| Literature DB >> 35804555 |
Chenlei Li1, Chenglei Song1, Kunlong Qi1, Yingke Liu1, Yaqing Dou1, Xiuling Li1, Ruimin Qiao1, Kejun Wang1, Xuelei Han1, Xinjian Li1.
Abstract
The estrus cycle of multiparous Large White sows was divided into three stages to solve the problems of heavy workload and low accuracy of the traditional estrus identification method in pig production. Saliva protein was extracted from the oral saliva of multiparous sows. Label-free quantitative proteomics was used to detect salivary proteome, and MaxQuant software was used for quality control. Results showed that 246 proteins were identified in the three stages, where 40 proteins were significantly different (p < 0.05). The total proteins identified were enriched by STEM software and the protein function was annotated by using the ClueGO plug-in in the Cytoscape software. The results were enriched to eight different trends. The annotated items were related to protein synthesis and processing and estrogen response. Gene ontology and the Kyoto Encyclopedia of Genes and Genomes enrichment analysis of differential proteins involved in the pathways and entries included oocyte meiosis, response to estradiol, and oogenesis. Further interaction analysis showed that an interaction occurred between P00355, F1SHL9, P28491, F1SDR7, F2Z558, F1RYY6, and F2Z5G3 proteins. The findings served as a basis for revealing the changes in salivary protein content in the sow estrus cycle and provided a reference for the development of an estrus identification kit/test strip in the next step.Entities:
Keywords: Large White sow; estrus identification; protein interaction; salivary proteomics
Year: 2022 PMID: 35804555 PMCID: PMC9264986 DOI: 10.3390/ani12131656
Source DB: PubMed Journal: Animals (Basel) ISSN: 2076-2615 Impact factor: 3.231
Statistics and analysis of salivary protein in different stages of estrus cycle.
| Sample | MS/MS | Peptide Number | Protein Number |
|---|---|---|---|
| PE | 4003 | 3405 | 231 |
| E | 2200 | 2179 | 219 |
| AE | 2813 | 2589 | 229 |
Figure 1Identification and analysis of salivary proteins during the estrus cycle. (a) Number of peptides with different molecular weights. (b) Number of proteins recognizing different peptides.
Figure 2Heat map of salivary protein clustering during estrus cycle.
Figure 3Analysis on the expression trend of salivary protein in the estrus cycle of Large White sows. (a) Overview of all trends. (b) Profiles ordered based on the p value significance of the number of genes assigned versus expected.
Figure 4ClueGO network of GO terms. (a–c) represent the GO annotation results from trends 5–7, respectively. Each node represents a term, and different node colors represent various categories to which they belong.
Figure 5Heat map of salivary differential proteins in estrus cycle.
Figure 6Functional enrichment analysis of different proteins in the saliva of Large White sows. (a) GO enrichment analysis of salivary differential proteins during the estrus cycle. (b) Enrichment analysis of salivary differential protein KEGG pathway during the estrus cycle.
Figure 7Analysis of salivary differential protein network interaction in estrus cycle.