| Literature DB >> 35866020 |
Zoe E Melvin1,2, Hussein Dhirani2, Christopher Mitchell3, Tim R B Davenport4, Jonathan D Blount3, Alexander V Georgiev1,2.
Abstract
Biomarkers of oxidative stress (OS) are useful in addressing a wide range of research questions, but thus far, they have had limited application to wild mammal populations due to a reliance on blood or tissue sampling. A shift toward non-invasive measurement of OS would allow field ecologists and conservationists to apply this method more readily. However, the impact of methodological confounds on urinary OS measurement under field conditions has never been explicitly investigated. We combined a cross-sectional analysis with a field experiment to assess the impact of four potential methodological confounds on OS measurements: (1) time of sampling, (2) environmental contamination from foliage; (3) delay between sample collection and flash-freezing in liquid nitrogen; and (4) sample storage of up to 15 months below -80°C. We measured DNA oxidative damage (8-hydroxy-2'-deoxyguanosine, 8-OHdG), lipid peroxidation (malondialdehyde, MDA), total antioxidant capacity (TAC), and uric acid (UA) in 167 urine samples collected from wild Zanzibar red colobus (Piliocolobus kirkii). We found that MDA was higher in samples collected in the morning than in the afternoon but there were no diurnal patterns in any of the other markers. Contamination of samples from foliage and length of time frozen at -80°C for up to 15 months did not affect OS marker concentrations. Freezing delay did not affect OS levels cross-sectionally, but OS values from individual samples showed only moderate-to-good consistency and substantial rank-order reversals when exposed to different freezing delays. We recommend that diurnal patterns of OS markers and the impact of storage time before and after freezing on OS marker concentrations be considered when designing sampling protocols. However, given the high stability we observed for four OS markers subject to a variety of putative methodological confounds, we suggest that urinary OS markers provide a valuable addition to the toolkit of field ecologists and conservationists within reasonable methodological constraints.Entities:
Keywords: 8‐oxodG; DNA damage; Zanzibar red colobus; ecophysiology; lipid peroxidation; non‐invasive sampling; oxidative stress
Year: 2022 PMID: 35866020 PMCID: PMC9288928 DOI: 10.1002/ece3.9115
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 3.167
AICc tables used for model selection and multi‐model inference for the candidate set of models for each OS marker and the subsequent estimates and standard errors for each model parameter
| (A) Log(8‐OHdG [ng/ml corr. SG]) | Method | Frozen storage | Time | Freezing D | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Model structure | K | AICc | ΔAICc | AICcWt | Estimate | SE | Estimate | SE | Estimate | SE | Estimate | SE |
| Method |
|
|
|
| −0.21 | 0.1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Method + Time |
|
|
|
| −0.2 | 0.1 | 0 | 0 | −0.02 | 0.01 | 0 | 0 |
| Method + Freezing D |
|
|
|
| −0.22 | 0.1 | 0 | 0 | 0 | 0 | 0.03 | 0.02 |
| Method + Time + Freezing D |
|
|
|
| −0.21 | 0.1 | 0 | 0 | −0.02 | 0.01 | 0.03 | 0.02 |
| Method + Frozen Storage |
|
|
|
| −0.21 | 0.1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Time |
|
|
|
| 0 | 0 | 0 | 0 | −0.02 | 0.01 | 0 | 0 |
| Null |
|
|
|
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Method + Frozen Storage + Time |
|
|
|
| −0.2 | 0.1 | 0 | 0 | −0.02 | 0.01 | 0 | 0 |
| Method + Frozen Storage + Freezing D |
|
|
|
| −0.22 | 0.1 | 0 | 0 | 0 | 0 | 0.03 | 0.02 |
| Method + Frozen Storage + Time + Freezing D |
|
|
|
| −0.21 | 0.1 | 0 | 0 | −0.02 | 0.01 | 0.03 | 0.02 |
| Freezing D |
|
|
|
| 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | 0.02 |
| Time + Freezing D |
|
|
|
| 0 | 0 | 0 | 0 | −0.02 | 0.01 | 0.02 | 0.02 |
| Frozen Storage + Time |
|
|
|
| 0 | 0 | 0 | 0 | −0.02 | 0.01 | 0 | 0 |
| Frozen Storage | 4 | 100.59 | 4.38 | 0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Frozen storage + Freezing D | 5 | 101.65 | 5.43 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0.03 | 0.02 |
| Frozen Storage + Time + Freezing D | 6 | 102.08 | 5.87 | 0.01 | 0 | 0 | 0 | 0 | −0.02 | 0.01 | 0.02 | 0.02 |
Note: Method = collection method (plastic or leaves), Freezing D = freezing delay (decimal hours), Time = time of sample collection (decimal hours past midnight), and Frozen Storage = length of time in frozen storage (decimal weeks). The null model included just the random effects. K = number of parameters, AICc = the second‐order Akaike's information criterion, ΔAICc = the difference between the AICc of each model and the top‐ranked model, and AICcWt is the AIC weight of each model. Estimates and SE are set to 0 for models that do not contain the variable of interest so as not to inflate estimate values. The models in bold represent the 95% confidence set of models.
The model‐averaged estimates and confidence intervals with shrinkage for each model parameter
| Model‐averaged estimate with shrinkage | Unconditional SE | 95% unconditional confidence interval | |
|---|---|---|---|
|
log(8‐OHdG [ng/ml corr. SG])
| |||
| Method of collection | −0.16 | 0.12 | −0.4, 0.08 |
| Length of time frozen | 0 | 0 | 0,0 |
| Time of day | −0.01 | 0.01 | −0.03, 0.02 |
| Freezing delay | 0.01 | 0.02 | −0.03, 0.05 |
|
log(MDA [μM corr. SG])
| |||
| Method of collection | −0.03 | 0.06 | −0.16, 0.09 |
| Length of time frozen | 0 | 0 | 0, 0.01 |
| Time of day | −0.02 | 0.01 | −0.04, 0.01 |
| Freezing delay | 0 | 0.01 | −0.02, 0.02 |
|
TAC (mM corr. SG)
| |||
| Length of time frozen | 0.09 | 0.07 | −0.04, 0.23 |
| Time of day | −0.23 | 0.28 | −0.78, 0.33 |
| Freezing delay | 0.11 | 0.33 | −0.54, 0.77 |
|
log(UA [μM corr. SG])
| |||
| Length of time frozen | 0 | 0 | 0, 0.01 |
| Time of day | −0.01 | 0.02 | −0.04, 0.02 |
| Freezing delay | 0.01 | 0.02 | −0.03, 0.04 |
FIGURE 1Difference in MDA concentration between pairs of samples collected from the same individual on the same day in the morning (before midday) and in the afternoon (after midday). The black open circles and lines represent the mean MDA concentration and standard deviation for morning and afternoon samples
FIGURE 2Effect of freezing delay on OS marker measurement (8‐OHdG and MDA, both corrected for specific gravity): (a) percentage change relative to values of time 0 controls; and (b) absolute value change. Controls were frozen as soon as possible after collection and then aliquots were frozen following 2‐, 4‐, and 6‐h delays. Sample numbers 1, 2, and 5 are missing in for 8‐OHdG due to failed measurements in some aliquots
Results of intraclass correlation coefficient (ICC) calculation using a single‐rating, absolute agreement, two‐way mixed‐effects model
| 95% confidence interval |
| |||||
|---|---|---|---|---|---|---|
|
| ICC | Lower bound | Upper bound | Value | Significance | |
| 8‐OHdG | 4 | 0.81 | 0.41 | 0.98 | 16 | < 0.001 |
| MDA | 7 | 0.80 | 0.52 | 0.96 | 15.8 | < 0.001 |