Literature DB >> 35831657

Standardized annotation of translated open reading frames.

Jonathan M Mudge1, Jorge Ruiz-Orera2, John R Prensner3,4,5, Sebastiaan van Heesch6, Marie A Brunet7, Ferriol Calvet8, Irwin Jungreis9,10, Jose Manuel Gonzalez8, Michele Magrane8, Thomas F Martinez11,12, Jana Felicitas Schulz13, Yucheng T Yang14,15, M Mar Albà16,17, Julie L Aspden18,19, Pavel V Baranov20, Ariel A Bazzini21,22, Elspeth Bruford8,23, Maria Jesus Martin8, Lorenzo Calviello24,25, Anne-Ruxandra Carvunis26,27, Jin Chen28, Juan Pablo Couso29, Eric W Deutsch30, Paul Flicek8, Adam Frankish8, Mark Gerstein14,31,32,33, Norbert Hubner13,34,35, Nicholas T Ingolia36, Manolis Kellis9,10, Gerben Menschaert37, Robert L Moritz30, Uwe Ohler38,39,40, Xavier Roucou41, Alan Saghatelian11, Jonathan S Weissman42,43,44.   

Abstract

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Year:  2022        PMID： 35831657     DOI： 10.1038/s41587-022-01369-0

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   68.164


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  2 in total

1.  Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution.

Authors:  Sooncheol Lee; Botao Liu; Soohyun Lee; Sheng-Xiong Huang; Ben Shen; Shu-Bing Qian
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-27       Impact factor: 11.205

2.  OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes.

Authors:  Marie A Brunet; Mylène Brunelle; Jean-François Lucier; Vivian Delcourt; Maxime Levesque; Frédéric Grenier; Sondos Samandi; Sébastien Leblanc; Jean-David Aguilar; Pascal Dufour; Jean-Francois Jacques; Isabelle Fournier; Aida Ouangraoua; Michelle S Scott; François-Michel Boisvert; Xavier Roucou
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971
  2 in total
  2 in total

1.  Mitochondrial DNA variation in Alzheimer's disease reveals a unique microprotein called SHMOOSE.

Authors:  Brendan Miller; Su-Jeong Kim; Hemal H Mehta; Kevin Cao; Hiroshi Kumagai; Neehar Thumaty; Naphada Leelaprachakul; Henry Jiao; Joan Vaughan; Jolene Diedrich; Alan Saghatelian; Thalida E Arpawong; Eileen M Crimmins; Nilüfer Ertekin-Taner; Meral A Tubi; Evan T Hare; Meredith N Braskie; Léa Décarie-Spain; Scott E Kanoski; Francine Grodstein; David A Bennett; Lu Zhao; Arthur W Toga; Junxiang Wan; Kelvin Yen; Pinchas Cohen
Journal:  Mol Psychiatry       Date:  2022-09-21       Impact factor: 13.437

2.  OpenVar: functional annotation of variants in non-canonical open reading frames.

Authors:  Marie A Brunet; Sébastien Leblanc; Xavier Roucou
Journal:  Cell Biosci       Date:  2022-08-14       Impact factor: 9.584
  2 in total

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