Literature DB >> 35784398

Discovering Geometry in Data Arrays.

Eric C Chi1.   

Abstract

Modern technologies produce a deluge of complicated data. In neuroscience, for example, minimally invasive experimental methods can take recordings of large populations of neurons at high resolution under a multitude of conditions. Such data arrays possess non-trivial interdependencies along each of their axes. Insights into these data arrays may lay the foundations of advanced treatments for nervous system disorders. The potential impacts of such data, however, will not be fully realized unless the techniques for analyzing them keep pace. Specifically, there is an urgent, growing need for methods for estimating the low-dimensional structure and geometry in big and noisy data arrays. This article reviews a framework for identifying complicated underlying patterns in such data and also recounts the key role that the Department of Energy Computational Sciences Graduate Fellowship played in setting the stage for this work to be done by the author.

Entities:  

Year:  2021        PMID: 35784398      PMCID: PMC9248489          DOI: 10.1109/mcse.2021.3120039

Source DB:  PubMed          Journal:  Comput Sci Eng        ISSN: 1521-9615            Impact factor:   2.152


  6 in total

1.  Convex biclustering.

Authors:  Eric C Chi; Genevera I Allen; Richard G Baraniuk
Journal:  Biometrics       Date:  2016-05-10       Impact factor: 2.571

2.  Splitting Methods for Convex Clustering.

Authors:  Eric C Chi; Kenneth Lange
Journal:  J Comput Graph Stat       Date:  2015-12-10       Impact factor: 2.302

3.  Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses.

Authors:  A Bhattacharjee; W G Richards; J Staunton; C Li; S Monti; P Vasa; C Ladd; J Beheshti; R Bueno; M Gillette; M Loda; G Weber; E J Mark; E S Lander; W Wong; B E Johnson; T R Golub; D J Sugarbaker; M Meyerson
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

4.  mRNA-Seq whole-transcriptome analysis of a single cell.

Authors:  Fuchou Tang; Catalin Barbacioru; Yangzhou Wang; Ellen Nordman; Clarence Lee; Nanlan Xu; Xiaohui Wang; John Bodeau; Brian B Tuch; Asim Siddiqui; Kaiqin Lao; M Azim Surani
Journal:  Nat Methods       Date:  2009-04-06       Impact factor: 28.547

Review 5.  Corticostriatal connectivity and its role in disease.

Authors:  Gordon M G Shepherd
Journal:  Nat Rev Neurosci       Date:  2013-04       Impact factor: 34.870

6.  Provable Convex Co-clustering of Tensors.

Authors:  Eric C Chi; Brian R Gaines; Will Wei Sun; Hua Zhou; Jian Yang
Journal:  J Mach Learn Res       Date:  2020       Impact factor: 5.177

  6 in total

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