Literature DB >> 35845818

Estimating densities with non-linear support by using Fisher-Gaussian kernels.

Minerva Mukhopadhyay1, Didong Li2, David B Dunson2.   

Abstract

Current tools for multivariate density estimation struggle when the density is concentrated near a non-linear subspace or manifold. Most approaches require the choice of a kernel, with the multivariate Gaussian kernel by far the most commonly used. Although heavy-tailed and skewed extensions have been proposed, such kernels cannot capture curvature in the support of the data. This leads to poor performance unless the sample size is very large relative to the dimension of the data. The paper proposes a novel generalization of the Gaussian distribution, which includes an additional curvature parameter. We refer to the proposed class as Fisher-Gaussian kernels, since they arise by sampling from a von Mises-Fisher density on the sphere and adding Gaussian noise. The Fisher-Gaussian density has an analytic form and is amenable to straightforward implementation within Bayesian mixture models by using Markov chain Monte Carlo sampling. We provide theory on large support and illustrate gains relative to competitors in simulated and real data applications.

Entities:  

Keywords:  Bayesian mixture models; Kernel density estimation; Manifold learning; Markov chain Monte Carlo methods; Mixture model; Spherical data; von Mises–Fisher density

Year:  2020        PMID: 35845818      PMCID: PMC9286319          DOI: 10.1111/rssb.12390

Source DB:  PubMed          Journal:  J R Stat Soc Series B Stat Methodol        ISSN: 1369-7412            Impact factor:   4.933


  4 in total

1.  A probabilistic classification system for predicting the cellular localization sites of proteins.

Authors:  P Horton; K Nakai
Journal:  Proc Int Conf Intell Syst Mol Biol       Date:  1996

2.  Maximum likelihood estimation of the mixture of log-concave densities.

Authors:  Hao Hu; Yichao Wu; Weixin Yao
Journal:  Comput Stat Data Anal       Date:  2016-09       Impact factor: 1.681

3.  Robust Bayesian inference via coarsening.

Authors:  Jeffrey W Miller; David B Dunson
Journal:  J Am Stat Assoc       Date:  2018-08-06       Impact factor: 5.033

4.  Identifying Mixtures of Mixtures Using Bayesian Estimation.

Authors:  Gertraud Malsiner-Walli; Sylvia Frühwirth-Schnatter; Bettina Grün
Journal:  J Comput Graph Stat       Date:  2017-04-24       Impact factor: 2.302

  4 in total

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