Literature DB >> 35813028

CRISPR/Cas9 Gene Editing of HeLa Cells to Tag Proteins with mNeonGreen.

Sachin Surve1, Alexander Sorkin1.   

Abstract

Subcellular localization dynamics of proteins involved in signal transduction processes is crucial in determining the signaling outcome. However, there is very limited information about the localization of endogenous signaling proteins in living cells. For example, biochemical mechanisms underlying the signaling pathway from epidermal growth factor (EGF) receptor (EGFR) to RAS-RAF and ERK1/2/MAPK are well understood, whereas the operational domains of this pathway in the cell remain poorly characterized. Tagging of endogenous components of signaling pathways with fluorescent proteins allows more accurate characterization of their intracellular dynamics at their native expression levels controlled by endogenous regulatory mechanisms, thus avoiding possible tainting effects of overexpression and mistargeting. In this study, we describe methodological approaches to label components of the EGFR-RAS-MAPK pathway, such as Grb2, KRAS, and NRAS, with the fluorescent protein mNeonGreen (mNG) using CRISPR/Cas9 gene-editing, as well as generation of homozygous single-cell clones of the edited target protein.
Copyright © 2022 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  CRISPR-Cas9; EGF receptor; KRAS; NRAS; mNeonGreen

Year:  2022        PMID: 35813028      PMCID: PMC9183963          DOI: 10.21769/BioProtoc.4415

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

1.  NGF signaling from clathrin-coated vesicles: evidence that signaling endosomes serve as a platform for the Ras-MAPK pathway.

Authors:  C L Howe; J S Valletta; A S Rusnak; W C Mobley
Journal:  Neuron       Date:  2001-12-06       Impact factor: 17.173

2.  Isolated endosomes from quiescent rat liver contain the signal transduction machinery. Differential distribution of activated Raf-1 and Mek in the endocytic compartment.

Authors:  A Pol; M Calvo; C Enrich
Journal:  FEBS Lett       Date:  1998-12-11       Impact factor: 4.124

3.  Genome engineering using the CRISPR-Cas9 system.

Authors:  F Ann Ran; Patrick D Hsu; Jason Wright; Vineeta Agarwala; David A Scott; Feng Zhang
Journal:  Nat Protoc       Date:  2013-10-24       Impact factor: 13.491

4.  Endocytosis separates EGF receptors from endogenous fluorescently labeled HRas and diminishes receptor signaling to MAP kinases in endosomes.

Authors:  Itziar Pinilla-Macua; Simon C Watkins; Alexander Sorkin
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-08       Impact factor: 11.205

5.  EGFR-RAS-MAPK signaling is confined to the plasma membrane and associated endorecycling protrusions.

Authors:  Sachin Surve; Simon C Watkins; Alexander Sorkin
Journal:  J Cell Biol       Date:  2021-09-13       Impact factor: 8.077

Review 6.  Ras oncogenes: split personalities.

Authors:  Antoine E Karnoub; Robert A Weinberg
Journal:  Nat Rev Mol Cell Biol       Date:  2008-07       Impact factor: 94.444

Review 7.  Mechanisms for Regulating and Organizing Receptor Signaling by Endocytosis.

Authors:  Mark von Zastrow; Alexander Sorkin
Journal:  Annu Rev Biochem       Date:  2021-02-19       Impact factor: 27.258

8.  EGF receptor signaling, phosphorylation, ubiquitylation and endocytosis in tumors in vivo.

Authors:  Itziar Pinilla-Macua; Alexandre Grassart; Umamaheswar Duvvuri; Simon C Watkins; Alexander Sorkin
Journal:  Elife       Date:  2017-12-21       Impact factor: 8.140

9.  Localization dynamics of endogenous fluorescently labeled RAF1 in EGF-stimulated cells.

Authors:  Sachin V Surve; Paul J Myers; Samantha A Clayton; Simon C Watkins; Matthew J Lazzara; Alexander Sorkin
Journal:  Mol Biol Cell       Date:  2018-12-26       Impact factor: 4.138

10.  A clathrin-dependent pathway leads to KRas signaling on late endosomes en route to lysosomes.

Authors:  Albert Lu; Francesc Tebar; Blanca Alvarez-Moya; Cristina López-Alcalá; Maria Calvo; Carlos Enrich; Neus Agell; Takeshi Nakamura; Michiyuki Matsuda; Oriol Bachs
Journal:  J Cell Biol       Date:  2009-03-16       Impact factor: 10.539

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