Literature DB >> 35859260

Molecular identification and phylogenetic analysis of spider mites (Prostigmata: Tetranychidae) of Turkey.

Emre İnak1, Sultan Çobanoğlu2, Philippe Auger3, Alain Migeon3.   

Abstract

The family Tetranychidae includes many agriculturally important species known as spider mites. Their morphological identification is quite difficult due to the tiny size of their taxonomic characters and the requirement for high-level expertise. This may lead to pest misidentification and thus failure in pest management. DNA-based species identification seems to offer an alternative solution to overcome these issues. In the present study, two common molecular markers-Cytochrome oxidase subunit I (COI) and Internal transcribed spacer 2 (ITS2)-were used to identify 10 spider mite species from Turkey. Furthermore, genetic distances for several of them were assessed. Panonychus ulmi and Bryobia kissophila had the lowest (1.1%) and highest (4.5%) intra-specific genetic distances, respectively. In addition, integrative taxonomy allowed to identify Eotetranychus quercicola in Turkey as a new record. The sequences herein obtained will allow rapid species identification using molecular techniques and will contribute to resolve the phylogenetic history of spider mites.
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Eotetranychus; Genetic distance; Integrative taxonomy; Spider mites; Tetranychidae

Mesh:

Substances:

Year:  2022        PMID: 35859260     DOI: 10.1007/s10493-022-00728-5

Source DB:  PubMed          Journal:  Exp Appl Acarol        ISSN: 0168-8162            Impact factor:   2.380


  21 in total

Review 1.  Phylogenomics and the reconstruction of the tree of life.

Authors:  Frédéric Delsuc; Henner Brinkmann; Hervé Philippe
Journal:  Nat Rev Genet       Date:  2005-05       Impact factor: 53.242

2.  ITS2 sequences as barcodes for identifying and analyzing spider mites (Acari: Tetranychidae).

Authors:  Tselila Ben-David; Sarah Melamed; Uri Gerson; Shai Morin
Journal:  Exp Appl Acarol       Date:  2007-03-09       Impact factor: 2.132

Review 3.  How to fail at species delimitation.

Authors:  Bryan C Carstens; Tara A Pelletier; Noah M Reid; Jordan D Satler
Journal:  Mol Ecol       Date:  2013-07-16       Impact factor: 6.185

4.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

5.  Molecular characterization of phytoseiid mites in Turkey based on the internal transcribed spacer (ITS) region, with a new record for the country.

Authors:  Emre İnak; Sultan Çobanoğlu; Elif Sade; Marie-Stéphane Tixier
Journal:  Exp Appl Acarol       Date:  2020-05-22       Impact factor: 2.132

Review 6.  A critical review on some closely related species of Tetranychus sensu stricto (Acari: Tetranychidae) in the public DNA sequences databases.

Authors:  Renata S de Mendonça; Denise Navia; Ivone R Diniz; Philippe Auger; Maria Navajas
Journal:  Exp Appl Acarol       Date:  2011-04-06       Impact factor: 2.132

7.  Resistance incidence and presence of resistance mutations in populations of Tetranychus urticae from vegetable crops in Turkey.

Authors:  Emre İnak; Yasin Nazım Alpkent; Sultan Çobanoğlu; Wannes Dermauw; Thomas Van Leeuwen
Journal:  Exp Appl Acarol       Date:  2019-06-27       Impact factor: 2.132

8.  Morphological identification of Amphitetranychus species (Acari: Tetranychidae) with crossbreeding, esterase zymograms and DNA barcode data.

Authors:  Tea Arabuli; Mohamed Waleed Negm; Tomoko Matsuda; Yasuki Kitashima; Tea Abramishvili; Igor Andrijovych Akimov; Olga Valentynivna Zhovnerchuk; Sergei Yakovlevich Popov; Tetsuo Gotoh
Journal:  PLoS One       Date:  2019-09-13       Impact factor: 3.240

9.  The ITS2 Database III--sequences and structures for phylogeny.

Authors:  Christian Koetschan; Frank Förster; Alexander Keller; Tina Schleicher; Benjamin Ruderisch; Roland Schwarz; Tobias Müller; Matthias Wolf; Jörg Schultz
Journal:  Nucleic Acids Res       Date:  2009-11-17       Impact factor: 16.971

10.  MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization.

Authors:  Kazutaka Katoh; John Rozewicki; Kazunori D Yamada
Journal:  Brief Bioinform       Date:  2019-07-19       Impact factor: 11.622

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