Phatthanaphong Therdtatha1,2, Akari Shinoda3, Jiro Nakayama4. 1. Department of Innovative Science and Technology for Bio-industry, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan. 2. Present address: Faculty of Agro-Industry, School of Agro-Industry, Chiang Mai University, Chiang Mai 50100, Thailand. 3. Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan. 4. Division of Systems Bioengineering, Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
Several hundred microbial species form a distinctive complex ecological community, namely
the gut microbiota, in the digestive tract of a person. It influences the host’s physiology
and susceptibility to disease via direct contact with host cells [1] or via its collective metabolic activities [2]. Multiple intrinsic and extrinsic factors, such as diet, host genetics
and physiology, drugs and disease, and living environments, are involved in shaping the gut
microbiota and its metabolic performance [3]. Notably,
diet is considered one of the key drivers of the gut microbial community, as it supplies
nutrition and alters the environment for the microbes [4,5,6,7].Asian diets vary remarkably within the continent and significantly differ from those on
other continents, with their main characteristics being that they are high in carbohydrates,
fiber, vitamins, and antioxidants but low in concentrated fat [8]. Traditional Asian diets are basically considered to contain foods with
beneficial effects against metabolic diseases, and some are reported to be helpful in
promoting and inhibiting the colonization of beneficial and non-beneficial gut bacteria,
respectively [7, 9,10,11,12]. However, contemporary diets have
recently influenced the dietary lifestyles of Asian people, as rapid development of global
food service chains has distorted local eating lifestyles. For instance, a trend toward an
increase in consumption of calorie-dense diets by Asian people, such as diets containing
refined carbohydrates, fat, red meats, and low fiber contents, has been largely confirmed by
several studies [13,14,15]. This occasionally distresses the
gut microbiota of Asian people, eventually leading to dysfunction of their gut microbial
communities [16,17,18].The development of next-generation sequencing (NGS) technology and progress of computer-
and database-assisted bioinformatics has revolutionized the genomic research fields in the
past two decades [19]. This includes studies on the
microbiome of the human digestive system, and we have gained insight into its variation
among the peoples of the world, including Asian people. The enterotype has been proposed as
a general concept to type the human gut microbiome throughout the world and was first
introduced by Arumugam et al. [20],
although it remains controversial in the aspect of inconsistency and lack of discreteness of
the enterotyping [21]. Three enterotypes were
originally characterized with high abundances of Bacteroides,
Prevotella, and Ruminococcus, respectively, which are
present regardless of ethnicity, gender, age, and body mass index (BMI) [20]. Following this first report, a number of studies
addressed the links of various microbiome markers and enterotypes with host phenotypes
[22].At present, we understand that the gut microbiota plays an indispensable role as an
interface between foods and host health. Asia is the world largest populous continent,
accounting for proximately 60% of the world population and containing a great diversity of
ethnicities with large variations in culture and lifestyle, especially in diet [23]. It can be said that each ethnic group has its own
dietary culture. In this context, Asia is an attractive field to study the interplay of the
gut microbial community and diet together with their effects on host health. Notably, Asian
people have specific physiological aspects involved in the vulnerability to metabolic
diseases. This therefore warrants capturing of the current status of the Asian gut in
association with host metabolic disorders.In this review, we introduce the current status of metabolic diseases, such as obesity and
type 2 diabetes (T2D), and the risk factors for them that are increasing and becoming recent
social problems in Asia. We also discuss the associations between diet and gut microbiota
that cause metabolic diseases in Asian people by drawing upon the latest studies, including
our own data.
CURRENT STATUS OF OBESITY AND DIABETES IN ASIAN PEOPLE
Prevalence of obesity and diabetes in Asia
Economic development and the ubiquity of low priced, highly processed diets in the past
half century in Asian countries has been critically associated with an epidemic of obesity
and diabetes among Asian people. Indeed, people in Asia have tended to shift away from
traditional plant-based diets to calorie-dense foods rich in fat, animal protein, and
simple sugars that lead to excessive weight gain and unhealthiness [13,14,15]. A study released by the Asian Development Bank Institute (ADBI)
indicated that the obese population (BMI >25) in Asia has reached about one billion,
corresponding to two out of every five adults [24].
The obese populations differ among the regions of Asia, with the population being
extremely high in the Pacific region, exceeding 50%, and the rate in Central Asia
following closely behind this. On the other hand, the rate was originally low in Southeast
Asia (19% of total population on 1990), but it increased from 1990 to 2013 to 38.6%, whose
increasing rate was highest in Asia. In particular, Malaysia is the fattest country in
Asia at present (46% of total population has a BMI >25), with the nation particularly
consuming high amounts of sugar in the form of various sugary drinks, an average of about
3 kg per person per year as reported by the World Health Organization (WHO) (https://www.who.int/malaysia/news/commentaries/detail/sugary-drinks-tax-important-first-step-but-obesity-in-malaysia-demands-further-action).
It should also be noted that Asia has recently become the epicenter of a diabetes epidemic
[25]. The International Diabetes Federation
stated that at least 463 million people among the total world population in 2019 were
suffering from diabetes and that more than half of the affected people lived in Asia
[26]. Moreover, five Asian countries are ranked
among the world’s top ten countries for the number of adults (20–79 years) with diabetes,
and six Asian countries are among the top ten for impaired glucose tolerance (IGT; Table 1). The abovementioned points indicate that metabolic diseases are a serious
concern in Asian people.
Table 1.
Top ten countries worldwide for the number of adults (20–79 years old) with
diabetes and impaired glucose tolerance (IGT) in 2019
Rank
Diabetes
Impaired glucose tolerance (IGT)
Country
Number of people (millions)
Country
Number of people (millions)
1.
China
116.4
China
54.5
2.
India
77.0
USA
37.4
3.
USA
31.0
Indonesia
29.1
4.
Pakistan
19.4
India
25.2
5.
Brazil
16.8
Brazil
15.1
6.
Mexico
12.8
Mexico
12.6
7.
Indonesia
10.7
Japan
12.1
8.
Germany
9.5
Pakistan
8.8
9.
Egypt
8.9
Thailand
8.3
10.
Bangladesh
8.4
Nigeria
8.2
*Data from the International Diabetes Federation (2019) [26].
*Data from the International Diabetes Federation (2019) [26].
Specific phenotypes of Asian people leading to the risk of obesity and T2D
Abdominal obesity is one of the common phenotypes among Asian people. Normally, Asian
people have lower BMIs compared with other ancestry groups but have higher body fat
distributions, which causes susceptibility to metabolic abnormalities related to obesity,
such as metabolic syndrome (MetS), cardiovascular diseases (CVDs), and T2D [27]. A study by Deurenberg et al.
indicated that the body fat percentage of Asian people is around 3–5% higher than that of
Caucasian people with the same BMI [28], and this
condition is termed the Y-Y paradox [29].
Comparison between populations of the same sex, age, and BMI suggested that Filipino
people with a higher body fat percentage show higher risks for T2D and MetS than
Caucasians [30]. People from China and India are
highly predisposed to abdominal obesity. Jia et al. reported that
one-third of Chinese adults are overweight or obese and that 10–20% of all adults are
affected by MetS [31]. Moreover, Chinese people
tend to have an apple-shaped body rather than pear-shaped body, which represent abdominal
obesity and generalized obesity, respectively [32].
Similar to China, obesity in India generally results from abdominal obesity. Ahirwar and
Mondal presented a study released by the Indian Council of Medical Research-India Diabetes
(ICMR-INDIAB) in 2015 stating that the prevalence rate of abdominal obesity in India is
higher than that of general obesity, with the rates varying among the regions from 16.9%
to 36.3% and 11.8% to 31.3%, respectively [33].
Moreover, abdominal obesity is one of the critical risk factors for the development of
CVDs in Indian people [33].Obesity can be linked with an increased risk of T2D, namely diabesity [34]. Accumulation of body fat is associated with
inflammation and is one of the major contributing factors to T2D [35]. In obese individuals, excessive calorie intake results in fat
accumulation in adipose tissues and lipotoxicity in non-adipose tissues, which activate
the production of nonesterified fatty acids (NEFAs), glycerol, and pro-inflammatory
cytokines, whereas antidiabetic hormones, such as leptin and adiponectin, are also
secreted from adipose tissues. The former action causes impaired insulin function as well
as low-grade inflammation, resulting in a loss of insulin sensitivity, which is referred
to as insulin resistance, and long-term insulin resistance leads to a constantly elevated
systemic glucose concentration and ultimately drives the development of T2D. It should be
noted that not all obese individuals develop T2D, and this is possibly explained by
specific anti-T2D metabolic phenotypes, such as the increased adipose tissue capacity for
lipogenesis in metabolically normal obese people [36, 37]. On the other hand, in Asia,
diabesity has been increasing gradually, although lean diabetes is still highly prevalent
[26, 38,39,40].Asian people are known to have specific physiological aspects involved in vulnerability
to glucose homeostasis. For example, Asian people have a high risk of insulin resistance
caused by dysfunctional pancreatic insulin secretion [41,42,43]. A number of studies have shown that slight defects in insulin secretion
capacity are indicated in healthy Asian people when assessed by their glucose tolerance
[41, 42].
Reduced pancreatic β-cell mass is normally found in Asian people, particularly East
Asians. A study by Yoon et al. suggested that the impaired insulin
secretion of T2D patients results from an inadequate pancreatic β-cell mass and/or
functional defects within the β-cells themselves [43]. Moreover, Kodama et al. speculated that even a small
decrease in insulin secretory function in East Asians leads to a rapid decrease in the
threshold level of insulin resistance and the development of T2D and that this instability
and the vulnerability of glucose homeostasis due to their lower β-cell function has
increased the prevalence of diabetes in East Asia in recent decades [44].
GUT MICROBIOTA OF ASIAN PEOPLE ASSOCIATED WITH LIFESTYLE DISEASE
Gut microbiota of Asian children with a change in their dietary lifestyle
We investigated the gut microbiomes of school-aged children in five Asian countries,
including Japan, China, Taiwan, Indonesia, and Thailand [45]. Urban and rural cities were chosen in each country that highly reflected
the microbiome profiles of the respective countries and residents, at least in part, which
we thought they might reflect the differences in dietary habits [45]. Among the subjects, two enterotype-like clusters were observed,
which were defined by a high abundance of Prevotella (P type) or high
abundance of Bacteroides and Bifidobacterium (BB type;
Fig. 1A and 1B). Whole shotgun metagenomics data for each microbiome type indicated that the P
type microbiome is enriched with genes encoding plant-polysaccharide degrading enzymes,
such as amylase and pectinase, while the BB type microbiome is enriched with genes
involved in bile acid metabolism, such as bile salt dehydrogenase (BSH) and bile
acid-coenzyme A ligase (BaiB), suggesting that the P type microbiome reflects a
plant-based diet and that the BB type microbiome reflects a high-fat diet (Fig. 1C). Children from East Asian countries
primarily harbored the BB type, whereas those from Southeast Asian countries primarily
harbored the P type, except for children from Bangkok, Thailand (Fig. 1D). The gut microbiota of Thai children likely reflects a
shift of dietary habits from a traditional to modern style that commenced in urban
areas.
Fig. 1.
Two enterotype clusters of school-age children in five Asian countries. (A)
Principal component analysis (PCA) of 303 samples based on the family-level
compositions of fecal microbiota. (B) Cluster analysis of the PCA plot in A. PS,
prediction strength; SW, silhouette index. (C) Abundance of enzymatic genes encoded
in the fecal metagenome of BB-type and P-type feces. (D) Distribution of P-type and
BB-type samples in ten cities from five countries. Figure 1A and B are reproduced from Nakayama et
al. [45] under a Creative Commons
License CC BY 4.0.
Two enterotype clusters of school-age children in five Asian countries. (A)
Principal component analysis (PCA) of 303 samples based on the family-level
compositions of fecal microbiota. (B) Cluster analysis of the PCA plot in A. PS,
prediction strength; SW, silhouette index. (C) Abundance of enzymatic genes encoded
in the fecal metagenome of BB-type and P-type feces. (D) Distribution of P-type and
BB-type samples in ten cities from five countries. Figure 1A and B are reproduced from Nakayama et
al. [45] under a Creative Commons
License CC BY 4.0.To address the impact of changes in dietary style, we performed two cross-sectional
studies to compare the gut microbiota of urban and rural children: one was conducted on
Leyte island in the Philippines (Fig. 2A) [16], and the other one was conducted on
the capital and rural cities in Thailand (Fig.
3A) [17]. Interestingly, Rohrer’s index was
significantly higher in urban children in both countries; notably, the index in urban
cities was around 145, which was the border between normal and obesity, whereas in rural
cities, it was in the middle of the normal range, suggesting that urban children in these
developing countries tend to suffer from obesity (Fig.
2B and 3B). This has attracted interest with respect to the condition of the gut
microbiota of urban children compared with rural children who maintain a standard body
mass under a traditional diet.
Fig. 2.
Comparative cross-sectional study on the food-gut microbiota-host physiology of
Leyte school-age children. Samples were collected from a rural city, Baybay (n=24),
and urban city, Ormoc (n=16), on Leyte island. (A) Map showing the locations of
Ormoc and Baybay cities on Leyte island. (B) Distribution of the Rohrer’s indices of
the subjects from Baybay and Ormoc. (C) Macronutrient consumption ratio of the
subjects from Baybay and Ormoc. (D) Redundancy analysis for the Baybay (B) and Ormoc
(O) subjects based on the bacterial compositions of their feces at the family level
and their macronutrient consumption ratios. (E) A: Distribution of the fat energy
intake ratio of the underweight (UW)-normal weight (NW) group and the overweight
(OW)-obese (OB) group. B: Distribution of the Firmicutes to Bacteroidetes ratio
(log10) of the UW-NW and OW-OB groups. Figures are reproduced from Nakayama
et al. [16] under a
Creative Commons License CC BY 4.0.
Fig. 3.
Comparative cross-sectional study on the food-gut microbiota-host physiology of
Thai school-age children. Samples were collected from a rural city, Buriram (n=28),
and urban city, Bangkok (n=17), in Thailand. (A) Map showing the locations of
Buriram and Bangkok in Thailand. (B) Distribution of the Rohrer’s indices of the
subjects from Bangkok (BK) and Buriram (BR). (C) Distribution of the daily consumed
amounts of food components in individuals in BK and BR. (D) Stacked bar chart of the
daily consumed amounts of each food component. The data are the averages for 15 BK
children and 26 BR children. (E) Box plot showing the levels of fecal propionate and
butyrate of the BK and BR children. Figures are reproduced from Kisuse et
al. [17] under a Creative Commons
License CC BY 4.0.
Comparative cross-sectional study on the food-gut microbiota-host physiology of
Leyte school-age children. Samples were collected from a rural city, Baybay (n=24),
and urban city, Ormoc (n=16), on Leyte island. (A) Map showing the locations of
Ormoc and Baybay cities on Leyte island. (B) Distribution of the Rohrer’s indices of
the subjects from Baybay and Ormoc. (C) Macronutrient consumption ratio of the
subjects from Baybay and Ormoc. (D) Redundancy analysis for the Baybay (B) and Ormoc
(O) subjects based on the bacterial compositions of their feces at the family level
and their macronutrient consumption ratios. (E) A: Distribution of the fat energy
intake ratio of the underweight (UW)-normal weight (NW) group and the overweight
(OW)-obese (OB) group. B: Distribution of the Firmicutes to Bacteroidetes ratio
(log10) of the UW-NW and OW-OB groups. Figures are reproduced from Nakayama
et al. [16] under a
Creative Commons License CC BY 4.0.Comparative cross-sectional study on the food-gut microbiota-host physiology of
Thai school-age children. Samples were collected from a rural city, Buriram (n=28),
and urban city, Bangkok (n=17), in Thailand. (A) Map showing the locations of
Buriram and Bangkok in Thailand. (B) Distribution of the Rohrer’s indices of the
subjects from Bangkok (BK) and Buriram (BR). (C) Distribution of the daily consumed
amounts of food components in individuals in BK and BR. (D) Stacked bar chart of the
daily consumed amounts of each food component. The data are the averages for 15 BK
children and 26 BR children. (E) Box plot showing the levels of fecal propionate and
butyrate of the BK and BR children. Figures are reproduced from Kisuse et
al. [17] under a Creative Commons
License CC BY 4.0.To begin, we compared the daily diets and fecal microbiota of children living in an urban
city (Ormoc) and rural city (Baybay) on Leyte island [16]. The results of a dietary survey and examination of fecal microbiota
revealed that the children in Ormoc consumed modern high-fat foods, such as snacks and
fast foods, with the associated total fat consumption accounting for 27.2% of their total
energy intake, which corresponded closely to the similar level of children in Western
countries. On the other hand, the children in Baybay maintained a traditional dietary
style, including the daily consumption of regional fruits, green mangos and bananas, and
their total fat consumption rate was 18.1% (Fig.
2C). Regarding microbiota, the children in these two cites harbored two
distinctive gut microbiotas, namely BB type and P type microbiotas, respectively. A
redundancy analysis indicated that the BB type microbiota in Ormoc is driven by high fat
consumption, reflecting the introduction of Western foods (Fig. 2D). It is highly surprising that the two populations of these
cities, which where of the same ethnicity and only 60 km apart from each other on the same
island, had opposing enterotypes that appeared to be driven by the introduction of a
Western diet. Interestingly, the fat consumption of the children in both cities on Leyte
island showed a positive correlation with the Firmicutes-to-Bacteroidetes (F/B) ratio,
which is known as a gut biomarker of obesity (Fig.
2E).In our Thai study, different aspects were observed [17]. Comparison of the daily diet profiles of Thai children who lived in a rural
city, Buriram, and an urban city, Bangkok, clearly indicated that the urban dietary
lifestyle has penetrated into Bangkok. Dietary records showed that Bangkok children
consumed more fat and simple sugars and much lower amounts of vegetables, whereas Buriram
children maintained a traditional Thai plant-based diet (Fig. 3C and 3D). Comparative microbiomics did not show an
enterotype shift like the Leyte children but did show slight changes in the abundance of
Peptostreptococcus, which increased in the Buriram children. On the
other hand, comparative metabolomics showed some distinct types among the children; one
type showed a higher level of short-chain fatty acids (SCFAs) in a cluster mainly
consisting of Buriram children, and the other type showed a higher level of amino acids
and lower level of SCFAs in a cluster mainly consisting of Bangkok children. Taken
together, the fecal butyrate and propionate concentrations were significantly lower in
Bangkok children than Buriram children (Fig.
3E). This suggests that urban dietary habits with lower consumption of vegetables
results in a reduction in colonic SCFA fermentation in Thai children.These two cross-sectional studies may indicate a gut microbiota crisis in Asian children.
Loss of SCFA fermentation in Bangkok children due to the shift away from traditional Thai
foods suggests the advantage of Thai traditional foods and disadvantage of urban foods.
Thailand is known as the “kitchen of the world”, and traditional Thai foods may be
representative of foods in Southeast Asia. The loss of benefits from this tradition and
the impact of this on the gut microbiota of children may not be a problem only in Thailand
but may also affect the whole area of Southeast Asia. The enterotype shift in children on
Leyte island represents a strong impact of the introduction of Western foods to Asian
people. The penetration of Western diets may drive the enterotype shift continuously
throughout Southeast Asia. We should keep an eye on the impact of the enterotype shift on
the health of Asian people.
Impact of the penetration of modern diets on gut microbiota in Asian people in
developing areas
There is a clear difference in terms of dietary patterns between Western and Asian
countries. Asian diets generally integrate several tastes, including sweet, sour, salty,
spicy, and bitter tastes, and their main characteristics are known to be high fiber,
vitamin, mineral, and antioxidant contents together with a high carbohydrate content but
low concentrated and total fat contents [8]. Western
diets, notably urban diets, tend to be short on fiber and to contain high-fat dairy
products and excessive amounts of refined and processed foods, alcohol, salt, red meats,
sugary drinks, snacks, eggs, and butter, meaning that they are enriched in terms of total
fat, animal proteins, and refined sugars [8].
Noticeably, the Western diet is penetrating into traditional diets in developing areas as
a part of urban lifestyles introduced in conjunction with ongoing economic growth.Asian diets are basically considered to contain relatively beneficial foods, to protect
against chronic metabolic disease, and to be helpful in promoting and inhibiting
beneficial and non-beneficial gut bacteria, respectively. For example, studies have
reported that a Japanese diet containing high levels of fiber promotes high numbers of
Bifidobacterium but low numbers of gut pathogenic
Clostridium spp. [10, 11]. Moreover, endosperm protein extracted from a
Japanese rice cultivar, Koshihikari, alters the gut microbiota diversity
and is associated with the suppression of high-fat diet (HFD)-induced obesity progression
by suppressing the growth of endotoxin-related chronic inflammatory Escherichia
coli in mice [9]. Another major component
of the Asian diet is vegetables. The Thai diet is known to be rich in vegetables (FAO,
United Nations, http://www.fao.org/3/ac145e/ac145e02.htm). As mentioned above, the
study of diets in relation to the gut microbiome and metabolome in the Thai cohort
indicated that children who consume a traditional vegetable-based diet have a greater
bacterial diversity with significantly higher levels of fecal SCFAs, mainly butyrate and
propionate, compared with children who consume a modern high-fat diet (Fig. 3E) [17]. Another study investigating healthy Thai vegetarians indicated that their
microbial communities are mainly driven by Prevotella but that they have
a low abundance of potential pathogen varieties [12].A Western diet with an urban lifestyle is generally considered to be harmful to health.
One of the major characteristics of Western diets is that they are rich in total fat,
so-called HFDs, and the consumption of a HFD has been linked to low-grade inflammation
related to metabolic disease [46,47,48]. An
animal study by Bortolin et al. found that a diet formulated based on a
Western style generates excessive fat accumulation in mice and results in metabolic
dysfunctions, as evaluated by significantly higher levels of several metabolic biomarkers
associated with obesity-related diseases, mainly hepatic steatosis, inflammation, and
insulin resistance, compared with a dietary control group [49]. Moreover, it alters the microbial community, resulting in gut dysbiosis
[49]. In humans, a randomized crossover clinical
trial was performed by Shin et al. to investigate the differences between
a Korean diet (more plant-derived and fewer animal components) and two American diets
(more animal and fewer plant-derived components) [7]. The results of four-week dietary interventions in overweight adults indicated
that the Korean diet promotes gut microbial diversity and decreases the level of
branched-chain amino acids, increased circulating levels of which are known to induce
insulin resistance and aggravate glucose intolerance [50], which was the opposite of the American diets [7]. A cross-sectional study indicated that gut microbiota of European
children, who ordinarily consume high-calorie diets, harbor increased abundances of
Proteobacteria and decreased abundances of Prevotella [6].As mentioned in the previous subsection regarding the changes in the gut microbiotas of
Asian children with a change in their dietary lifestyle, regional comparative studies of
Asian children suggested that their gut microbiotas are recently being affected by the
modernization of their diets. This leads to the question of how adults are affected. To
discuss this point, we present here a dataset we obtained through the Asian Microbiome
Project (http://www.agr.kyushu-u.ac.jp/lab/microbt/AMP/). A principal component
analysis (PCA) was performed by using gut microbial compositions at the genus level of
adults from six Asian countries, including Japan, China, South Korea, Mongolia, Indonesia,
and Thailand (Fig. 4A). As shown in Fig. 4B, three
enterotype-like clusters, namely a Ruminococcus type (R type) in addition
to the P and BB types, were observed, although the border between the clusters was rather
unclear. Differences in the distribution of enterotypes were present among the Asian
countries; for example, Japanese samples were mostly typed as the BB type, and Mongolian
and Indonesian samples were highly classified as the P type (Fig. 4C). Although it is known that the P type favorably colonizes
the intestines of people who favor plant-based diets, Mongolian people have dietary habits
that mainly consist of the consumption of meats and dairy products, with less consumption
of vegetables [51]. However, it is known that
Mongolian people consume high amounts of whole-wheat products [52], which contain high contents of arabinoxylan, which is known to
promote the colonization of Prevotella in the intestine [53]. Korean, Chinese (Beijing), and especially Thai
samples were highly localized in the R-type cluster, namely the
Ruminococcus-rich microbiome cluster (Fig. 4C), probably as a result of the fiber-rich diets in these
countries [54].
Fig. 4.
Enterotype clustering of the gut microbiomes of adults from six Asian countries.
(A) Principal component analysis (PCA) of fecal samples of adults from six countries
using their genus-level composition data. (B) Enterotype clustering based on the PCA
plots in A. (C) Percentages of samples classified into each enterotype in each
country. Figures are reproduced from Shinoda et al. [57] with permission from the publisher.
Enterotype clustering of the gut microbiomes of adults from six Asian countries.
(A) Principal component analysis (PCA) of fecal samples of adults from six countries
using their genus-level composition data. (B) Enterotype clustering based on the PCA
plots in A. (C) Percentages of samples classified into each enterotype in each
country. Figures are reproduced from Shinoda et al. [57] with permission from the publisher.To address the relationships between consumed foods and gut microbiota more directly, we
performed cross-sectional studies in two countries, Mongolia [55] and the Philippines [56,
57]. In each country, we collected food
consumption data as well as gut microbiome data in urban and rural sites. In Mongolia, we
collected samples in the capital city, Ulaanbaatar, and a rural city, Bulgan. The food
consumption data showed contrasting dietary habits: people in Bulgan mainly consumed a
traditional Mongolian diet, whereas people in Ulaanbaatar consumed far fewer traditional
foods (Fig. 5A). In the Philippines study, we collected samples in the capital city, Manila, and a
rural area, Albay. The food consumption data indicated that people in Manila consumed a
high ratio of fat, while people in Albay consumed a high ratio of carbohydrates (Fig. 5A). The microbiome data for these two
countries similarly showed the tradeoff of Prevotella and
Bacteroides between urban and rural areas in association with the
penetration of urban diets (Fig. 5B). Figure 5B also shows Japanese data indicating that
Prevotella is no longer present in most people. Japan has undergone
drastic development that began in the second half of the twentieth century, and people in
cities now live completely urban lifestyles. Taken together, the results of these studies
suggest that dietary urbanization has been a strong driving force for the shift in
enterotype from the P to BB type in Asian people.
Fig. 5.
Dietary habits (A) and Prevotella/Bacteroides
abundance (B) in urban and rural cites in Mongolia and the Philippines. Figures are
reproduced from Shinoda et al. [57] with permission from the publisher.
Dietary habits (A) and Prevotella/Bacteroides
abundance (B) in urban and rural cites in Mongolia and the Philippines. Figures are
reproduced from Shinoda et al. [57] with permission from the publisher.
Impact of tradeoff between Prevotella and Bacteroides on the health of Asians
Wu et al. investigated the links of long-term dietary patterns with
enterotypes [5]. They found that
Bacteroides was associated with protein and animal fat diets, whereas
Prevotella was associated with plant-based carbohydrate diets. Similar
results were revealed in the Asian cohort studies presented in the previous subsection
regarding the impact of the penetration of modern diets on gut microbiota in Asian people
in developing areas, suggesting that tradeoff between Prevotella-type and
Bacteroides-type microbiomes is ongoing due to the penetration of
modern Western-type diets [16, 45]. Recently, the Bacteroides
enterotype was reported to be associated with a high prevalence of T2D. A study conducted
by Wang et al. indicated a high prevalence of T2D in Chinese subjects
with Bacteroides-type microbiomes and elevated levels of blood
lipopolysaccharide (LPS), diamine oxidase (DAO), and tumor necrosis factor-alpha [58]. Their study suggests that these T2D patients
suffer from endotoxemia and low-grade inflammation, causing impaired insulin sensitivity
[58]. On the other hand, beneficial effects of
Prevotella colonization have been reported in some studies. The
response to a barley kernel diet with improved glucose tolerance is dependent on a high
ratio of Prevotella to Bacteroides in the human
intestine [59]. Mice administered
Prevotella copri by gavage showed improved glucose tolerance and an
increase in hepatic glycogen storage via the modulation of intestinal gluconeogenesis and
systemic energy homeostasis, with succinate serving as a source of intestinal glucose
[60]. Furthermore, a subsequent study indicated
that subjects with a high Prevotella level displayed an overall lower
insulin response, lower IL-6 concentrations, and hunger sensations compared with a low
Prevotella group, suggesting the benefit of a higher
Prevotella/Bacteroides ratio in host metabolic
regulation [61]. However, it should be noted that
the opposite results have also been reported, with mice administered P.
copri by gavage having significantly higher serum glucose levels after a
three-week challenge compared with controls administered a sham gavage and the fecal
P. copri abundance being positively correlated with homeostasis model
assessment-insulin resistance (HOMA-IR) at two weeks post bacterial challenge [62].We summarized the action of the enterotype shift from the Prevotella
type to the Bacteroides type in Fig.
6A. It seems that Bacteroides appears to be a new player related to
the promotion of T2D. A study by Sun et al. found that
over-representation of Bacteroides fragilis in Chinese patients is
associated with T2D via bile acid biotransformation [63]. Bile acids (BAs) are the end products of cholesterol catabolism and are
synthesized only in the liver [64]. Produced BAs
are pooled in the gallbladder, and after a meal, they are secreted into the ileum. Most
BAs are reabsorbed and recycled via the enterohepatic circulation, and the remaining BAs
enter the colon, are therein metabolized by a certain group of gut bacteria, and are
eventually voided in feces [64]. BAs regulate
metabolism and pathophysiology in the liver as signaling molecules that activate several
nuclear receptors. Among the receptors, farnesoid X receptor (FXR) plays an important role
in the metabolic regulation related to obesity and diabetes [64]. Inhibition of intestinal FXR is suggested to have beneficial
effects on glucose homeostasis [65,66,67]. Sun
et al. elucidated that B. fragilis is involved in T2D
through its bile salt hydrolase (BSH) function, which causes the loss of conjugated BAs,
notably glycoursodeoxycholic acid (GUDCA) and tauroursodeoxycholic acid (TUDCA),
functioning as an intestinal FXR antagonist and improving glucose homeostasis [63]. Moreover, the administration of an antidiabetic
drug, metformin, in T2D patients has been suggested to suppress B.
fragilis, causing a decrease in BSH activity with a consequent increase in
GUDCA and TUDCA levels. Eventually, the recovered levels of these conjugated BAs improve
the blood glucose level. A similar phenomenon was found in Indonesian T2D patients. A
study by Therdtatha et al. found that a T2D group of subjects harboring a
high abundance of B. fragilis showed low levels of conjugated BAs,
especially TUDCA, the level of which was restored by the administration of metformin
[18].
Fig. 6.
Mechanism of Bacteroides-related predisposition to type 2 diabetes
mellitus. (A) Predisposition to insulin sensitivity caused by an enterotype shift
from the Prevotella type to Bacteroides type. (B)
Tentative overview of T2D alleviation via B. fragilis inhibition
with metformin.
Mechanism of Bacteroides-related predisposition to type 2 diabetes
mellitus. (A) Predisposition to insulin sensitivity caused by an enterotype shift
from the Prevotella type to Bacteroides type. (B)
Tentative overview of T2D alleviation via B. fragilis inhibition
with metformin.It can be inferred that the key mechanism of the abovementioned T2D promotion is BSH
activity, the inhibition of which leads to the accumulation of conjugated BAs, which have
an FXR antagonistic effect. BSH, which is widely present in gut bacteria, hydrolyzes and
deconjugates glycine or taurine from the sterol core of the primary BAs, and this activity
has been known to have effects on various aspects of health [68]. A number of studies have suggested that BSH activity is commonly
found in strains of gram-positive probiotic candidates, such as
Lactobacillus spp. and Bifidobacterium spp., and other
gram-positive genera, such as Clostridium and
Enterococcus [69, 70]. In contrast, the activity of Gram-negative
bacteria has been largely unexplored, and the characterization of BSH related to the
members of Bacteroidetes has started [71]. Further
underlying modes of action in the microbiota-BSH axis involved in T2D and some other
metabolic diseases require more investigation.Finally, we show a model of T2D promotion by B. fragilis in Fig. 6B. B. fragilis synthesizes
folate, which mediates a broader set of biotransformations known as one-carbon (C1)
metabolism that serve as biosynthetic processes for amino acids, including glycine,
serine, and methionine, required for bacterial growth and survival. Metformin is known to
suppress folate and methionine production in gut bacteria (Fig. 6B (a)) [72].
Collectively, this indicates that metformin inhibits the growth of B.
fragilis via the modification of folate and methionine metabolism, resulting in
a decrease in BSH activity and subsequently increasing in the levels of TUDCA and GUDCA,
which are intestinal FXR antagonists (Fig. 6B
(b)) [63]. Inhibition of intestinal FXR is
suggested to have beneficial effects on glucose homeostasis via the induction of
glucagon-like peptide-1 (GLP-1) production (Fig.
6(c)) [65] Induction of GLP-1 production
is controlled by Takeda-G-protein-receptor-5 (TGR5) [73, 74], whereas FXR activation has found
suppressing the transcription and secretion of GLP-1 [66]. Subsequently, GLP-1 induces insulin secretion in β-cells (Fig. 6(d)) and downregulates hepatic
gluconeogenesis (Fig. 6(e)) [66]. It is also known that intestinal FXR inhibition
attenuates hepatic gluconeogenesis due to suppression of the expression of genes involved
in ceramide synthesis in the intestine (Fig.
6(f)) [67]. Ceramides are lipid molecules
that are known to disturb glucose homeostasis via inhibition of the insulin signaling
leading to insulin resistance (Fig. 6(g)) [75]. Moreover, they induce pancreatic β-cell apoptosis
that impairs insulin production (Fig. 6(h))
[76]. Ceramides also impair adipose function
through increased endoplasmic reticulum stress, resulting in a decrease in the ratio of
beige to white adipocytes leading to obesity, and possibly also inflammation and insulin
resistance (Fig. 6(i)) [77]. It should also be noted that metformin controls the blood glucose
level via the inhibition of gluconeogenesis by inhibiting mitochondrial glycerophosphate
dehydrogenase (Fig. 6(j)) [78].
CONCLUDING REMARKS
The rates of metabolic diseases have been increasing in Asia over the past few decades in
conjunction with rapid socioeconomic growth and in association with lifestyle-related
diseases of Asian people and their specific phenotypes. A shift in dietary habits from Asian
traditional to modern styles distorts the gut microbiota and metabolome, resulting in a
worsening of health. Particularly in Asian developing countries, where diets have gradually
modernized in urban areas, the enterotypes show a clear trend of change from the P type to
BB type. Diabetes is a metabolic disease that has recently become a serious problem among
Asian people. In terms of gut microbiota-related diabetes, the Bacteroides
enterotype can be a marker for a high risk of T2D in people in developing countries in Asia.
In particular, Indonesian study has indicated that B. fragilis together
with BSH activity shows a strong association with T2D. Collectively, this review warns of
the common risk of modernization of dietary habits with regard to the health of Asian
people.
CONFLICTS OF INTEREST
The authors declare that there are no conflicts of interest relevant to this article.
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