Literature DB >> 35800960

Evolution of root nodule symbiosis: Focusing on the transcriptional regulation from the genomic point of view.

Kai Battenberg1, Makoto Hayashi1.   

Abstract

Since molecular phylogenetics recognized root nodule symbiosis (RNS) of all lineages as potentially homologous, scientists have tried to understand the "when" and the "how" of RNS evolution. Initial progress was made on understanding the timing of RNS evolution, facilitating our progress on understanding the underlying genomic changes leading to RNS. Here, we will first cover the different hypotheses on the timings of gains/losses of RNS and show how this has helped us understand how RNS has evolved. Finally, we will discuss how our improved understanding of the genetic changes that led to RNS is now helping us refine our understanding on when RNS has evolved.
© 2022 Japanese Society for Plant Biotechnology.

Entities:  

Keywords:  evolution; homology; predisposition of nodulation; root nodule symbiosis

Year:  2022        PMID: 35800960      PMCID: PMC9200091          DOI: 10.5511/plantbiotechnology.22.0127a

Source DB:  PubMed          Journal:  Plant Biotechnol (Tokyo)        ISSN: 1342-4580            Impact factor:   1.308


  30 in total

1.  Expression of early nodulin genes in alfalfa mycorrhizae indicates that signal transduction pathways used in forming arbuscular mycorrhizae and Rhizobium-induced nodules may be conserved.

Authors:  P van Rhijn; Y Fang; S Galili; O Shaul; N Atzmon; S Wininger; Y Eshed; M Lum; Y Li; V To; N Fujishige; Y Kapulnik; A M Hirsch
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

Review 2.  Phylogenetic perspectives on the origins of nodulation.

Authors:  Jeff J Doyle
Journal:  Mol Plant Microbe Interact       Date:  2011-11       Impact factor: 4.171

Review 3.  How close are we to nitrogen-fixing cereals?

Authors:  Myriam Charpentier; Giles Oldroyd
Journal:  Curr Opin Plant Biol       Date:  2010-10       Impact factor: 7.834

Review 4.  Deep homology and the origins of evolutionary novelty.

Authors:  Neil Shubin; Cliff Tabin; Sean Carroll
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

5.  A plant regulator controlling development of symbiotic root nodules.

Authors:  L Schauser; A Roussis; J Stiller; J Stougaard
Journal:  Nature       Date:  1999-11-11       Impact factor: 49.962

6.  The Casuarina NIN gene is transcriptionally activated throughout Frankia root infection as well as in response to bacterial diffusible signals.

Authors:  Fernando Clavijo; Issa Diedhiou; Virginie Vaissayre; Laurent Brottier; Jennifer Acolatse; Daniel Moukouanga; Amandine Crabos; Florence Auguy; Claudine Franche; Hassen Gherbi; Antony Champion; Valerie Hocher; David Barker; Didier Bogusz; Louis S Tisa; Sergio Svistoonoff
Journal:  New Phytol       Date:  2015-06-11       Impact factor: 10.151

Review 7.  Cell and developmental biology of arbuscular mycorrhiza symbiosis.

Authors:  Caroline Gutjahr; Martin Parniske
Journal:  Annu Rev Cell Dev Biol       Date:  2013       Impact factor: 13.827

8.  A shared gene drives lateral root development and root nodule symbiosis pathways in Lotus.

Authors:  Takashi Soyano; Yoshikazu Shimoda; Masayoshi Kawaguchi; Makoto Hayashi
Journal:  Science       Date:  2019-11-22       Impact factor: 47.728

Review 9.  Evolution of NIN and NIN-like Genes in Relation to Nodule Symbiosis.

Authors:  Jieyu Liu; Ton Bisseling
Journal:  Genes (Basel)       Date:  2020-07-11       Impact factor: 4.096

10.  Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses.

Authors:  Robin van Velzen; Rens Holmer; Fengjiao Bu; Luuk Rutten; Arjan van Zeijl; Wei Liu; Luca Santuari; Qingqin Cao; Trupti Sharma; Defeng Shen; Yuda Roswanjaya; Titis A K Wardhani; Maryam Seifi Kalhor; Joelle Jansen; Johan van den Hoogen; Berivan Güngör; Marijke Hartog; Jan Hontelez; Jan Verver; Wei-Cai Yang; Elio Schijlen; Rimi Repin; Menno Schilthuizen; M Eric Schranz; Renze Heidstra; Kana Miyata; Elena Fedorova; Wouter Kohlen; Ton Bisseling; Sandra Smit; Rene Geurts
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-01       Impact factor: 11.205

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