| Literature DB >> 35832190 |
Songxue Li1, Xiaoying Li2, Shuang Zhang2, Yanan Feng2, Tianshuang Jia1, Manning Zhu1, Lei Fang2, Liping Gong2, Shuang Dong2, Xianchao Kong3, Zhenzhen Wang1, Litao Sun1.
Abstract
Objective: The purpose of this study was to investigate the relationship between GSDMB gene polymorphism and genetic susceptibility to cervical cancer in the Han population in Northeast China.Entities:
Keywords: GSDMB; SNP; cervical cancer; cervical squamous intraepithelial lesion; pyrocytosis
Year: 2022 PMID: 35832190 PMCID: PMC9271821 DOI: 10.3389/fgene.2022.860727
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.772
Clinical characteristics in the control group with the CC and SIL groups.
| Control | CC | SIL | P1 | P2 | P3 | |
|---|---|---|---|---|---|---|
| Age (years) | 39.44 ± 8.22 | 49.33 ± 9.29 | 42.22 ± 9.68 |
|
|
|
| Menarche age (years) | -- | 14.92 ± 1.86 | 14.61 ± 1.90 | -- | -- |
|
| Amenorrhea n (%) | -- | 216 (44.8%) | 148 (19.1%) | -- | -- |
|
| Smoking n (%) | -- | 30 (6.22%) | 23 (2.97%) | -- | -- |
|
| Drinking n (%) | -- | 4 (0.83%) | 4 (0.52%) | -- | -- | 0.4952 |
CC, cervical cancer; SIL, cervical squamous intraepithelial lesion.
p-value (P1, comparison of controls with CC; P2, comparison of controls with SIL; P3, comparison of CC with SIL).
p values < 0.05 are considered statistically significant, and shown in bold.
Comparison of genotypes and allele distribution frequencies between the CC group and its subgroups with the healthy control group.
| Genotype and allele | Control | Case | P | OR [95% CI] | Statistical model | P′ | P′′ | OR [95% CI] |
|---|---|---|---|---|---|---|---|---|
| Controls (n= 495) | CC(n = 482) | |||||||
| AA | 259 (52.3%) | 235 (48.8%) | Dominant | 0.2054 | 0.2095 | 0.829[0.620–1.108] | ||
| AG | 189 (38.2%) | 199 (41.3%) | Recessive | 0.5305 | 0.5327 | 0.852[0.516–1.406] | ||
| GG | 47 (9.49%) | 48 (9.96%) | 0.5322 | Additive | 0.2132 | 0.2088 | 0.868[0.696–1.084] | |
| A | 707 (71.4%) | 669 (69.4%) | ||||||
| G | 283 (28.6%) | 295 (30.6%) | 0.3290 | 0.908[0.747–1.102] | ||||
| Controls (n= 495) | SCC (n = 416) | |||||||
| AA | 259 (52.3%) | 204 (49.0%) | Dominant | 0.2967 | 0.2968 | 0.851[0.628–1.152] | ||
| AG | 189 (38.2%) | 169 (40.6%) | Recessive | 0.4040 | 0.4110 | 0.801[0.476–1.348] | ||
| GG | 47 (9.49%) | 43 (10.3%) | 0.6110 | Additive | 0.2443 | 0.2437 | 0.872[0.692–1.098] | |
| A | 707 (71.4%) | 577 (69.4%) | ||||||
| G | 283 (28.6%) | 255 (30.6%) | 0.3362 | 1.104[0.902–1.351] | ||||
| Controls (n= 495) | AUC(n = 36) | |||||||
| AA | 259 (52.3%) | 16 (44.4%) | Dominant | 0.2542 | 0.2631 | 0.659[0.321–1.350] | ||
| AG | 189 (38.2%) | 16 (44.4%) | Recessive | 0.5203 | 0.5204 | 0.680[0.209–2.207] | ||
| GG | 47 (9.49%) | 4 (11.1%) | 0.6589 | Additive | 0.2441 | 0.2462 | 0.727[0.425–1.243] | |
| A | 707 (71.4%) | 48 (66.7%) | ||||||
| G | 283 (28.6%) | 24 (33.3%) | 0.3909 | 0.801[0.481–1.332] |
CC, cervical cancer; SCC, squamous carcinoma of cervical; AUC, adenocarcinoma of the uterine cervical; OR, odds ratio; CI, confidence interval.
P: p-value (control vs. CC; control vs. SCC; control vs. AUC ); p-values <0.05 are shown in bold.
P’: age was adjusted.
P”: the p-value was calculated using 10,000 permutations for each model to correct the multiple tests.
Comparison of genotypes and allele distribution frequencies between the SIL group and its subgroups with the healthy control group.
| Genotype and allele | Control | Case | P | OR [95% CI] | Statistical model | P′ | P′′ | OR [95% CI] |
|---|---|---|---|---|---|---|---|---|
| Control (n= 495) | SIL (n = 775) | |||||||
| AA | 259 (52.3%) | 351 (45.3%) | Dominant |
|
| 0.764[0.607–0.961] | ||
| AG | 189 (38.2%) | 337 (43.5%) | Recessive | 0.1861 | 0.1881 | 0.773[0.528–1.132] | ||
| GG | 47 (9.49%) | 87 (11.2%) |
| Additive |
|
| 0.814[0.684–0.968] | |
| A | 707 (71.4%) | 1,039 (67.0%) | ||||||
| G | 283 (28.6%) | 511 (33.0%) |
| 0.814[0.684–0.968] | ||||
| Control (n= 495) | HSIL (n = 619) | |||||||
| AA | 259 (52.3%) | 283 (45.7%) | Dominant |
|
| 0.773[0.608–0.983] | ||
| AG | 189 (38.2%) | 270 (43.6%) | Recessive | 0.3067 | 0.3102 | 0.811[0.543–1.211] | ||
| GG | 47 (9.49%) | 66 (10.7%) | 0.0903 | Additive |
|
| 0.827[0.689–0.992] | |
| A | 707 (71.4%) | 836 (67.5%) | ||||||
| G | 283 (28.6%) | 402 (32.5%) |
| 0.832[0.694–0.999] | ||||
| Control (n= 495) | LSIL (n = 156) | |||||||
| AA | 259 (52.3%) | 68 (43.6%) | Dominant | 0.0631 | 0.0633 | 0.702[0.484–1.019] | ||
| AG | 189 (38.2%) | 67 (42.9%) | Recessive | 0.0928 | 0.0916 | 0.614[0.348–1.084] | ||
| GG | 47 (9.49%) | 21 (13.5%) | 0.1180 | Additive |
|
| 0.740[0.564–0.973] | |
| A | 707 (71.4%) | 203 (65.1%) | ||||||
| G | 283 (28.6%) | 109 (34.9%) |
| 0.745[0.569–0.977] |
SIL, cervical squamous intraepithelial lesion; HSIL, high-grade cervical squamous intraepithelial lesion; LSIL, low-grade cervical squamous intraepithelial lesion; OR, odds ratio; CI, confidence interval.
P: p-value (control vs. SIL; control vs. HSIL; control vs. LSIL ); p values <0.05 are considered statistically significant, and shown in bold.
P’: age was adjusted.
P”: the p-value was calculated using 10,000 permutations for each model to correct the multiple tests.
Comparison of genotypes and allele distribution frequencies between the CC group and the SIL group.
| Genotype and allele | CC (n = 482) | SIL (n = 775) | P | OR [95% CI] | Statistical model | P′ | P′′ | OR [95% CI] |
|---|---|---|---|---|---|---|---|---|
| AA | 235 (48.8%) | 351 (45.3%) | Dominant | 0.2191 | 0.2195 | 1.165[0.913–1.485] | ||
| AG | 199 (41.3%) | 337 (43.5%) | Recessive | 0.5878 | 0.5914 | 1.116[0.751–1.657] | ||
| GG | 48 (9.96%) | 87 (11.2%) | 0.4616 | Additive | 0.2419 | 0.2423 | 1.115[0.929–1.339] | |
| A | 669 (69.4%) | 1,039 (67.0%) | ||||||
| G | 295 (30.6%) | 511 (33.0%) | 0.2165 | 1.115[0.938–1.326] |
CC, cervical cancer; SIL, cervical squamous intraepithelial lesion; OR, odds ratio; CI, confidence interval.
P: p-value (CC vs. SIL ); p-values <0.05 are shown in bold.
P’: age was adjusted.
P”: the p-value was calculated using 10,000 permutations for each model to correct the multiple tests.
Comparison of genotypes and allele distribution frequencies between the SCC group and AUC group.
| Genotype and allele | SCC (n = 416) | AUC (n = 36) | P | OR [95% CI] | Statistical model | P′ | P′′ | OR [95% CI] |
|---|---|---|---|---|---|---|---|---|
| AA | 204 (49.0%) | 16 (44.4%) | Dominant | 0.6073 | 0.6082 | 1.197[0.603–2.374] | ||
| AG | 169 (40.6%) | 16 (44.4%) | Recessive | 0.8808 | 0.8827 | 1.087[0.367–3.222] | ||
| GG | 43 (10.3%) | 4 (11.1%) | 0.8690 | Additive | 0.6495 | 0.6511 | 1.123[0.680–1.856] | |
| A | 577 (69.4%) | 48 (66.7%) | ||||||
| G | 255 (30.6%) | 24 (33.3%) | 0.6362 | 0.884[0.530–1.474] |
SCC, squamous carcinoma of cervical; AUC, adenocarcinoma of the uterine cervical; OR, odds ratio; CI, confidence interval.
P: p-value (SCC vs. AUC ); p-values <0.05 are shown in bold.
P’: age was adjusted.
P”: the p-value was calculated using 10,000 permutations for each model to correct the multiple tests.
Comparison of genotypes and allele distribution frequencies between the HSIL group and LSIL group.
| Genotype and allele | HSIL (n = 619) | LSIL (n = 156) | P | OR [95% CI] | Statistical model | P′ | P′′ | OR [95% CI] |
|---|---|---|---|---|---|---|---|---|
| AA | 283(45.7%) | 68 (43.6%) | Dominant | 0.5822 | 0.5860 | 1.105[0.774–1.578] | ||
| AG | 270(43.6%) | 67 (42.9%) | Recessive | 0.2686 | 0.2713 | 1.347[0.794–2.286] | ||
| GG | 66(10.7%) | 21 (13.5%) | 0.6043 | Additive | 0.3525 | 0.3554 | 1.132[0.872–1.470] | |
| A | 836(67.5%) | 203(65.1%) | ||||||
| G | 402(32.5%) | 109(34.9%) | 0.4080 | 0.896[0.690–1.163] |
HSIL, high-grade cervical squamous intraepithelial lesion; LSIL, low-grade cervical squamous intraepithelial lesion; OR, odds ratio; CI, confidence interval.
P: p-value (HSIL, vs. LSIL ); p-values <0.05 are shown in bold.
P’: age was adjusted.
P”: the p-value was calculated using 10,000 permutations for each model to correct the multiple tests.
FIGURE 1Results of chi-square tests show the comparison of genotypes and allele distribution frequencies between groups.
FIGURE 2Results of the logistic regression analysis after adjusting for age show the comparison of genotypes and allele distribution frequencies between groups.
FIGURE 3Results after 10,000 permutation tests show the comparison of genotypes and allele distribution frequencies between groups.
Comparison of genotype distribution frequencies with clinical parameters in the CC group.
| Parameter | ALL | AA | AG | GG | P | P′ | OR [95% CI] | |
|---|---|---|---|---|---|---|---|---|
| Histology | 0.8204 | |||||||
| SCC | 416 | 198 | 175 | 43 | AG/AA | 0.6203 | 0.834 [0.406–1.712] | |
| AUC | 36 | 19 | 14 | 3 | GG/AA | 0.6206 | 0.727 [0.206–2.567] | |
| Menarche age | 0.7900 | |||||||
| <15 years | 229 | 113 | 91 | 25 | AG/AA | 0.5695 | 1.119 [0.760–1.646] | |
| ≥15 years | 234 | 111 | 100 | 23 | GG/AA | 0.8370 | 0.937 [0.502–1.748] | |
| Amenorrhea | 0.1083 | |||||||
| Yes | 220 | 96 | 97 | 27 | AG/AA | 0.1336 | 0.744 [0.506–1.095] | |
| No | 246 | 129 | 97 | 20 | GG/AA | 0.0663 | 0.551 [0.292–1.041] | |
| Parity | 0.2469 | |||||||
| Never | 29 | 10 | 16 | 3 | AG/AA | 0.1002 | 0.504 [0.222–1.141] | |
| Ever | 396 | 196 | 158 | 42 | GG/AA | 0.6207 | 0.714 [0.188–2.708] | |
|
| 0.7248 | |||||||
| ( - ) | 8 | 5 | 3 | 0 | AG/AA | 0.8795 | 1.123 [0.250–5.044] | |
| ( + ) | 83 | 46 | 31 | 6 | GG/AA | 0.9740 | 78185.319 | |
| D-dimer | 0.8988 | |||||||
| ≤243 ng/ml | 392 | 188 | 163 | 41 | AG/AA | 0.8218 | 1.086 [0.531–2.217] | |
| >243 ng/ml | 36 | 17 | 16 | 3 | GG/AA | 0.7446 | 0.809 [0.227–2.890] | |
| SCC | 0.4132 | |||||||
| ≤1.5 ng/ml | 205 | 99 | 89 | 17 | AG/AA | 0.6246 | 0.907 [0.613–1.342] | |
| >1.5 ng/ml | 245 | 119 | 97 | 29 | GG/AA | 0.2951 | 1.419 [0.737–2.733] | |
| CEA | 0.6549 | |||||||
| ≤5 ng/ml | 183 | 81 | 80 | 22 | AG/AA | 0.8885 | 0.945 [0.428–2.085] | |
| >5 ng/ml | 31 | 15 | 14 | 2 | GG/AA | 0.3679 | 0.491 [0.104–2.310] | |
| CA125 | 0.3928 | |||||||
| ≤35 U/ml | 197 | 88 | 86 | 23 | AG/AA | 0.5395 | 1.302 [0.560–3.028] | |
| >35 U/ml | 26 | 11 | 14 | 1 | GG/AA | 0.3238 | 0.348 [0.043–2.835] | |
|
| 0.0898 | |||||||
| ≤37 U/ml | 194 | 83 | 87 | 24 | AG/AA | 0.1570 | 0.477 [0.171–1.330] | |
| >37 U/ml | 18 | 12 | 6 | 0 | GG/AA | 0.9654 | 0.000 | |
P: p-value; p-values <0.05 are shown in bold.
P’: logistic regression analysis.
Comparison of allele distribution frequencies with clinical parameters in the SIL group.
| Parameter | ALL | A | G | P | P′ | OR [95% CI] |
|---|---|---|---|---|---|---|
| Histology | 0.2180 | 0.2183 | 0.849[0.655–1.102] | |||
| HSIL | 1,238 | 839 | 399 | |||
| LSIL | 312 | 200 | 112 | |||
| Menarche age | 0.3557 | 0.3558 | 0.903[0.728–1.121] | |||
| <15 years | 890 | 588 | 302 | |||
| ≥15 years | 650 | 444 | 206 | |||
| Amenorrhea | 0.9314 | 0.9315 | 1.012[0.776–1.319] | |||
| Yes | 312 | 210 | 102 | |||
| No | 1,214 | 814 | 400 | |||
| Parity | 0.5893 | 0.5895 | 1.121[0.741–1.696] | |||
| Never | 114 | 79 | 35 | |||
| Ever | 1,308 | 874 | 434 | |||
| HPV | 0.8422 | 0.8422 | 0.943[0.530–1.677] | |||
| ( - ) | 54 | 35 | 19 | |||
| ( + ) | 880 | 582 | 298 | |||
| D-dimer | 0.5960 | 0.5965 | 1.216[0.590–2.508] | |||
| ≤243 ng/ml | 1,486 | 995 | 491 | |||
| >243 ng/ml | 32 | 20 | 12 | |||
| SCC | 0.6301 | 0.6302 | 0.903[0.596–1.369] | |||
| ≤1.5 ng/ml | 944 | 630 | 314 | |||
| >1.5 ng/ml | 116 | 80 | 36 | |||
| CEA | 0.5861 | 0.5884 | 0.694[0.185–2.607] | |||
| ≤5 ng/ml | 382 | 258 | 124 | |||
| >5 ng/ml | 12 | 9 | 3 | |||
| CA125 | 0.9470 | 0.9468 | 1.022[0.532–1.963] | |||
| ≤35 U/ml | 386 | 262 | 124 | |||
| >35 U/ml | 46 | 31 | 15 | |||
| CA199 | 0.9242 | 0.9238 | 1.039[0.471–2.292] | |||
| ≤37 U/ml | 354 | 239 | 115 | |||
| >37 U/ml | 30 | 20 | 10 | |||
P: p-value; p-values <0.05 are shown in bold.
P’: logistic regression analysis.
Comparison of allele distribution frequencies with clinical parameters in the CC group.
| Parameter | ALL | A | G | P | P′ | OR [95% CI] |
|---|---|---|---|---|---|---|
| Histology | 0.5275 | 0.5280 | 0.841[0.492–1.438] | |||
| SCC | 832 | 571 | 261 | |||
| AUC | 72 | 52 | 20 | |||
| Menarche age | 0.8926 | 0.8926 | 1.019[0.772–1.347] | |||
| <15 years | 458 | 317 | 141 | |||
| ≥15 years | 468 | 322 | 146 | |||
| Amenorrhea |
|
| 0.739[0.559–0.976] | |||
| Yes | 440 | 289 | 151 | |||
| No | 492 | 355 | 137 | |||
| Parity | 0.2413 | 0.2428 | 0.720[0.415–1.250] | |||
| Never | 58 | 36 | 22 | |||
| Ever | 792 | 550 | 242 | |||
| HPV | 0.5295 | 0.5320 | 1.515[0.412–5.573] | |||
| ( - ) | 16 | 13 | 3 | |||
| ( + ) | 166 | 123 | 43 | |||
| D-dimer | 0.9031 | 0.9036 | 0.968[0.573–1.634] | |||
| ≤243 ng/ml | 784 | 539 | 245 | |||
| >243 ng/ml | 72 | 50 | 22 | |||
| SCC | 0.5975 | 0.5981 | 1.079[0.812–1.435] | |||
| ≤1.5 ng/ml | 410 | 287 | 123 | |||
| >1.5 ng/ml | 490 | 335 | 155 | |||
| CEA | 0.4535 | 0.4542 | 0.798[0.443–1.440] | |||
| ≤5 ng/ml | 366 | 242 | 124 | |||
| >5 ng/ml | 62 | 44 | 18 | |||
| CA125 | 0.6940 | 0.6941 | 0.882[0.472–1.648] | |||
| ≤35 U/ml | 394 | 262 | 132 | |||
| >35 U/ml | 52 | 36 | 16 | |||
| CA199 |
|
| 0.375[0.152–0.923] | |||
| ≤37 U/ml | 388 | 253 | 135 | |||
| >37 U/ml | 36 | 30 | 6 | |||
P: p-value; p values <0.05 are considered statistically significant, and shown in bold.
P’: logistic regression analysis.
Comparison of genotype distribution frequencies with clinical parameters in the SIL group.
| Parameter | ALL | AA | AG | GG | P | P′ | OR [95% CI] | |
|---|---|---|---|---|---|---|---|---|
| Histology | 0.4017 | |||||||
| HSIL | 619 | 285 | 269 | 65 | AG/AA | 0.6491 | 0.916 [0.628–1.336] | |
| LSIL | 156 | 66 | 68 | 22 | GG/AA | 0.1781 | 0.684 [0.394–1.189] | |
| Menarche age | 0.1808 | |||||||
| <15 years | 445 | 201 | 186 | 58 | AG/AA | 0.6156 | 1.081 [0.798–1.463] | |
| ≥15 years | 325 | 148 | 148 | 29 | GG/AA | 0.1244 | 0.679 [0.414–1.113] | |
| Amenorrhea | 0.4376 | |||||||
| Yes | 156 | 68 | 74 | 14 | AG/AA | 0.3993 | 0.853 [0.589–1.235] | |
| No | 607 | 278 | 258 | 71 | GG/AA | 0.5038 | 1.240 [0.660–2.332] | |
| Parity | 0.5740 | |||||||
| Never | 57 | 29 | 21 | 7 | AG/AA | 0.3058 | 1.357 [0.756–2.436] | |
| Ever | 654 | 293 | 288 | 73 | GG/AA | 0.9427 | 1.032 [0.435–2.450] | |
| HPV | 0.4522 | |||||||
| ( - ) | 27 | 10 | 15 | 2 | AG/AA | 0.3170 | 0.656 [0.288–1.497] | |
| ( + ) | 440 | 195 | 192 | 53 | GG/AA | 0.6978 | 1.359 [0.289–6.391] | |
| D-dimer | 0.6396 | |||||||
| ≤243 ng/ml | 743 | 336 | 323 | 84 | AG/AA | 0.8382 | 0.892 [0.296–2.681] | |
| >243 ng/ml | 16 | 7 | 6 | 3 | GG/AA | 0.4418 | 1.714 [0.434–6.770] | |
| SCC | 0.5749 | |||||||
| ≤1.5 ng/ml | 472 | 211 | 208 | 53 | AG/AA | 0.7599 | 1.092 [0.620–1.926] | |
| >1.5 ng/ml | 58 | 26 | 28 | 4 | GG/AA | 0.3802 | 0.612 [0.205–1.831] | |
| CEA | 0.7043 | |||||||
| ≤5 ng/ml | 191 | 87 | 84 | 20 | AG/AA | 0.9663 | 1.036 [0.203–5.276] | |
| >5 ng/ml | 6 | 3 | 3 | 0 | GG/AA | 0.9719 | 0.000 | |
| CA125 | 0.3617 | |||||||
| ≤35 U/ml | 193 | 90 | 82 | 21 | AG/AA | 0.3162 | 1.585 [0.644–3.903] | |
| >35 U/ml | 23 | 9 | 13 | 1 | GG/AA | 0.4929 | 0.476 [0.057–3.967] | |
| CA199 | 0.9019 | |||||||
| ≤37 U/ml | 177 | 80 | 79 | 18 | AG/AA | 0.8067 | 0.868 [0.279–2.697] | |
| >37 U/ml | 15 | 7 | 6 | 2 | GG/AA | 0.7765 | 1.270 [0.243–6.630] | |
P: p-value; p-values <0.05 are shown in bold.
P’: logistic regression analysis.