Literature DB >> 35874203

Using NMR to Dissect the Chemical Space and O-Sulfation Effects within the O- and S-Glycoside Analogues of Heparan Sulfate.

Maria C Z Meneghetti1, Lucy Naughton2,3, Conor O'Shea4,3, Dindet S-E Koffi Teki5, Vincent Chagnault5, Helena B Nader1, Timothy R Rudd6,7, Edwin A Yates7, José Kovensky5, Gavin J Miller4,3, Marcelo A Lima2,3.   

Abstract

Heparan sulfate (HS), a sulfated linear carbohydrate that decorates the cell surface and extracellular matrix, is ubiquitously distributed throughout the animal kingdom and represents a key regulator of biological processes and a largely untapped reservoir of potential therapeutic targets. The temporal and spatial variations in the HS structure underpin the concept of "heparanome" and a complex network of HS binding proteins. However, despite its widespread biological roles, the determination of direct structure-to-function correlations is impaired by HS chemical heterogeneity. Attempts to correlate substitution patterns (mostly at the level of sulfation) with a given biological activity have been made. Nonetheless, these do not generally consider higher-level conformational effects at the carbohydrate level. Here, the use of NMR chemical shift analysis, NOEs, and spin-spin coupling constants sheds new light on how different sulfation patterns affect the polysaccharide backbone geometry. Furthermore, the substitution of native O-glycosidic linkages to hydrolytically more stable S-glycosidic forms leads to observable conformational changes in model saccharides, suggesting that alternative chemical spaces can be accessed and explored using such mimetics. Employing a series of systematically modified heparin oligosaccharides (as a proxy for HS) and chemically synthesized O- and S-glycoside analogues, the chemical space occupied by such compounds is explored and described.
© 2022 The Authors. Published by American Chemical Society.

Entities:  

Year:  2022        PMID: 35874203      PMCID: PMC9301708          DOI: 10.1021/acsomega.2c02070

Source DB:  PubMed          Journal:  ACS Omega        ISSN: 2470-1343


  25 in total

1.  Thiooligosaccharide conjugate vaccines evoke antibodies specific for native antigens.

Authors:  David R Bundle; Jamie R Rich; Sandra Jacques; Henry N Yu; Mark Nitz; Chang-Chun Ling
Journal:  Angew Chem Int Ed Engl       Date:  2005-12-02       Impact factor: 15.336

2.  The nature of the conserved basic amino acid sequences found among 437 heparin binding proteins determined by network analysis.

Authors:  Timothy R Rudd; Mark D Preston; Edwin A Yates
Journal:  Mol Biosyst       Date:  2017-05-02

3.  Conformational Populations of β-(1→4) O-Glycosidic Linkages Using Redundant NMR J-Couplings and Circular Statistics.

Authors:  Wenhui Zhang; Toby Turney; Reagan Meredith; Qingfeng Pan; Luke Sernau; Xiaocong Wang; Xiaosong Hu; Robert J Woods; Ian Carmichael; Anthony S Serianni
Journal:  J Phys Chem B       Date:  2017-03-30       Impact factor: 2.991

4.  Adaptable synthesis of C-glycosidic multivalent carbohydrates and succinamide-linked derivatization.

Authors:  Gavin J Miller; John M Gardiner
Journal:  Org Lett       Date:  2010-10-20       Impact factor: 6.005

5.  Synthesis of novel S- and O-disaccharide analogs of heparan sulfate for heparanase inhibition.

Authors:  D S-E Koffi Teki; B Coulibaly; A Bil; A Vallin; D Lesur; B Fanté; V Chagnault; J Kovensky
Journal:  Org Biomol Chem       Date:  2022-05-04       Impact factor: 3.876

Review 6.  Heparan sulfate and heparin interactions with proteins.

Authors:  Maria C Z Meneghetti; Ashley J Hughes; Timothy R Rudd; Helena B Nader; Andrew K Powell; Edwin A Yates; Marcelo A Lima
Journal:  J R Soc Interface       Date:  2015-09-06       Impact factor: 4.118

7.  Semi-rigid solution structures of heparin by constrained X-ray scattering modelling: new insight into heparin-protein complexes.

Authors:  Sanaullah Khan; Jayesh Gor; Barbara Mulloy; Stephen J Perkins
Journal:  J Mol Biol       Date:  2009-11-03       Impact factor: 5.469

8.  Synthesis of a heparin-related GlcN-IdoA sulfation-site variable disaccharide library and analysis by Raman and ROA spectroscopy.

Authors:  Gavin J Miller; Steen U Hansen; Marek Baráth; Christian Johannessen; Ewan W Blanch; Gordon C Jayson; John M Gardiner
Journal:  Carbohydr Res       Date:  2014-07-14       Impact factor: 2.104

9.  Uncovering the Relationship between Sulphation Patterns and Conformation of Iduronic Acid in Heparan Sulphate.

Authors:  Po-Hung Hsieh; David F Thieker; Marco Guerrini; Robert J Woods; Jian Liu
Journal:  Sci Rep       Date:  2016-07-14       Impact factor: 4.379

10.  Synthetic heparan sulfate dodecasaccharides reveal single sulfation site interconverts CXCL8 and CXCL12 chemokine biology.

Authors:  Gordon C Jayson; Steen U Hansen; Gavin J Miller; Claire L Cole; Graham Rushton; Egle Avizienyte; John M Gardiner
Journal:  Chem Commun (Camb)       Date:  2015-08-03       Impact factor: 6.222

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