Literature DB >> 35814195

Lipid profiling using Raman and a modified support vector machine algorithm.

Mariana C Potcoava1, Gregory L Futia2, Emily A Gibson2, Isabel R Schlaepfer3.   

Abstract

Lipid droplets are dynamic organelles that play important cellular roles. They are composed of a phospholipid membrane and a core of triglycerides and sterol esters. Fatty acids have important roles in phospholipid membrane formation, signaling, and synthesis of triglycerides as energy storage. Better non-invasive tools for profiling and measuring cellular lipids are needed. Here we demonstrate the potential of Raman spectroscopy to determine with high accuracy the composition changes of the fatty acids and cholesterol found in the lipid droplets of prostate cancer cells treated with various fatty acids. The methodology uses a modified least squares fitting (LSF) routine that uses highly discriminatory wavenumbers between the fatty acids present in the sample using a support vector machine algorithm. Using this new LSF routine, Raman micro-spectroscopy can become a better non-invasive tool for profiling and measuring fatty acids and cholesterol for cancer biology.

Entities:  

Keywords:  LNCaP cells; Raman spectroscopy; cholesterol; fatty acids; lipid droplets; support vector machine

Year:  2021        PMID: 35814195      PMCID: PMC9269992          DOI: 10.1002/jrs.6238

Source DB:  PubMed          Journal:  J Raman Spectrosc        ISSN: 0377-0486            Impact factor:   2.727


  40 in total

1.  Raman spectroscopic analysis of biochemical changes in individual triglyceride-rich lipoproteins in the pre- and postprandial state.

Authors:  J W Chan; D Motton; J C Rutledge; N L Keim; T Huser
Journal:  Anal Chem       Date:  2005-09-15       Impact factor: 6.986

2.  A critical evaluation of Raman spectroscopy for the analysis of lipids: fatty acid methyl esters.

Authors:  J Renwick Beattie; Steven E J Bell; Bruce W Moss
Journal:  Lipids       Date:  2004-05       Impact factor: 1.880

3.  Label-free imaging and analysis of the effects of lipolysis products on primary hepatocytes.

Authors:  Iwan W Schie; Jian Wu; Tyler Weeks; Mark A Zern; John C Rutledge; Thomas Huser
Journal:  J Biophotonics       Date:  2010-09-28       Impact factor: 3.207

4.  Classification and prediction of HCC tissues by Raman imaging with identification of fatty acids as potential lipid biomarkers.

Authors:  T Tolstik; C Marquardt; C Beleites; C Matthäus; C Bielecki; M Bürger; C Krafft; O Dirsch; U Settmacher; J Popp; A Stallmach
Journal:  J Cancer Res Clin Oncol       Date:  2014-09-20       Impact factor: 4.553

5.  Fatty acids from very low-density lipoprotein lipolysis products induce lipid droplet accumulation in human monocytes.

Authors:  Laura J den Hartigh; Jaime E Connolly-Rohrbach; Samantha Fore; Thomas R Huser; John C Rutledge
Journal:  J Immunol       Date:  2010-03-05       Impact factor: 5.422

6.  Raman spectroscopy of normal and diseased human breast tissues.

Authors:  C J Frank; R L McCreery; D C Redd
Journal:  Anal Chem       Date:  1995-03-01       Impact factor: 6.986

7.  Effects of dietary fatty acids and cholesterol excess on liver injury: A lipidomic approach.

Authors:  Gaetano Serviddio; Francesco Bellanti; Rosanna Villani; Rosanna Tamborra; Chiara Zerbinati; Maria Blonda; Marco Ciacciarelli; Giuseppe Poli; Gianluigi Vendemiale; Luigi Iuliano
Journal:  Redox Biol       Date:  2016-09-09       Impact factor: 11.799

8.  Assessing fatty acid-induced lipotoxicity and its therapeutic potential in glioblastoma using stimulated Raman microscopy.

Authors:  Yuhao Yuan; Niraj Shah; Mohammad I Almohaisin; Soumit Saha; Fake Lu
Journal:  Sci Rep       Date:  2021-04-01       Impact factor: 4.379

9.  Astaxanthin as a new Raman probe for biosensing of specific subcellular lipidic structures: can we detect lipids in cells under resonance conditions?

Authors:  Krzysztof Czamara; Adriana Adamczyk; Marta Stojak; Basseem Radwan; Malgorzata Baranska
Journal:  Cell Mol Life Sci       Date:  2020-12-08       Impact factor: 9.261

10.  The lipid phenotype of breast cancer cells characterized by Raman microspectroscopy: towards a stratification of malignancy.

Authors:  Claudia Nieva; Monica Marro; Naiara Santana-Codina; Satish Rao; Dmitri Petrov; Angels Sierra
Journal:  PLoS One       Date:  2012-10-17       Impact factor: 3.240

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