 | −0.19 to 0.65 | 0.28 | 0.069 |
| Marital status | 0.58 | −1.96 to 3.13 | 0.65 | −0.011 |
| Medical community mental health contacts | 0.03 | −0.14 to 0.20 | 0.70 | 0.080 |
| Age | −0.05 | −0.14 to 0.03 | 0.19 | −0.059 |
| Italian citizenship[ | −6.83 | −11.63 to −2.03 | < 0.01 | −0.088 |
| Anticholinergic medication[ | 2.48 | 0.10 to 4.87 | 0.04 | 0.101 |
| Recorded BMI | 2.47 | −0.60 to 5.55 | 0.11 | 0.013 |
| Employment[ | −3.45 | −5.40 to −1.49 | < 0.01 | −0.077 |
| Therapy stable | 1.35 | −0.53 to 3.15 | 0.16 | 0.056 |
| Recorded blood exam | 0.48 | −2.10 to 3.07 | 0.71 | 0.032 |
| Recorded side effect | −1.06 | −3.25 to 1.13 | 0.34 | −0.001 |
| LAI | −0.32 | −2.18 to 1.54 | 0.73 | −0.002 |
| Schooling | 0.59 | −1.36 to 2.54 | 0.55 | 0.047 |
| Recorded ECG | −0.48 | −3.13 to 2.17 | 0.72 | 0.018 |
95% CI, 95% confidence interval; APP, antipsychotic polytherapy; BMI, body mass index; LAI, long-acting injectable antipsychotic; ECG, electrocardiogram.
Significant associations are highlighted using a.
pvalues: *< 0.05; **< 0.01.
Model’s performance comparison in the prediction of APP
| Comparison | ∆AUROC ( | ∆True positive rate ( | ∆True negative rate ( |
|---|---|---|---|
| LM vs. RF | −0.034 (0.044) | −0.078 (0.001) | 0.037 (0.106) |
| SVM vs. RF | −0.048 (0.003) | −0.311 (< 0.001) | 0.194 (< 0.001) |
| NB vs. RF | −0.035 (0.042) | −0.096 (< 0.001) | 0.047 (0.045) |
| KNN vs. RF | −0.022 (0.022) | −0.125 (< 0.001) | 0.114 (< 0.001) |
APP, antipsychotic polytherapy; AUROC, area under the receiving operator curve; LM, logistic regression model; RF, random forest; SVM, supported vector machine; NB, Naïve Bayes; KNN, K-nearest neighborhood.
NB: A positive difference represents better performance by RF.
Fig. 3Variable importance plot of the predictors of APP. APP, antipsychotic polytherapy; BMI, body mass index; ECG, electrocar-diogram; LAI, long-acting injectable antipsychotics.
Odds ratios predictors of APP derived from logistic regression model
| Variable | Odds ratio | 95% CI | |
|---|---|---|---|
| LAI | 1.16 | 0.59−2.27 | 0.67 |
| Total community mental health contacts[ | 1.02 | 1.01−1.03 | < 0.01 |
| Therapy stable | 0.73 | 0.38−1.41 | 0.35 |
| Recorded side effect | 0.95 | 0.43−2.13 | 0.91 |
| Medical community mental health contacts | 1.03 | 0.96−1.09 | 0.42 |
| Age[ | 1.06 | 1.03−1.09 | < 0.01 |
| Recorded blood exam | 1.81 | 0.70−4.68 | 0.22 |
| Recorded ECG | 0.91 | 0.35−2.39 | 0.85 |
| Recorded BMI | 0.68 | 0.21−2.23 | 0.53 |
| Employment | 0.76 | 0.37−1.57 | 0.47 |
| Sex | 0.59 | 0.28−1.24 | 0.16 |
| Anticholinergic medication[ | 1.68 | 1.09−2.61 | 0.019 |
| Urgent community mental health contacts | 1.05 | 0.91−1.21 | 0.55 |
| Schooling | 1.37 | 0.67−2.83 | 0.39 |
| Length of admission (day) | 1.06 | 0.96−1.17 | 0.28 |
| Marital status | 0.47 | 0.18−1.21 | 0.12 |
| Number of admissions | 0.31 | 0.07−1.28 | 0.11 |
| Italian citizenship | 3.94 | 0.69−22.5 | 0.12 |
| Compulsory admission | 2.92 | 0.001−32.3 | 0.38 |
APP, antipsychotic polytherapy; 95% CI, 95% confidence interval; LAI, long-acting injectable antipsychotic; ECG, electrocardiogram; BMI, body mass index.
Significant associations are highlighted using a.
pvalues: *< 0.05; **< 0.01.