Literature DB >> 35797594

Genetic Association Between Epigenetic Aging-Acceleration and the Progression of Mild Cognitive Impairment to Alzheimer's Disease.

Hongliang Liu1,2, Michael Lutz3, Sheng Luo4.   

Abstract

Alzheimer's disease (AD) is a progressive neurodegenerative disorder, and previous studies have shown its association with accelerated aging. In this study, we hypothesized that single nucleotide polymorphisms (SNPs) that contributed to aging acceleration are also associated with the progression from mild cognitive impairment (MCI) to AD. By applying genetic correlation analysis and single-locus survival analysis, we investigated the associations between intrinsic- and extrinsic-epigenetic-age-acceleration (IEAA and EEAA) related SNPs and the progression time from MCI to AD dementia using the data of 767 MCI participants from the Alzheimer's Disease Neuroimaging Initiative (ADNI) study and 1 373 MCI patients from the National Alzheimer's Coordinating Center (NACC) study. Genetic correlations were found between IEAA/EEAA and AD (positive for IEAA-AD and negative for EEAA-AD). We revealed that 70 IEAA and 81 EEAA SNPs had associations with the progression time from MCI to AD with Bayesian false-discovery probability ≤ 0.8 in the ADNI study, with 22 IEAA SNPs and 16 EEAA SNPs being replicated in the NACC study (p < .05). Polygenic risk score (PRS) analysis showed that EEAA PRS but not IEAA PRS was associated with AD progression and the trend of decreasing fusiform gyrus volume in 2 data sets. Risk models incorporating both EAA PRSs did not show any significant improvement in predictive accuracy. Our results revealed multiple genetic variants with pleiotropic effects on both EAA and AD, which suggested shared genetic architecture between epigenetic age acceleration and AD progression.
© The Author(s) 2022. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Alzheimer’s disease; Epigenetic aging; Mild cognitive impairment; Polygenic risk score; Survival analysis

Mesh:

Year:  2022        PMID: 35797594      PMCID: PMC9434458          DOI: 10.1093/gerona/glac138

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.591


  59 in total

Review 1.  Ageing and the brain.

Authors:  R Peters
Journal:  Postgrad Med J       Date:  2006-02       Impact factor: 2.401

2.  Longitudinal changes of telomere length and epigenetic age related to traumatic stress and post-traumatic stress disorder.

Authors:  Marco P Boks; Hans C van Mierlo; Bart P F Rutten; Timothy R D J Radstake; Lot De Witte; Elbert Geuze; Steve Horvath; Leonard C Schalkwyk; Christiaan H Vinkers; Jasper C A Broen; Eric Vermetten
Journal:  Psychoneuroendocrinology       Date:  2014-07-23       Impact factor: 4.905

Review 3.  Families of retinoid dehydrogenases regulating vitamin A function: production of visual pigment and retinoic acid.

Authors:  G Duester
Journal:  Eur J Biochem       Date:  2000-07

4.  Genome-wide methylation profiles reveal quantitative views of human aging rates.

Authors:  Gregory Hannum; Justin Guinney; Ling Zhao; Li Zhang; Guy Hughes; SriniVas Sadda; Brandy Klotzle; Marina Bibikova; Jian-Bing Fan; Yuan Gao; Rob Deconde; Menzies Chen; Indika Rajapakse; Stephen Friend; Trey Ideker; Kang Zhang
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

5.  Investigating the relationship between DNA methylation age acceleration and risk factors for Alzheimer's disease.

Authors:  Daniel L McCartney; Anna J Stevenson; Rosie M Walker; Jude Gibson; Stewart W Morris; Archie Campbell; Alison D Murray; Heather C Whalley; David J Porteous; Andrew M McIntosh; Kathryn L Evans; Ian J Deary; Riccardo E Marioni
Journal:  Alzheimers Dement (Amst)       Date:  2018-06-21

6.  LRRTM4 and PCSK5 Genetic Polymorphisms as Markers for Cognitive Impairment in A Hypotensive Aging Population: A Genome-Wide Association Study in Taiwan.

Authors:  Yi-Chun Chen; Yu-Li Liu; Shih-Jen Tsai; Po-Hsiu Kuo; Shih-Sin Huang; Yun-Shien Lee
Journal:  J Clin Med       Date:  2019-07-29       Impact factor: 4.241

7.  Integrative annotation of chromatin elements from ENCODE data.

Authors:  Michael M Hoffman; Jason Ernst; Steven P Wilder; Anshul Kundaje; Robert S Harris; Max Libbrecht; Belinda Giardine; Paul M Ellenbogen; Jeffrey A Bilmes; Ewan Birney; Ross C Hardison; Ian Dunham; Manolis Kellis; William Stafford Noble
Journal:  Nucleic Acids Res       Date:  2012-12-05       Impact factor: 16.971

Review 8.  Aging and Alzheimer's disease: Comparison and associations from molecular to system level.

Authors:  Xian Xia; Quanlong Jiang; Joseph McDermott; Jing-Dong J Han
Journal:  Aging Cell       Date:  2018-07-02       Impact factor: 9.304

Review 9.  Epigenetics: Recent Advances and Its Role in the Treatment of Alzheimer's Disease.

Authors:  Xuewen Xiao; Xixi Liu; Bin Jiao
Journal:  Front Neurol       Date:  2020-10-15       Impact factor: 4.003

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