Literature DB >> 35819773

Optogenetic Control of Membrane Trafficking Using Light-Activated Reversible Inhibition by Assembly Trap of Intracellular Membranes (IM-LARIAT).

Bobae Hyeon1, Mai Khanh Nguyen2, Won Do Heo3,4.   

Abstract

Intracellular membrane trafficking is a dynamic and complex cellular process. To study membrane trafficking with a high spatiotemporal resolution, we present an optogenetic method based on a blue-light inducible oligomerization of Rab GTPases, termed light-activated reversible inhibition by assembly trap of intracellular membranes (IM-LARIAT). In this chapter, we focus on the optical disruption of the dynamics and functions of previously studied intracellular membrane trafficking events, including transferrin recycling and growth cone regulation in relation to specific Rab GTPases. To aid general application, we provide a detailed description of transfection, imaging with a confocal microscope, and analysis of data.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  CIB1; CRY2; Confocal microscope; IM-LARIAT; Intracellular trafficking; Optogenetics; Organelle transport; PHR; Photoactivation; Rab GTPase; Vesicle fusion

Mesh:

Substances:

Year:  2022        PMID: 35819773     DOI: 10.1007/978-1-0716-2209-4_20

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  15 in total

Review 1.  Rab GTPases as coordinators of vesicle traffic.

Authors:  Harald Stenmark
Journal:  Nat Rev Mol Cell Biol       Date:  2009-07-15       Impact factor: 94.444

Review 2.  Role of Rab GTPases in membrane traffic and cell physiology.

Authors:  Alex H Hutagalung; Peter J Novick
Journal:  Physiol Rev       Date:  2011-01       Impact factor: 37.312

Review 3.  From observing to controlling: Inducible control of organelle dynamics and interactions.

Authors:  Josiah B Passmore; Wilco Nijenhuis; Lukas C Kapitein
Journal:  Curr Opin Cell Biol       Date:  2021-03-08       Impact factor: 8.382

4.  Optogenetic oligomerization of Rab GTPases regulates intracellular membrane trafficking.

Authors:  Mai Khanh Nguyen; Cha Yeon Kim; Jin Man Kim; Byung Ouk Park; Sangkyu Lee; Hyerim Park; Won Do Heo
Journal:  Nat Chem Biol       Date:  2016-04-11       Impact factor: 15.040

5.  Selective inhibitor of endosomal trafficking pathways exploited by multiple toxins and viruses.

Authors:  Eugene J Gillespie; Chi-Lee C Ho; Kavitha Balaji; Daniel L Clemens; Gang Deng; Yao E Wang; Heidi J Elsaesser; Batcha Tamilselvam; Amandeep Gargi; Shandee D Dixon; Bryan France; Brian T Chamberlain; Steven R Blanke; Genhong Cheng; Juan Carlos de la Torre; David G Brooks; Michael E Jung; John Colicelli; Robert Damoiseaux; Kenneth A Bradley
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-04       Impact factor: 11.205

Review 6.  Rab GTPase regulation of membrane identity.

Authors:  Suzanne R Pfeffer
Journal:  Curr Opin Cell Biol       Date:  2013-04-29       Impact factor: 8.382

Review 7.  Lights, cytoskeleton, action: Optogenetic control of cell dynamics.

Authors:  Torsten Wittmann; Alessandro Dema; Jeffrey van Haren
Journal:  Curr Opin Cell Biol       Date:  2020-05-01       Impact factor: 8.382

8.  Thirty-one flavors of Drosophila rab proteins.

Authors:  Jun Zhang; Karen L Schulze; P Robin Hiesinger; Kaye Suyama; Stream Wang; Matthew Fish; Melih Acar; Roger A Hoskins; Hugo J Bellen; Matthew P Scott
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

9.  Optogenetic control of organelle transport and positioning.

Authors:  Petra van Bergeijk; Max Adrian; Casper C Hoogenraad; Lukas C Kapitein
Journal:  Nature       Date:  2015-01-07       Impact factor: 49.962

10.  An optimized toolbox for the optogenetic control of intracellular transport.

Authors:  Wilco Nijenhuis; Mariëlle M P van Grinsven; Lukas C Kapitein
Journal:  J Cell Biol       Date:  2020-04-06       Impact factor: 10.539

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