| Literature DB >> 35784059 |
Danielle L Edwards1, Luciano J Avila2, Lorena Martinez2,3, Jack W Sites4,5, Mariana Morando2.
Abstract
Evolutionary correlations between phenotypic and environmental traits characterize adaptive radiations. However, the lizard genus Liolaemus, one of the most ecologically diverse terrestrial vertebrate radiations on earth, has so far shown limited or mixed evidence of adaptive diversification in phenotype. Restricted use of comprehensive environmental data, incomplete taxonomic representation and not considering phylogenetic uncertainty may have led to contradictory evidence. We compiled a 26-taxon dataset for the Liolaemus gracilis species group, representing much of the ecological diversity represented within Liolaemus and used environmental data to characterize how environments occupied by species' relate to phenotypic evolution. Our analyses, explicitly accounting for phylogenetic uncertainty, suggest diversification in phenotypic traits toward the present, with body shape evolution rapidly evolving in this group. Body shape evolution correlates with the occupation of different structural habitats indicated by vegetation axes suggesting species have adapted for maximal locomotory performance in these habitats. Our results also imply that the effects of phylogenetic uncertainty and model misspecification may be more extensive on univariate, relative to multivariate analyses of evolutionary correlations, which is an important consideration in analyzing data from rapidly radiating adaptive radiations.Entities:
Keywords: Liolaemus gracilis species complex; ecomorphology; environmental variation; morphological evolution; phylogenetic comparative methods
Year: 2022 PMID: 35784059 PMCID: PMC9201750 DOI: 10.1002/ece3.9009
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 3.167
FIGURE 1Distribution map of the L. gracilis species complex shown overlain over a digital elevation model of Patagonia, position relative to South America is shown inset. Different species are indicated by the various colored and shaped symbols as outlined in the inset key
FIGURE 2Median time‐calibrated species tree showing the evolutionary relationships among species within the Liolaemus gracilis species complex, including a predominantly southern and northern clade. The 95% confidence intervals on divergence dates are shown in the gray node bars, and as the text above the major nodes for the northern, southern, and the most recent common ancestor of the group. A time axis is also displayed below the tree. Numbers around nodes represent the posterior probabilities for species tree support for each node
FIGURE 3Disparity‐through‐time plots for body size (a), body shape (b), elevation (c), vegetation (d), precipitation (e), and temperature (f) in the Liolaemus gracilis species complex. Time (mya) is on the x‐axis, and average subclade disparity (MDI) is on the y‐axis. Gray shading indicates a null Brownian motion model of trait evolution, the yellow dotted line traces the mean of this null model. The red lines indicate 1000 random replicate trees from the posterior distribution of species trees, accounting for uncertainty in phylogenetic relationships, and timing of divergence. The mean across all these trees is shown (aqua dotted line) relative to the median species tree (black line; Figure 2). Average MDI across all 1000 posterior trees is listed in the text on the figure for each trait type
Results comparing Brownian Motion (BM), Ornstein–Uhlenbeck (OU), or Early Burst (EB) models of trait evolution
| Dataset | Model | Model weight | AICc | ∆AICc | Parameters |
|---|---|---|---|---|---|
| Body shape | BM |
0.04 (<0.01–1.0) | −704.01 ± 85.18 | 0–193.26 | ‐ |
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| EB |
<0.01 (<0.01 ‐ <0.01) | −684.93 ± 83.90 | 22.02–211.78 | β = −0.13 ± 0.15 | |
| Body size | BM |
<0.01 (<0.01 ‐ <0.01) | −42.71 ± 9.16 | 10.13–27.03 | ‐ |
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| EB |
<0.01 (<0.01 ‐ <0.01) | −40.15 ± 9.19 | 12.48–29.60 | β = −1.40e‐19 ± 9.04e‐18 | |
| Precipitation | BM |
<0.01 (<0.01 ‐ <0.01) | 366.39 ± 75.66 | 28.46–177.30 | ‐ |
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| EB |
<0.01 (<0.01 ‐ <0.01) | 369.02 ± 75.66 | 31.10–179.94 | β = 0 ± 0 | |
| Temperature | BM |
<0.01 (<0.01–0.03) | 462.13 ± 80.45 | 6.89–166.03 | ‐ |
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| EB |
<0.01 (<0.01 ‐ <0.01) | 464.87 ± 80.45 | 9.62–168.76 | β = 0 ± 0 | |
| Vegetation | BM |
<0.01 (<0.01 ‐ <0.01) | 290.50 ± 72.56 | 31.06–164.38 | ‐ |
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| EB |
<0.01 (<0.01 ‐ <0.01) | 293.14 ± 72.56 | 33.70–167.02 | β = −3.19e‐12 ± 2.07e‐10 | |
| Elevation |
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| OU |
0.18 (0.18–0.18) | 107.83 ± 2.47e‐8 | 2.57–2.57 | ⍺ = 0.66 ± 0.09 | |
| EB |
0.18 (0.18–0.18) | 107.90 ± 1.26 | 2.57–2.57 | β = −1.72 ± 1.14 |
Note: Model fit was assessed using AICc calculated from across 1000 posterior trees. Shown are the mean and 95% confidence intervals on model weight (brackets), the mean ± standard deviation of AICc, the 95% confidence intervals on 𝚫 AICc, and the mean ± standard deviation of the ⍺ and β parameters for the OU and EB models, respectively.
Results of tests for significant differences among northern and southern L. gracilis lineages, iterated across 1000 trees from the posterior distribution
| Dataset | Test statistic |
|
|---|---|---|
| Body shape |
0.96 ± 0.03 ( |
0.95 ± 0.08 ( |
| Body size# |
0.01 ± 0.01 ( |
0.93 ± 0.02 ( |
| Precipitation |
0.84 ± 0.26 ( |
0.33 ± 0.41 ( |
| Temperature |
0.76 ± 0.34 ( |
0.27 ± 0.37 ( |
| Vegetation |
( |
( |
| Elevation# |
0.13 ± 0.09 ( |
0.72 ± 0.11 ( |
Note: Shown is the mean ± standard deviation test statistic (italics = 95% confidence intervals) for the multivariate phylogenetic MANOVA or univariate (#) phylogenetic ANOVA as appropriate. The mean ± standard deviation of the p‐value is also shown, with the 95% confidence intervals in italics. Analyses were undertaken using the best‐fit model of trait evolution (Table 1).
Results of tests for evolutionary correlations between environmental (vegetation, precipitation, temperature, and elevation) and phenotypic (body shape and body size) traits. The results for each axis of variation in vegetation, temperature, and precipitation with respect to dependent multivariate body shape and univariate body size are shown separately
| Phenotypic data | Environmental data | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Vegetation | Temperature | Precipitation | Elevation | ||||||||
| Av. NDVI | Tree Cover | Av. NDVI | Max Temp. | Wet Temp. | Diur. Range | Isotherm. | Ann. Prec. | Dry Prec. | Warm Prec | ||
| Seas. NDVI | Seas. NDVI | Warm Temp. | Cold Temp. | Ann. Range | Min. Temp. | Wet Prec. | Cold Prec | ||||
| 56.43% | 37.26% | 6.31% | 49.03% | 27.64% | 18.22% | 4.37% | 47.68% | 44.28% | 7.19% | ||
| Body shape |
|
0.13 (0.13–0.13) |
0.07 (0.07–0.08) |
0.21 (0.21–0.21) |
0.18 (0.18–0.18) |
0.28 (0.25–0.32) |
0.25 (0.25–0.25) |
0.32 (0.29–0.34) |
0.09 (0.07–0.10) |
0.13 (0.11–0.14) |
0.13 (0.13–0.13) |
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|
0.75 (0.75–0.76) 0% |
0.91 (0.91–0.91) 0.2% |
0.51 (0.51–0.51) 0% |
0.60 (0.60–0.60) 0% |
0.14 (0.14–0.14) 0% |
0.37 (0.37–0.37) 0% |
0.19 (0.15–0.23) 0% |
0.89 (0.84–0.92) 0% |
0.76 (0.71–0.80) 0% |
0.69 (0.69–0.69) 0% |
| Body size |
7.38 (1.01–41.90) | 0.79 (0.07–4.46) | 1.35 (0.12–6.45) |
6.61 (0.01–34.39) |
8.29 (1.09–51.19) |
3.16 (0.46–9.37) |
0.61 (<0.01–2.58) |
4.28 (0.03–22.29) |
0.85 (0.13–1.83) |
1.29 (0.03–7.47) |
3.45 (0.004–19.84) |
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0.09 (<0.001–0.33) 24.5% |
0.55 (0.05–0.79) 2.6% |
0.46 (0.02–0.74) 5.4% |
0.34 (<0.001–0.92) 8.8% |
0.07 (<0.001–0.31) 42.41% |
0.17 (0.006–0.50) 17.7% |
0.59 (0.12–0.97) 1.6% |
0.24 (<0.001–0.87) 8.5% |
0.43 (0.19–0.72) 0.5% |
0.49 (0.01–0.86) 5.7% |
0.48 (<0.001–0.95) 8.7% |
Note: We provide the mean (large type) and 95% confidence intervals (brackets) for the test statistic, and mean and 95% confidence intervals (brackets) for slope significance p‐values. Parameter estimates are taken from 1000 randomly drawn trees from the posterior distribution. Trait correlations that are significant are bolded. p‐value .01 **. The proportions of variance described by multivariate axes (i.e., vegetation, temperature, and precipitation) are shown (large type proportions) along with the main loaded variables on those axes (see Table S4).