| Literature DB >> 35844454 |
Cai-Zhen Zhao1, Ping Fu2, Wen-Ying Peng1, Na Pan1, Yuqiu Peng3, Min Zhao4, Weiquan Xie4.
Abstract
Background: Telocytes (TCs), a novel interstitial cell type in the reproductive tract, participating in pathophysiology of intrauterine adhesions (IUA). This study further investigates the hypothesis that TCs, a source of Wnt, promote the regeneration and repair of IUA.Entities:
Mesh:
Year: 2022 PMID: 35844454 PMCID: PMC9279088 DOI: 10.1155/2022/3809792
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.809
Sequences of primers.
| Primer | Sequence 5′-3′ |
|---|---|
| Wnt5a F | CATCGGAGCACAGCCTCTCTG |
| Wnt5a R | CACTCTTTGATGCCCGTCTT |
| GAPDH F | GTTCAACGGCACAGTCAAGG |
| GAPDH R | GACGCCAGTAGACTCCACGAC |
Figure 1(a) Identification of DEGs in intrauterine adhesions. Volcano plot showing the DEGs within the Wnt signaling pathway identified from GSE160633 that demonstrated the expression of 17 upregulated and 11 downregulated genes in the Wnt signaling pathway after differential expression analysis by R package “edgeR.” (b) Wnt signaling pathway of intrauterine adhesions. Green colour: significant downregulation genes; red colour: upregulated genes; grey colour: no significant expression genes.
Figure 2Identification of DEGs in TCs. (a) Volcano plot showing the DEGs within the Wnt signaling pathway identified from GSE160633 that demonstrated the expression of 87 upregulated genes in the Wnt signaling pathway after differential expression analysis by R package “edgeR.” (b, c) Wnt signaling pathway of intrauterine adhesions ((b) green colour: significant downregulation genes; red colour: upregulated genes; grey colour: no significant expression genes; (c) blue colour indicated that the genes were inhibited, and red colour refers to the genes activated). (d) Heatmap of cluster analysis for TCs and the control.
Figure 3Functional enrichment analysis. (a) GO pathway analysis results. (b) The bubble diagram of KEGG pathway analysis results. The red and blue dots represent the Q value, and the radius size of the dots indicates the gene count.
Different gene expression analysis for the Wnt family.
| Symbol | ENTREZ_GENE_ID | logFC | AveExpr |
|
| adj. |
|
|---|---|---|---|---|---|---|---|
| Wnt5a | 22418 | 4.0313732 | 3.651363551 | 3.613312579 | 0.001507913 | 0.002286092 | -1.428479596 |
| Wnt2b | 22414 | 3.524520998 | 3.654675451 | 3.144389174 | 0.004639853 | 0.006459668 | -2.141594988 |
| Wnt4 | 22417 | 3.072371727 | 3.010624964 | 4.522684069 | 0.000161814 | 0.000747941 | 0.865432088 |
| Wnt5b | 22419 | 1.823377015 | 2.602984654 | 3.967195031 | 0.000635261 | 0.001180258 | -0.287331913 |
| Wnt9a | 216795 | 1.8103149 | 2.527571689 | 4.388693956 | 0.000225109 | 0.000747941 | 0.657848975 |
| Wnt2 | 22413 | 1.604150693 | 2.514979778 | 3.502318256 | 0.001972899 | 0.002872857 | -1.358661798 |
| Wnt3 | 22415 | 1.494662041 | 2.245609734 | 5.059637174 | 4.33E-05 | 0.000747941 | 2.071793132 |
| Wnt9b | 22412 | 1.113813231 | 2.203253422 | 4.376123371 | 0.000232191 | 0.000747941 | 0.392900571 |
| Wnt6 | 22420 | 1.080457449 | 2.153111243 | 4.59520093 | 0.000135352 | 0.000747941 | 0.867351558 |
| Wnt16 | 93735 | 1.022555139 | 2.061293041 | 4.284275269 | 0.000291167 | 0.000747941 | 0.102511522 |
| Wnt1 | 22408 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt10a | 22409 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt10b | 22410 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt3a | 22416 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt7a | 22421 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt7b | 22422 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt8a | 20890 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt8b | 22423 | 0.996660358 | 2.052464329 | 4.194947349 | 0.000362834 | 0.000747941 | -0.113122703 |
| Wnt11 | 22411 | -1.031225518 | 3.159713186 | -1.06020852 | 0.300346508 | 0.33180157 | -5.143611641 |
Figure 4Expression of Wnt5a mRNA in TC-educated ESC group and noneducated ESC group. (Three times biological replicates were done. N = 10, one-tailed t-test is used for statistical analysis of data.)