Literature DB >> 35855702

Detection of dengue virus serotypes by single-tube multiplex RT-PCR and multiplex real-time PCR assay.

Kundan Tandel1, Mahadevan Kumar2, G S Bhalla3, S P S Shergill4, Vijaya Swarnim5, Kavita Sahai6, R M Gupta7.   

Abstract

Background: All four dengue serotypes cause infection, with one of them predominantly reported from a particular geographical region. Coinfection by more than one serotype is reported from hyperendemic regions. These coinfections are clinically more severe than infection with a single serotype. This study was carried out to detect the predominant dengue serotype and presence of coinfections.
Methods: Acute-phase serum samples of patients suffering from dengue infection were collected. They were screened for the presence of IgM, IgG and NS1Ag by a rapid test. Conventional multiplex reverse transcriptase polymerase chain reaction (RT-PCR) and multiplex real-time RT-PCR assays were carried out for detection and serotyping of the dengue virus.
Results: A total of 196 samples were positive by the rapid card test. Of these, 139 were NS1Ag positive, 40 were positive only for IgM, 5 were positive only for IgG and 12 samples were positive for different combinations of antigen and antibodies. All four serotypes were detected in these samples by PCR. DENV-3 was found to be most common circulating serotype. A total of 22 cases were found to have coinfection with more than one dengue serotypes. Samples having only antibodies and no antigen on rapid card test were also positive for virus by PCR.
Conclusion: Prevalence of dengue co-infections is increasing. Moreover, it is important to screen for dengue virus in those samples also which do not show NS1Ag on rapid tests and have either one or both the antibodies. Real-time multiplex RT-PCR is found to be more sensitive in detecting coinfection than conventional multiplex RT-PCR.
© 2021 Director General, Armed Forces Medical Services. Published by Elsevier, a division of RELX India Pvt. Ltd.

Entities:  

Keywords:  Dengue; Real time polymerase chain reaction; Reverse transcriptase polymerase chain reaction

Year:  2021        PMID: 35855702      PMCID: PMC9287660          DOI: 10.1016/j.mjafi.2021.09.001

Source DB:  PubMed          Journal:  Med J Armed Forces India        ISSN: 0377-1237


  19 in total

Review 1.  Dengue: an escalating problem.

Authors:  Robert V Gibbons; David W Vaughn
Journal:  BMJ       Date:  2002-06-29

2.  Rapid detection, serotyping and quantitation of dengue viruses by TaqMan real-time one-step RT-PCR.

Authors:  Yong Yean Kong; Chong Heng Thay; Tan Chong Tin; Shamala Devi
Journal:  J Virol Methods       Date:  2006-09-26       Impact factor: 2.014

3.  Serotype-specific detection of dengue viruses in a fourplex real-time reverse transcriptase PCR assay.

Authors:  Barbara W Johnson; Brandy J Russell; Robert S Lanciotti
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

4.  Episode of coexisting infections with multiple dengue virus serotypes in central Karnataka, India.

Authors:  C S Vinodkumar; N K Kalapannavar; K G Basavarajappa; D Sanjay; Chandrasekar Gowli; Naveen G Nadig; B S Prasad
Journal:  J Infect Public Health       Date:  2013-04-03       Impact factor: 3.718

5.  Typing of dengue viruses in clinical specimens and mosquitoes by single-tube multiplex reverse transcriptase PCR.

Authors:  E Harris; T G Roberts; L Smith; J Selle; L D Kramer; S Valle; E Sandoval; A Balmaseda
Journal:  J Clin Microbiol       Date:  1998-09       Impact factor: 5.948

6.  Evaluation of RT-PCR as a tool for diagnosis of secondary dengue virus infection.

Authors:  Areerat Sa-ngasang; Sasitorn Wibulwattanakij; Sumalee Chanama; Anantchai O-rapinpatipat; Atchareeya A-nuegoonpipat; Surapee Anantapreecha; Pathom Sawanpanyalert; Ichiro Kurane
Journal:  Jpn J Infect Dis       Date:  2003 Oct-Dec       Impact factor: 1.362

7.  Occurrence of concurrent infections with multiple serotypes of dengue viruses during 2013-2015 in northern Kerala, India.

Authors:  Manchala Nageswar Reddy; Ranjeet Dungdung; Lathika Valliyott; Rajendra Pilankatta
Journal:  PeerJ       Date:  2017-03-14       Impact factor: 2.984

8.  Co-circulation and co-infections of all dengue virus serotypes in Hyderabad, India 2014.

Authors:  K Vaddadi; C Gandikota; P K Jain; V S V Prasad; M Venkataramana
Journal:  Epidemiol Infect       Date:  2017-07-20       Impact factor: 4.434

9.  Performance of Simplexa dengue molecular assay compared to conventional and SYBR green RT-PCR for detection of dengue infection in Indonesia.

Authors:  R Tedjo Sasmono; Aryati Aryati; Puspa Wardhani; Benediktus Yohan; Hidayat Trimarsanto; Sukmal Fahri; Tri Y Setianingsih; Febrina Meutiawati
Journal:  PLoS One       Date:  2014-08-07       Impact factor: 3.240

Review 10.  Meta-Analysis of Dengue Severity during Infection by Different Dengue Virus Serotypes in Primary and Secondary Infections.

Authors:  Kuan-Meng Soo; Bahariah Khalid; Siew-Mooi Ching; Hui-Yee Chee
Journal:  PLoS One       Date:  2016-05-23       Impact factor: 3.240

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