| Literature DB >> 35800145 |
Asmaa Mohammed1, Olfat G Shaker2, Mahmoud A F Khalil3, Yumn A Elsabagh4, Mohammed Gomaa5, Azza M Ahmed6, Randa Erfan2.
Abstract
Behçet's disease (BD) is a chronic inflammatory disease. Immunological defects have been shown to play a significant role in the progression of BD. The serum levels of two long non-coding RNAs (lncRNAs), NEAT1 and MALAT1, were examined in patients with BD to identify their role in the disease pathogenesis. Both lncRNAs were mentioned as essential regulators of innate immune responses and have a crucial role in inflammatory diseases. Fifty patients with BD and a similar number of control individuals were involved in our study. At enrollment, data was collected from patients and controls, and the disease severity in active cases was determined using the Behçet's Disease Current Activity Form (BDCAF). Levels of the two studied biomarkers in the serum, NEAT1 and MALAT1, were investigated by quantitative RT-PCR (qRT-PCR). NEAT1 levels were significantly turned down in BD patients (fold changes = 0.77, p = 0.0001) and correlated negatively with the BDCAF (r = -0.41; p = 0.003). On the other hand, the MALAT1 levels were significantly up-regulated in BD patients (fold changes = 2.65, p = 0.003). Serum levels of NEAT1 were significantly decreased in patients with active states than in stationary cases (0.387 versus 1.99, respectively; p = 0.01) and compared with controls (p = 0.001). Also, NEAT1 levels were significantly increased in patients with stationary states compared to controls (p = 0.03). There was a positive association between NEAT1 and MALAT1 levels among BD patients (r = 0.29, p = 0.04). Our findings demonstrate a possible role of NEAT1 and MALAT1 in the pathogenesis of BD.Entities:
Keywords: Behçet's disease; Long non-coding RNAs; MALAT1; NEAT1
Year: 2022 PMID: 35800145 PMCID: PMC9253411 DOI: 10.1016/j.sjbs.2022.103344
Source DB: PubMed Journal: Saudi J Biol Sci ISSN: 2213-7106 Impact factor: 4.052
Demographic and clinical characters of the studied groups.
| Variables | BD Group | Control Group | P-value |
|---|---|---|---|
| 34.3 ± 8.7 | 33.6 ± 9.5 | 0.7 | |
| 41 (82%) | 36 (80%) | 0.9 | |
| Oral Ulcers | 24 (48%) | – | – |
| Genital Ulcers | 11 (22%) | – | – |
| Cutaneous Lesions | 17 (34%) | – | – |
| Uveitis, No. (%) | 13 (26%) | – | – |
| Neurological affection, No. (%) | 6 (12%) | – | – |
| Azathioprine | 15 (30%) | – | – |
| Steroids | 31 (62%) | – | – |
| Colchicine | 36 (72%) | – | – |
| 38 (76%) | – | – | |
| 2.3 ± 1.3 | – | – | |
BDCAF = Behçet's disease Current Activity Form.
SD = standard deviation.
Comparisons of NEAT1, and MALAT1 levels in different study groups. Table illustrates that there is statistically significant low mean of NEAT1 levels, and high mean of MALAT1 levels with p-value < 0.05 among cases.
| Variables | Cases (n = 50) | Control (n = 45) | p-value | ||
|---|---|---|---|---|---|
| Mean | SD | Mean | SD | ||
| 1.5 | 1.03 | 0.23 | |||
| 8.9 | 1.03 | 0.23 | |||
Comparisons of NEAT1, and MALAT1 levels in different disease activity among cases. Table illustrates that there is statistically significant low mean of NEAT1, with p-value < 0.05 in active cases than stationary, and low mean among active and stationary in comparison to control. On the other hand there is no statistically significant difference with p-value > 0.05 as regards MALAT1 level between active, stationary cases and controls.
| Variables | Active (n = 38) | Stationary (n = 12) | Control (n = 45) | p-value | |||
|---|---|---|---|---|---|---|---|
| Mean | SD | MEAN | SD | Mean | SD | ||
| 0.32 | 1.99 | 2.9 | 0.93 | 0.13 | |||
| 9.7 | 3.22 | 5.3 | 0.95 | 0.14 | 0.4 | ||
a: statistical significance difference between active and stationary.
b: statistical significance difference between active and controls.
c: statistical significance difference between stationary and controls.
Fig. 1Dot plots for relative expression levels of NEAT1 in Cases and Healthy Controls.
Fig. 2Dot plots for relative expression levels of NEAT1 in the patients with active state versus the patients with stationary state.
Fig. 3Correlation between expression levels of NEAT1 and BDCAF of the patients.
Fig. 4Dot plots for relative expression levels of MALAT1 in Cases and Healthy Controls.
Fig. 5Dot plots for relative expression levels of MALAT1 in the active and stationary cases.
Comparisons of NEAT1, and MALAT1 relative expression levels in different disease phenotypes. Table illustrates that there was no statistically significant difference with p-value > 0.05 in NEAT1 and MALAT levels in different disease phenotypes, and in different types of treatment.
| Variables | NEAT1 | MALAT1 | |||||
|---|---|---|---|---|---|---|---|
| Mean | SD | p-value | Mean | SD | p-value | ||
| 0.899 | 1.8 | 0.6 | 1.76 | 3.3 | 0.4 | ||
| 0.41 | 0.32 | 5.2 | 16.7 | ||||
| 0.36 | 0.32 | 0.07 | 0.96 | 1.4 | 0.2 | ||
| 1.15 | 2.1 | 4.2 | 12.1 | ||||
| 0.42 | 0.35 | 0.4 | 1.72 | 1.7 | 0.7 | ||
| 0.87 | 1.8 | 2.9 | 9.9 | ||||
| 0.35 | 0.29 | 0.2 | 0.81 | 1.3 | 0.3 | ||
| 0.99 | 1.9 | 3.6 | 10.8 | ||||
| 0.80 | 1.7 | 0.7 | 2.91 | 9.4 | 0.6 | ||
| 0.56 | 0.24 | 0.68 | 1.1 | ||||
| Yes | 0.91 | 1.9 | 0.7 | 3.53 | 11.2 | 0.8 | |
| No | 0.55 | 0.76 | 1.21 | 1.4 | |||
| Yes | 1.12 | 2.2 | 0.08 | 6.1 | 15.7 | 0.1 | |
| No | 0.62 | 1.2 | 1.2 | 1.9 | |||
| Yes | 0.83 | 1.8 | 0.9 | 1.69 | 3.3 | 0.9 | |
| No | 0.63 | 0.87 | 5.1 | 16 | |||
Sensitivity and specificity of NEAT1 and MALAT1 in the diagnosis of BD patients. Table illustrated that NEAT1 is more sensitive than MALAT1 in the diagnosis of BD cases with sensitivity (76%) and specificity (100%) at cut off (0.786) (AUC = 88.4%, 95% CI: 80.9–95.5) versus 60% and 100% respectively for MALAT1 at cut off (0.744) (AUC = 67.1%, 95% CI: 54.7–79.4).
| Variable | Sensitivity | Specificity | AUC | Cut off point | 95% CI |
|---|---|---|---|---|---|
AUC = area under curve.
CI = confidence interval.
Fig. 6ROC curve for detecting the predictive power of NEAT1 and MALAT1 in BD diagnosis.