Literature DB >> 35877762

Sampling errors and variability in video transects for assessment of reef fish assemblage structure and diversity.

Stijn Bruneel1,2, Long Ho1, Wout Van Echelpoel1, Amber Schoeters1, Heleen Raat1, Tom Moens2, Rafael Bermudez3,4, Stijn Luca5, Peter Goethals1.   

Abstract

Video monitoring is a rapidly evolving tool in aquatic ecological research because of its non-destructive ability to assess fish assemblages. Nevertheless, methodological considerations of video monitoring techniques are often overlooked, especially in more complex sampling designs, causing inefficient data collection, processing, and interpretation. In this study, we discuss how video transect sampling designs could be assessed and how the inter-observer variability, design errors and sampling variability should be quantified and accounted for. The study took place in the coastal areas of the Galapagos archipelago and consisted of a hierarchical repeated-observations sampling design with multiple observers. Although observer bias was negligible for the assessment of fish assemblage structure, diversity and counts of individual species, sampling variability caused by simple counting/detection errors, observer effects and instantaneous fish displacement was often important. Especially for the counts of individual species, sampling variability most often exceeded the variability of the transects and sites. An extensive part of the variability in the fish assemblage structure was explained by the different transects (13%), suggesting that a sufficiently high number of transects is required to account for the within-location variability. Longer transect lengths allowed a better representation of the fish assemblages as sampling variability decreased by 33% if transect length was increased from 10 to 50 meters. However, to increase precision, including more repeats was typically more efficient than using longer transect lengths. The results confirm the suitability of the technique to study reef fish assemblages, but also highlight the importance of a sound methodological assessment since different biological responses and sampling designs are associated with different levels of sampling variability, precision and ecological relevance. Therefore, besides the direct usefulness of the results, the procedures to establish them may be just as valuable for researchers aiming to optimize their own sampling technique and design.

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Year:  2022        PMID: 35877762      PMCID: PMC9312474          DOI: 10.1371/journal.pone.0271043

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.752


  13 in total

1.  Patterns, causes and consequences of regional variation in the ecology and life history of a reef fish.

Authors:  Benjamin I Ruttenberg; Alison J Haupt; Angel I Chiriboga; Robert R Warner
Journal:  Oecologia       Date:  2005-09-29       Impact factor: 3.225

2.  Evaluating and ranking the vulnerability of global marine ecosystems to anthropogenic threats.

Authors:  Benjamin S Halpern; Kimberly A Selkoe; Fiorenza Micheli; Carrie V Kappel
Journal:  Conserv Biol       Date:  2007-10       Impact factor: 6.560

3.  Coral reef diversity refutes the neutral theory of biodiversity.

Authors:  Maria Dornelas; Sean R Connolly; Terence P Hughes
Journal:  Nature       Date:  2006-03-02       Impact factor: 49.962

Review 4.  Implications of movement for species distribution models - Rethinking environmental data tools.

Authors:  Stijn Bruneel; Sacha Gobeyn; Pieterjan Verhelst; Jan Reubens; Tom Moens; Peter Goethals
Journal:  Sci Total Environ       Date:  2018-02-20       Impact factor: 7.963

5.  Remote high-definition rotating video enables fast spatial survey of marine underwater macrofauna and habitats.

Authors:  Dominique Pelletier; Kévin Leleu; Delphine Mallet; Gérard Mou-Tham; Gilles Hervé; Matthieu Boureau; Nicolas Guilpart
Journal:  PLoS One       Date:  2012-02-27       Impact factor: 3.240

6.  Quantifying relative diver effects in underwater visual censuses.

Authors:  Luke C Dickens; Christopher H R Goatley; Jennifer K Tanner; David R Bellwood
Journal:  PLoS One       Date:  2011-04-21       Impact factor: 3.240

7.  Measures of precision for dissimilarity-based multivariate analysis of ecological communities.

Authors:  Marti J Anderson; Julia Santana-Garcon
Journal:  Ecol Lett       Date:  2014-12-01       Impact factor: 9.492

8.  Reef fish communities are spooked by scuba surveys and may take hours to recover.

Authors:  Michael J Emslie; Alistair J Cheal; M Aaron MacNeil; Ian R Miller; Hugh P A Sweatman
Journal:  PeerJ       Date:  2018-05-24       Impact factor: 2.984

9.  Variability in abundance of temperate reef fishes estimated by visual census.

Authors:  Alejo J Irigoyen; David E Galván; Leonardo A Venerus; Ana M Parma
Journal:  PLoS One       Date:  2013-04-04       Impact factor: 3.240

10.  The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded.

Authors:  Shinichi Nakagawa; Paul C D Johnson; Holger Schielzeth
Journal:  J R Soc Interface       Date:  2017-09-13       Impact factor: 4.118

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