Literature DB >> 35835184

Machine Learning Analysis Provides Insight into Mechanisms of Protein Particle Formation Inside Containers During Mechanical Agitation.

Nidhi G Thite1, Saba Ghazvini2, Nicole Wallace2, Naomi Feldman2, Christopher P Calderon3, Theodore W Randolph4.   

Abstract

Container choice can influence particle generation within protein formulations. Incompatibility between proteins and containers can manifest as increased particle concentrations, shifts in particle size distributions and changes in particle morphology distributions. In this study, flow imaging microscopy (FIM) combined with machine learning-based goodness-of-fit hypothesis testing algorithms were used in accelerated stability studies to investigate the impact of containers on particle formation. Containers in four major container categories subdivided into eleven container types were filled with monoclonal antibody formulations and agitated with and without headspace, producing subvisible particles. Digital images of the particles were recorded using flow imaging microscopy and analyzed with machine learning algorithms. Particle morphology distributions depended on container category and type, revealing differences that would not have been obvious by analysis of particle concentrations or container surface characteristics alone. Additionally, the algorithm was used to compare morphologies of particles generated in containers against those generated using isolated stresses at air-liquid and container-air-liquid interfaces. These comparisons showed that the morphology distributions of particles formed during agitation most closely resemble distributions that result from exposure of proteins to moving triple interface lines at points where container-air-liquid interfaces intersect. The approach described here can be used to identify dominant causes of particle generation due to protein-container interactions.
Copyright © 2022 American Pharmacists Association. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Image analysis; Machine learning; Monoclonal antibodies; Protein aggregation; Protein formulation

Mesh:

Substances:

Year:  2022        PMID: 35835184      PMCID: PMC9481670          DOI: 10.1016/j.xphs.2022.06.017

Source DB:  PubMed          Journal:  J Pharm Sci        ISSN: 0022-3549            Impact factor:   3.784


  59 in total

Review 1.  Physical stability of proteins in aqueous solution: mechanism and driving forces in nonnative protein aggregation.

Authors:  Eva Y Chi; Sampathkumar Krishnan; Theodore W Randolph; John F Carpenter
Journal:  Pharm Res       Date:  2003-09       Impact factor: 4.200

2.  Subvisible particle counting provides a sensitive method of detecting and quantifying aggregation of monoclonal antibody caused by freeze-thawing: insights into the roles of particles in the protein aggregation pathway.

Authors:  James G Barnard; Satish Singh; Theodore W Randolph; John F Carpenter
Journal:  J Pharm Sci       Date:  2010-08-27       Impact factor: 3.534

Review 3.  Protein aggregation and bioprocessing.

Authors:  Mary E M Cromwell; Eric Hilario; Fred Jacobson
Journal:  AAPS J       Date:  2006-09-15       Impact factor: 4.009

Review 4.  Protein aggregation--pathways and influencing factors.

Authors:  Wei Wang; Sandeep Nema; Dirk Teagarden
Journal:  Int J Pharm       Date:  2010-02-24       Impact factor: 5.875

Review 5.  Protein at liquid solid interfaces: Toward a new paradigm to change the approach to design hybrid protein/solid-state materials.

Authors:  Diego Coglitore; Jean-Marc Janot; Sebastien Balme
Journal:  Adv Colloid Interface Sci       Date:  2019-07-06       Impact factor: 12.984

6.  Postproduction Handling and Administration of Protein Pharmaceuticals and Potential Instability Issues.

Authors:  M Reza Nejadnik; Theodore W Randolph; David B Volkin; Christian Schöneich; John F Carpenter; Daan J A Crommelin; Wim Jiskoot
Journal:  J Pharm Sci       Date:  2018-04-14       Impact factor: 3.534

7.  Notorious but not understood: How liquid-air interfacial stress triggers protein aggregation.

Authors:  Ellen Koepf; Simon Eisele; Rudolf Schroeder; Gerald Brezesinski; Wolfgang Friess
Journal:  Int J Pharm       Date:  2017-12-26       Impact factor: 5.875

8.  Testing Precision Limits of Neural Network-Based Quality Control Metrics in High-Throughput Digital Microscopy.

Authors:  Christopher P Calderon; Dean C Ripple; Charudharshini Srinivasan; Youlong Ma; Michael J Carrier; Theodore W Randolph; Thomas F O'Connor
Journal:  Pharm Res       Date:  2022-01-26       Impact factor: 4.200

9.  Stress Factors in Primary Packaging, Transportation and Handling of Protein Drug Products and Their Impact on Product Quality.

Authors:  Linda O Narhi; Danny K Chou; Twinkle R Christian; Scott Gibson; Bharat Jagannathan; Wim Jiskoot; Susan Jordan; Alavattam Sreedhara; Lloyd Waxman; Tapan K Das
Journal:  J Pharm Sci       Date:  2022-01-23       Impact factor: 3.534

10.  Mechanism of insulin aggregation and stabilization in agitated aqueous solutions.

Authors:  V Sluzky; A M Klibanov; R Langer
Journal:  Biotechnol Bioeng       Date:  1992-10-20       Impact factor: 4.530

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