Literature DB >> 35783537

Measuring Mouse Somatosensory Reflexive Behaviors with High-speed Videography, Statistical Modeling, and Machine Learning.

Ishmail Abdus-Saboor1, Wenqin Luo2.   

Abstract

Objectively measuring and interpreting an animal's sensory experience remains a challenging task. This is particularly true when using preclinical rodent models to study pain mechanisms and screen for potential new pain treatment reagents. How to determine their pain states in a precise and unbiased manner is a hurdle that the field will need to overcome. Here, we describe our efforts to measure mouse somatosensory reflexive behaviors with greatly improved precision by high-speed video imaging. We describe how coupling sub-second ethograms of reflexive behaviors with a statistical reduction method and supervised machine learning can be used to create a more objective quantitative mouse "pain scale." Our goal is to provide the readers with a protocol of how to integrate some of the new tools described here with currently used mechanical somatosensory assays, while discussing the advantages and limitations of this new approach.

Entities:  

Keywords:  Pain; high-speed videography; machine learning; principle component analysis; reflexive behaviors; somatosensation; touch

Year:  2022        PMID: 35783537      PMCID: PMC9249079          DOI: 10.1007/978-1-0716-2039-7_21

Source DB:  PubMed          Journal:  Neuromethods        ISSN: 0893-2336


  111 in total

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Authors:  Eric L Rohrs; Heidi E Kloefkorn; Emily H Lakes; Brittany Y Jacobs; John K Neubert; Robert M Caudle; Kyle D Allen
Journal:  J Neurosci Methods       Date:  2015-03-28       Impact factor: 2.390

2.  Conduction of the effects of noxious stimulation by short-fiber multisynaptic systems of the spinal cord in the rat.

Authors:  A I Basbaum
Journal:  Exp Neurol       Date:  1973-09       Impact factor: 5.330

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Authors:  Alice Arcourt; Louise Gorham; Rahul Dhandapani; Vincenzo Prato; Francisco J Taberner; Hagen Wende; Vijayan Gangadharan; Carmen Birchmeier; Paul A Heppenstall; Stefan G Lechner
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4.  Nociceptive withdrawal reflexes evoked by uniform-temperature laser heat stimulation of large skin areas in humans.

Authors:  Carsten Dahl Mørch; Ole Kaeseler Andersen; Thomas Graven-Nielsen; Lars Arendt-Nielsen
Journal:  J Neurosci Methods       Date:  2006-09-22       Impact factor: 2.390

Review 5.  Predictive validity of behavioural animal models for chronic pain.

Authors:  Odd-Geir Berge
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Authors:  Daniel J Cavanaugh; Alexander T Chesler; Alexander C Jackson; Yaron M Sigal; Hiroki Yamanaka; Rebecca Grant; Dajan O'Donnell; Roger A Nicoll; Nirao M Shah; David Julius; Allan I Basbaum
Journal:  J Neurosci       Date:  2011-03-30       Impact factor: 6.167

7.  An experimental model for peripheral neuropathy produced by segmental spinal nerve ligation in the rat.

Authors:  Sun Ho Kim; Jin Mo Chung
Journal:  Pain       Date:  1992-09       Impact factor: 6.961

Review 8.  Machine learning and its applications to biology.

Authors:  Adi L Tarca; Vincent J Carey; Xue-wen Chen; Roberto Romero; Sorin Drăghici
Journal:  PLoS Comput Biol       Date:  2007-06       Impact factor: 4.475

9.  Characterization of mouse orofacial pain and the effects of lesioning TRPV1-expressing neurons on operant behavior.

Authors:  John K Neubert; Christopher King; Wendi Malphurs; Fong Wong; James P Weaver; Alan C Jenkins; Heather L Rossi; Robert M Caudle
Journal:  Mol Pain       Date:  2008-10-01       Impact factor: 3.395

Review 10.  Nociception and pain: lessons from optogenetics.

Authors:  Fiona B Carr; Venetia Zachariou
Journal:  Front Behav Neurosci       Date:  2014-03-25       Impact factor: 3.558

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