Literature DB >> 35835942

Sinking Trichodesmium fixes nitrogen in the dark ocean.

Mar Benavides1,2, Sophie Bonnet3, Frédéric A C Le Moigne3,4, Gabrielle Armin5, Keisuke Inomura5, Søren Hallstrøm6, Lasse Riemann6, Ilana Berman-Frank7, Emilie Poletti3, Marc Garel3, Olivier Grosso3, Karine Leblanc3, Catherine Guigue3, Marc Tedetti3, Cécile Dupouy3.   

Abstract

The photosynthetic cyanobacterium Trichodesmium is widely distributed in the surface low latitude ocean where it contributes significantly to N2 fixation and primary productivity. Previous studies found nifH genes and intact Trichodesmium colonies in the sunlight-deprived meso- and bathypelagic layers of the ocean (200-4000 m depth). Yet, the ability of Trichodesmium to fix N2 in the dark ocean has not been explored. We performed 15N2 incubations in sediment traps at 170, 270 and 1000 m at two locations in the South Pacific. Sinking Trichodesmium colonies fixed N2 at similar rates than previously observed in the surface ocean (36-214 fmol N cell-1 d-1). This activity accounted for 40 ± 28% of the bulk N2 fixation rates measured in the traps, indicating that other diazotrophs were also active in the mesopelagic zone. Accordingly, cDNA nifH amplicon sequencing revealed that while Trichodesmium accounted for most of the expressed nifH genes in the traps, other diazotrophs such as Chlorobium and Deltaproteobacteria were also active. Laboratory experiments simulating mesopelagic conditions confirmed that increasing hydrostatic pressure and decreasing temperature reduced but did not completely inhibit N2 fixation in Trichodesmium. Finally, using a cell metabolism model we predict that Trichodesmium uses photosynthesis-derived stored carbon to sustain N2 fixation while sinking into the mesopelagic. We conclude that sinking Trichodesmium provides ammonium, dissolved organic matter and biomass to mesopelagic prokaryotes.
© 2022. The Author(s), under exclusive licence to International Society for Microbial Ecology.

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Year:  2022        PMID: 35835942      PMCID: PMC9478103          DOI: 10.1038/s41396-022-01289-6

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   11.217


  22 in total

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Journal:  Environ Microbiol       Date:  2012-01-06       Impact factor: 5.491

2.  An Earth-system perspective of the global nitrogen cycle.

Authors:  Nicolas Gruber; James N Galloway
Journal:  Nature       Date:  2008-01-17       Impact factor: 49.962

3.  New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of Nitrogenase (nifH) genes.

Authors:  J P Zehr; M T Mellon; S Zani
Journal:  Appl Environ Microbiol       Date:  1998-09       Impact factor: 4.792

Review 4.  Marine Non-Cyanobacterial Diazotrophs: Moving beyond Molecular Detection.

Authors:  Deniz Bombar; Ryan W Paerl; Lasse Riemann
Journal:  Trends Microbiol       Date:  2016-07-29       Impact factor: 17.079

5.  Trimethylated homoserine functions as the major compatible solute in the globally significant oceanic cyanobacterium Trichodesmium.

Authors:  Nadin Pade; Dirk Michalik; Wolfgang Ruth; Natalia Belkin; Wolfgang R Hess; Ilana Berman-Frank; Martin Hagemann
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

Review 6.  Changing perspectives in marine nitrogen fixation.

Authors:  Jonathan P Zehr; Douglas G Capone
Journal:  Science       Date:  2020-05-15       Impact factor: 47.728

Review 7.  The marine nitrogen cycle: new developments and global change.

Authors:  David A Hutchins; Douglas G Capone
Journal:  Nat Rev Microbiol       Date:  2022-02-07       Impact factor: 78.297

8.  A Simple, High-Precision, High-Sensitivity Tracer Assay for N(inf2) Fixation.

Authors:  J P Montoya; M Voss; P Kahler; D G Capone
Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

9.  DADA2: High-resolution sample inference from Illumina amplicon data.

Authors:  Benjamin J Callahan; Paul J McMurdie; Michael J Rosen; Andrew W Han; Amy Jo A Johnson; Susan P Holmes
Journal:  Nat Methods       Date:  2016-05-23       Impact factor: 28.547

10.  The Macromolecular Basis of Phytoplankton C:N:P Under Nitrogen Starvation.

Authors:  Justin D Liefer; Aneri Garg; Matthew H Fyfe; Andrew J Irwin; Ina Benner; Christopher M Brown; Michael J Follows; Anne Willem Omta; Zoe V Finkel
Journal:  Front Microbiol       Date:  2019-04-17       Impact factor: 5.640

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  1 in total

1.  Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean.

Authors:  Sophie Bonnet; Mar Benavides; Frédéric A C Le Moigne; Mercedes Camps; Antoine Torremocha; Olivier Grosso; Céline Dimier; Dina Spungin; Ilana Berman-Frank; Laurence Garczarek; Francisco M Cornejo-Castillo
Journal:  ISME J       Date:  2022-09-26       Impact factor: 11.217

  1 in total

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