Literature DB >> 35801637

Modelling the response to vaccine in non-human primates to define SARS-CoV-2 mechanistic correlates of protection.

Romain Marlin1, Mélanie Prague2, Marie Alexandre2, Severin Coleon3,4, Nidhal Kahlaoui1, Sylvain Cardinaud3,4, Thibaut Naninck1, Benoit Delache1, Mathieu Surenaud3,4, Mathilde Galhaut1, Nathalie Dereuddre-Bosquet1, Mariangela Cavarelli1, Pauline Maisonnasse1, Mireille Centlivre3,4, Christine Lacabaratz3,4, Aurelie Wiedemann3,4, Sandra Zurawski5, Gerard Zurawski5, Olivier Schwartz3,6,7, Rogier W Sanders8, Roger Le Grand1, Yves Levy3,4,9, Rodolphe Thiébaut2,3,10.   

Abstract

The definition of correlates of protection is critical for the development of next-generation SARS-CoV-2 vaccine platforms. Here, we propose a model-based approach for identifying mechanistic correlates of protection based on mathematical modelling of viral dynamics and data mining of immunological markers. The application to three different studies in non-human primates evaluating SARS-CoV-2 vaccines based on CD40-targeting, two-component spike nanoparticle and mRNA 1273 identifies and quantifies two main mechanisms that are a decrease of rate of cell infection and an increase in clearance of infected cells. Inhibition of RBD binding to ACE2 appears to be a robust mechanistic correlate of protection across the three vaccine platforms although not capturing the whole biological vaccine effect. The model shows that RBD/ACE2 binding inhibition represents a strong mechanism of protection which required significant reduction in blocking potency to effectively compromise the control of viral replication.
© 2022, Alexandre et al.

Entities:  

Keywords:  SARS-CoV-2; correlate of protection; immunology; inflammation; neutralization; rhesus macaque; vaccines; viruses

Mesh:

Substances:

Year:  2022        PMID: 35801637      PMCID: PMC9282856          DOI: 10.7554/eLife.75427

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.713


  72 in total

1.  ON IDENTIFIABILITY OF NONLINEAR ODE MODELS AND APPLICATIONS IN VIRAL DYNAMICS.

Authors:  Hongyu Miao; Xiaohua Xia; Alan S Perelson; Hulin Wu
Journal:  SIAM Rev Soc Ind Appl Math       Date:  2011-01-01       Impact factor: 10.780

2.  Superiority in Rhesus Macaques of Targeting HIV-1 Env gp140 to CD40 versus LOX-1 in Combination with Replication-Competent NYVAC-KC for Induction of Env-Specific Antibody and T Cell Responses.

Authors:  Gerard Zurawski; Xiaoying Shen; Sandra Zurawski; Georgia D Tomaras; David C Montefiori; Mario Roederer; Guido Ferrari; Christine Lacabaratz; Peter Klucar; Zhiqing Wang; Kathryn E Foulds; Shing-Fen Kao; Xuesong Yu; Alicia Sato; Nicole L Yates; Celia LaBranche; Sherry Stanfield-Oakley; Karen Kibler; Bertram Jacobs; Andres Salazar; Steve Self; William Fulp; Raphael Gottardo; Lindsey Galmin; Deborah Weiss; Anthony Cristillo; Giuseppe Pantaleo; Yves Levy
Journal:  J Virol       Date:  2017-04-13       Impact factor: 5.103

3.  Development of a rhesus monkey lung geometry model and application to particle deposition in comparison to humans.

Authors:  Bahman Asgharian; Owen Price; Gene McClellan; Rick Corley; Daniel R Einstein; Richard E Jacob; Jack Harkema; Stephan A Carey; Edward Schelegle; Dallas Hyde; Julia S Kimbell; Frederick J Miller
Journal:  Inhal Toxicol       Date:  2012-11       Impact factor: 2.724

4.  Kinetics and correlates of the neutralizing antibody response to SARS-CoV-2 infection in humans.

Authors:  Kanika Vanshylla; Veronica Di Cristanziano; Franziska Kleipass; Felix Dewald; Philipp Schommers; Lutz Gieselmann; Henning Gruell; Maike Schlotz; Meryem S Ercanoglu; Ricarda Stumpf; Petra Mayer; Matthias Zehner; Eva Heger; Wibke Johannis; Carola Horn; Isabelle Suárez; Norma Jung; Susanne Salomon; Kirsten Alexandra Eberhardt; Birgit Gathof; Gerd Fätkenheuer; Nico Pfeifer; Ralf Eggeling; Max Augustin; Clara Lehmann; Florian Klein
Journal:  Cell Host Microbe       Date:  2021-05-03       Impact factor: 21.023

5.  How to Test Severe Acute Respiratory Syndrome Coronavirus 2 Vaccines Ethically Even After One Is Available.

Authors:  Nir Eyal; Marc Lipsitch
Journal:  Clin Infect Dis       Date:  2021-12-16       Impact factor: 9.079

6.  Evaluation of a novel multiplexed assay for determining IgG levels and functional activity to SARS-CoV-2.

Authors:  Marina Johnson; Helen R Wagstaffe; Kimberly C Gilmour; Annabelle Lea Mai; Joanna Lewis; Adam Hunt; Jake Sirr; Christopher Bengt; Louis Grandjean; David Goldblatt
Journal:  J Clin Virol       Date:  2020-08-02       Impact factor: 3.168

7.  Changes in SARS-CoV-2 Spike versus Nucleoprotein Antibody Responses Impact the Estimates of Infections in Population-Based Seroprevalence Studies.

Authors:  Craig Fenwick; Antony Croxatto; Alix T Coste; Florence Pojer; Cyril André; Céline Pellaton; Alex Farina; Jérémy Campos; David Hacker; Kelvin Lau; Berend-Jan Bosch; Semira Gonseth Nussle; Murielle Bochud; Valerie D'Acremont; Didier Trono; Gilbert Greub; Giuseppe Pantaleo
Journal:  J Virol       Date:  2021-01-13       Impact factor: 5.103

8.  A molecular cell atlas of the human lung from single-cell RNA sequencing.

Authors:  Kyle J Travaglini; Ahmad N Nabhan; Lolita Penland; Rahul Sinha; Astrid Gillich; Rene V Sit; Stephen Chang; Stephanie D Conley; Yasuo Mori; Jun Seita; Gerald J Berry; Joseph B Shrager; Ross J Metzger; Christin S Kuo; Norma Neff; Irving L Weissman; Stephen R Quake; Mark A Krasnow
Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

9.  Correlates of protection against symptomatic and asymptomatic SARS-CoV-2 infection.

Authors:  Teresa Lambe; Andrew J Pollard; Merryn Voysey; Shuo Feng; Daniel J Phillips; Thomas White; Homesh Sayal; Parvinder K Aley; Sagida Bibi; Christina Dold; Michelle Fuskova; Sarah C Gilbert; Ian Hirsch; Holly E Humphries; Brett Jepson; Elizabeth J Kelly; Emma Plested; Kathryn Shoemaker; Kelly M Thomas; Johan Vekemans; Tonya L Villafana
Journal:  Nat Med       Date:  2021-09-29       Impact factor: 53.440

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