| Literature DB >> 35874683 |
Shuai Zhang1,2, Guiyan Yang1,3.
Abstract
Cytokines and cytokine receptors are important mediators in immunity and cancer development. Interleukin 22 (IL22) is one of the most important cytokines which has protumor effect. Given that common and specific roles of cytokines/receptors in multiple cancers, we conducted a pan-cancer study to investigate the role of IL22RA1 in cancer using The Cancer Genome Atlas (TCGA) database. Notably, we found IL22RA1 transcript was upregulated in 11 cancer types compared with their corresponding control. The mRNA expression level of IL22RA1 was highest in the pancreas among tumor tissues. The higher expression of IL22RA1 was associated with worse overall survival rate in patients. A total of 30 IL22RA1-correlated genes (e.g. IL17D, IL22RA2, IL20RB, IL10RA, IL10RB, TSLP and TYK2) are involved in the JAK/STAT pathway which promotes tumor progression. The upregulation of IL22RA1 in tumors was correlated with immune cell infiltration level. Higher expression of IL22RA2, IL20RB, IL10RA, IL10RB, TSLP, TYK2, STAT1 and STAT3 was associated with decreased overall survival rate in patients. IL22RA1 mutation was observed more in uterine cancer and melanoma compared with the other cancer types. Deactivation of IL22RA1 induced a lot of changes in gene expression. IL22RA1 mutants had upregulated DNA damage/repair genes in uterine cancer, whereas downregulated genes in the FoxO signaling pathway. In melanoma, mutation of IL22RA1 can upregulate the HIF signaling pathway but downregulate metabolic pathways. Our study suggests that IL22RA1/JAK/STAT signaling can be an important target for cancer treatment.Entities:
Keywords: IL22RA1; immune response; jak-stat; overall survival; pan-cancer analysis
Mesh:
Substances:
Year: 2022 PMID: 35874683 PMCID: PMC9304570 DOI: 10.3389/fimmu.2022.915246
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 8.786
Figure 1Expression of IL22RA1 is upregulated in tumors compared with normal tissues among 11 cancers and high expression worsens survival in patients. Data were obtained from TIMER2.0 (http://timer.cistrome.org) and TCGA/TARGET/GTEx databases. (A) Overexpression of IL22RA1 transcript in multiple tumors. *p < 0.05, **p < 0.01, ***p < 0.001. (B) The transcriptive level of IL22RA1 in different organs among diverse cancer types. (C) Kaplan Meier Plot shows the effect of higher IL22RA1 expression on overall survival in patients.
Figure 2IL22RA1-associated genes are involved in the JAK-STAT signaling pathway. A total of 30 genes were related with IL22RA1 based on https://www.ndexbio.org/iquery/. (A) Network showing protein-protein interaction for the 31 genes. (B) Correlation between genes related with IL22RA1 and IL22RA1 in multiple cancers. (C) Function analysis of these 31 genes based on Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways using DAVID. Significant pathways shown (FDR < 0.05) with gene number for each pathway.
Figure 3Higher expression of IL22RA1-associated genes correlates with overall survival in patients. (A) Heatmap shows the expression of IL22RA1 and IL22RA1-related genes in tumor and normal tissues from TCGA/TARGET/GTEx. (B–J) Influence of the expression of indicated genes on overall survival rate based on UCSC Xena web-based tool.
Correlation between IL22RA1 and immune cells in cancers with significance.
| Cancer | Infiltrates | Database | rho |
| adj. |
|---|---|---|---|---|---|
| BLCA (n=408) | T cell CD8+ | TIMER | 0.375870861 | 8.57E-14 | 5.71E-12 |
| BLCA (n=408) | T cell CD4+ Th2 | XCELL | 0.240040351 | 3.20E-06 | 0.00010619 |
| BLCA (n=408) | Myeloid dendritic cell | TIMER | 0.237558592 | 4.07E-06 | 7.53E-05 |
| BLCA (n=408) | Macrophage M0 | CIBERSORT | 0.202692024 | 9.01E-05 | 0.00097276 |
| BLCA (n=408) | T cell NK | XCELL | -0.22469057 | 1.35E-05 | 0.00027053 |
| BLCA (n=408) | Macrophage M2 | TIDE | -0.265003729 | 2.48E-07 | 8.77E-06 |
| CESC (n=306) | T cell CD4+ | EPIC | 0.252022829 | 2.19E-05 | 0.00049351 |
| CESC (n=306) | Myeloid dendritic cell activated | CIBERSORT-ABS | 0.22993318 | 0.00011274 | 0.00135965 |
| CHOL (n=36) | T cell CD8+ effector memory | XCELL | -0.440181078 | 0.00814013 | 0.03876253 |
| ESCA (n=185) | T cell CD4+ memory resting | CIBERSORT | 0.246807835 | 0.0008377 | 0.01034805 |
| ESCA (n=185) | T cell regulatory (Tregs) | CIBERSORT | 0.208691008 | 0.00493263 | 0.03198381 |
| ESCA (n=185) | Macrophage M2 | TIDE, CIBERSORT, QUANTISEQ | -0.202781909 | 0.00633201 | 0.02602196 |
| ESCA (n=185) | Myeloid dendritic cell resting | CIBERSORT-ABS | -0.212632641 | 0.0041604 | 0.02496328 |
| ESCA (n=185) | Macrophage/Monocyte | MCPCOUNTER | -0.214880679 | 0.0037704 | 0.0171822 |
| ESCA (n=185) | Myeloid dendritic cell resting | CIBERSORT | -0.22573523 | 0.00231228 | 0.01560499 |
| ESCA (n=185) | Cancer associated fibroblast | EPIC | -0.268325664 | 0.00027063 | 0.00188264 |
| ESCA (n=185) | Macrophage | TIMER | -0.287547841 | 9.08E-05 | 0.00097276 |
| ESCA (n=185) | Cancer associated fibroblast | MCPCOUNTER, XCELL, TIDE | -0.311235972 | 2.11E-05 | 0.0002414 |
| KIRC (n=533) | Macrophage/Monocyte | MCPCOUNTER | 0.394215155 | 1.37E-18 | 8.20E-16 |
| KIRC (n=533) | Macrophage M1 | QUANTISEQ | 0.371131488 | 1.68E-16 | 5.03E-14 |
| KIRC (n=533) | T cell CD4+ effector memory | XCELL | 0.304993488 | 2.22E-11 | 2.33E-09 |
| KIRC (n=533) | Macrophage M2 | XCELL | 0.261457064 | 1.21E-08 | 7.28E-07 |
| KIRC (n=533) | Macrophage | EPIC, XCELL | 0.238954435 | 2.08E-07 | 8.32E-06 |
| KIRC (n=533) | T cell CD8+ effector memory | XCELL | 0.202298739 | 1.20E-05 | 0.00027353 |
| KIRC (n=533) | Myeloid dendritic cell | TIMER | 0.200561735 | 1.43E-05 | 0.00020326 |
| KIRC (n=533) | Macrophage M2 | TIDE | -0.203868047 | 1.03E-05 | 0.00021213 |
| KIRP (n=290) | Macrophage/Monocyte | MCPCOUNTER | 0.430030266 | 4.90E-13 | 7.35E-11 |
| KIRP (n=290) | T cell CD4+ (non-regulatory) | QUANTISEQ | 0.306746724 | 5.04E-07 | 2.44E-05 |
| KIRP (n=290) | NK cell | QUANTISEQ | 0.305413211 | 5.68E-07 | 2.02E-05 |
| KIRP (n=290) | Plasmacytoid dendritic cell | XCELL | -0.239781291 | 0.00010039 | 0.00124858 |
| KIRP (n=290) | Macrophage M1 | CIBERSORT | -0.249759539 | 4.98E-05 | 0.00066353 |
| LIHC (n=371) | Macrophage M1 | CIBERSORT-ABS | 0.239900403 | 6.61E-06 | 0.00015655 |
| LIHC (n=371) | T cell CD4+ memory resting | CIBERSORT-ABS | 0.202900672 | 0.00014789 | 0.00245193 |
| LUAD (n=515) | T cell CD4+ | EPIC | 0.260107312 | 4.58E-09 | 2.88E-07 |
| LUAD (n=515) | Macrophage M2 | TIDE | -0.201121877 | 6.78E-06 | 0.00015655 |
| LUSC (n=501) | Macrophage1 | XCELL | -0.205633542 | 5.96E-06 | 0.000149 |
| STAD (n=415) | NK cell resting | CIBERSORT | 0.238313484 | 2.71E-06 | 7.22E-05 |
| STAD (n=415) | T cell CD4+ naive | XCELL | -0.205045951 | 5.78E-05 | 0.0012147 |
| STAD (n=415) | Myeloid dendritic cell activated | XCELL | -0.220478008 | 1.48E-05 | 0.00020326 |
| STAD (n=415) | T cell CD8+ central memory | XCELL | -0.221639465 | 1.33E-05 | 0.00028028 |
| STAD (n=415) | T cell CD8+ | XCELL | -0.238456104 | 2.67E-06 | 0.00010674 |
| STAD (n=415) | Myeloid dendritic cell | QUANTISEQ, MCPCOUNTER, XCELL | -0.245808023 | 1.27E-06 | 3.52E-05 |
| STAD (n=415) | Cancer associated fibroblast | XCELL | -0.262854121 | 2.08E-07 | 4.76E-06 |
| UCEC (n=545) | Myeloid dendritic cell activated | CIBERSORT | 0.34484618 | 0.00100105 | 0.00830034 |
Figure 4IL22RA1 mutation affects metabolic pathways in uterine cancer and melanoma. (A) Incidence of IL22RA1 mutation in different cancer types shows both UCEC and SKCM are major cancer types with higher mutation rate. (B) Volcano plot displaying the differentially expressed genes (|fold change|>1.5 and adjusted p < 0.05) after IL22RA1 mutation in uterine cancer (upper), and KEGG pathways for the upregulated and downregulated genes. (C) Volcano plot displaying differentially expressed genes (|fold change| >1.5 and adjusted p < 0.05) after IL22RA1 mutation in melanoma (upper), and KEGG pathways for the upregulated and downregulated genes.
Figure 5IL22RA1 expression in uterine cancer at protein and transcript level. (A) Representative Western blot results for IL22RA1 in uterine cancers from dogs (left panel). Results are presented as the ratio of the IL22RA1 band intensity to the intensity of the β-actin band (n = 3, right panel). (B, C) RNA seq data showing the transcript level of IL22RA1 in UCEC tissues and normal control tissues using GSE115810 and GSE182132 cohorts from GEO database. *p < 0.05, **p < 0.01.