| Literature DB >> 35782688 |
Yomna M El-Meligui1, Naglaa M Hassan1, Amira B Kassem2, Nora A Gouda3, Marwa Mohanad4, Manal A Hamouda5, Ahmad Salahuddin6.
Abstract
Introduction: Acute myeloid leukemia (AML) is the most common type of leukemia among adults and is characterized by various genetic abnormalities. HOXB4 and PRDM16 are promising markers of AML. Our objective is to assess the potential roles of HOXB4 and PRDM16 as prognostic and predictive markers in newly diagnosed AML patients and determine the correlation between their expressions and other prognostic markers as FLT3-ITD, NPM1 exon 12 mutations, response to treatment, and patient's survival.Entities:
Keywords: AML; FLT3-ITD; HOXB4; NPM1 exon 12; PRDM16
Year: 2022 PMID: 35782688 PMCID: PMC9241994 DOI: 10.2147/PGPM.S368640
Source DB: PubMed Journal: Pharmgenomics Pers Med ISSN: 1178-7066
Demographic Data of All Studied Patients
| Variables | N= 83 | % | |
|---|---|---|---|
| Age: (years)* | 40.0 (18–57) | ||
| Gender | Male | 46 | 55.4 |
| Female | 37 | 44.6 | |
| TLC x109 /mm3* | 30.0 (0.5–616.0) | ||
| Hb (gm/dl) * | 7.7 (3.7–13.2) | ||
| Platelets x109 /mm3* | 36.0 (5.0–826.0) | ||
| Peripheral blood blasts %* | 42.0 (0.0–96.0) | ||
| BM blasts %* | 60.0 (20.0–97.0) | ||
| BM cellularity | Normocellular | 17 | 20.5 |
| Hypercellular | 62 | 74.7 | |
| Hypocellular | 4 | 4.8 | |
| FAB | M0 | 2 | 2.4 |
| M1 | 12 | 14.5 | |
| M2 | 33 | 39.8 | |
| M3 | 2 | 2.4 | |
| M4 | 25 | 30.1 | |
| M5 | 6 | 7.2 | |
| M7 | 3 | 3.6 | |
| IPT | Myeloid | 49 | 59.0 |
| Monocytic | 6 | 7.2 | |
| Myelomonocytic | 25 | 30.1 | |
| Megakaryoblastic | 3 | 3.6 | |
| Genetic risk | Low | 31 | 37.3 |
| Intermediate | 36 | 43.4 | |
| High | 16 | 19.3 | |
| Wild | 77 | 92.8 | |
| Mutant | 6 | 7.2 | |
| Wild | 29 | 80.6 | |
| Mutant | 7 | 19.4 | |
Note: *Median (Min-Max).
Figure 1The mean fold change of HOXB4 (A) and PRDM16 (B) gene expressions.
Expression of HOXB4 and PRDM16
| Variables | AML | ||
|---|---|---|---|
| N=83 | % | ||
| Low Expression | 26 | 31.3 | |
| High Expression | 57 | 68.7 | |
| Low Expression | 55 | 66.2 | |
| High Expression | 28 | 33.8 | |
Relation Between HOXB4 and All Other Variables
| Variables | Test | P-value | |||||
|---|---|---|---|---|---|---|---|
| Low Expression | High Expression | ||||||
| N | % | N | % | ||||
| Age: (years)* | 38.50 (18–56) | 40.00 (18–57) | −0.692 | NS | |||
| TLC x109 /mm3* | 25.00 (1.3–358) | 40.00 (0.50–616) | −1.164 | NS | |||
| Hb (gm/dl)* | 8.00 (4.0–12.0) | 7.60 (3.7–13.2) | −0.692 | NS | |||
| Platelets x109 /mm3* | 33.50 (10.0–225.0) | 36.00 (5.0–826.0) | −0.191 | NS | |||
| Peripheral blood blasts %* | 38.50 (10.0–85.0) | 47.00 (0.0–96.0) | −0.285 | NS | |||
| BM blasts %* | 49.50 (25.0–97.0) | 63.00 (20–0–96.0) | −1.287 | NS | |||
| Sex | Male | 10 | 21.7 | 36 | 78.3 | 4.408 | 0.036 |
| Female | 16 | 43.2 | 21 | 56.8 | |||
| BM cellularity | Normocellular | 6 | 35.3 | 11 | 64.7 | 1.974 | NS |
| Hypercellular | 20 | 32.3 | 42 | 67.7 | |||
| Hypocellular | 0 | 0.0 | 4 | 100.0 | |||
| FAB | M0 | 0 | 0.0 | 2 | 100.0 | 9.405 | NS |
| M1 | 3 | 25.0 | 9 | 75.0 | |||
| M2 | 13 | 39.4 | 20 | 60.6 | |||
| M3 | 2 | 100.0 | 0 | 0.0 | |||
| M4 | 4 | 16.0 | 21 | 84.0 | |||
| M5 | 3 | 50.0 | 3 | 50.0 | |||
| M7 | 1 | 33.3 | 2 | 66.7 | |||
| IPT | Myeloid | 18 | 36.7 | 31 | 63.3 | 4.479 | NS |
| Monocytic | 3 | 50.0 | 3 | 50.0 | |||
| Myelomonocytic | 4 | 16.0 | 21 | 84.0 | |||
| Megakaryoblastic | 1 | 33.3 | 2 | 66.7 | |||
| Genetic risk | LR | 13 | 41.9 | 18 | 58.1 | 4.268 | NS |
| IR | 7 | 19.4 | 29 | 80.6 | |||
| HR | 6 | 37.5 | 10 | 62.5 | |||
| Wild | 22 | 28.5 | 55 | 71.5 | 0.012 | NS | |
| Mutant | 4 | 66.7 | 2 | 33.3 | |||
| Wild | 7 | 24.1 | 22 | 75.2 | 2.419 | NS | |
| Mutant | 0 | 0.0 | 7 | 100.0 | |||
| CR | No | 10 | 30.3 | 23 | 69.7 | 1.850 | NS |
| Yes | 16 | 32.0 | 34 | 68.0 | |||
| Relapse | No | 13 | 31.0 | 29 | 69.0 | 0.132 | NS |
| Yes | 3 | 37.5 | 5 | 62.5 | |||
Note: *Median (Min-Max), NS: non-significant, p value set significant at ≤0.05, # significant difference between high expression and low expression groups.
Relation Between PRDM16 and All Other Variables
| Variables | Test | P-value | |||||
|---|---|---|---|---|---|---|---|
| Low Expression | High Expression | ||||||
| N | % | N | % | ||||
| Age: (years)* | 39.00 (18–56) | 45.50 (18–57) | −1.123 | NS | |||
| TLC x109 /mm3* | 30.00 (0.5–616.0) | 27.50 (1.90–242.0) | −0.356 | NS | |||
| Hb (gm/dl)* | 7.60 (3.8–13.2) | 7.90 (3.7–12.0) | −1.243 | NS | |||
| Platelets x109 /mm3* | 40.00 (5.0–283.0) | 29.00 (9.0–826.0) | −1.146 | NS | |||
| Peripheral blood blasts %* | 42.00 (0.0–96.0) | 43.50 (5.0–90.0) | −0.058 | NS | |||
| BM blasts %* | 57.00 (25.0–97.0) | 64.50 (20.0–88.0) | −0.092 | NS | |||
| Sex | Male | 27 | 58.7 | 19 | 41.3 | 2.645 | NS |
| Female | 28 | 75.7 | 9 | 24.3 | |||
| BM Cellularity | Normocellular | 15 | 88.2 | 2 | 11.8 | 10.771 | 0.002 |
| Hypercellular | 40 | 64.5 | 22 | 35.5 | |||
| Hypocellular | 0 | 0.0 | 4 | 100.0 | |||
| FAB | M0 | 1 | 50.0 | 1 | 50.0 | 8.276 | NS |
| M1 | 7 | 58.3 | 5 | 41.7 | |||
| M2 | 26 | 78.8 | 7 | 21.2 | |||
| M3 | 2 | 100.0 | 0 | 0.0 | |||
| M4 | 12 | 48.0 | 13 | 52.0 | |||
| M5 | 5 | 83.3 | 1 | 16.7 | |||
| M7 | 2 | 66.7 | 1 | 33.3 | |||
| IPT | Myeloid | 36 | 73.5 | 13 | 26.5 | 5.453 | NS |
| Monocytic | 5 | 83.3 | 1 | 16.7 | |||
| Myelomonocytic | 12 | 48.0 | 13 | 52.0 | |||
| Megakaryoblastic | 2 | 66.7 | 1 | 33.3 | |||
| Genetic risk | LR | 23 | 74.2 | 8 | 25.8 | 3.265 | NS |
| IR | 20 | 55.6 | 16 | 44.4 | |||
| HR | 12 | 75.0 | 4 | 25.0 | |||
| Wild | 53 | 68.8 | 24 | 31.2 | 0.000 | NS | |
| Mutant | 2 | 33.3 | 4 | 66.7 | |||
| Wild | 15 | 51.7 | 14 | 48.3 | 0.042 | NS | |
| Mutant | 5 | 71.4 | 2 | 28.6 | |||
| CR | No | 19 | 57.6 | 14 | 42.4 | 0.132 | NS |
| Yes | 36 | 72.0 | 14 | 28.0 | |||
| Relapse | No | 30 | 71.4 | 12 | 28.6 | 0.043 | NS |
| Yes | 6 | 75.0 | 2 | 25.0 | |||
Notes: *Median (Min-Max), p-value set significant at ≤0.05, # significant difference between high expression and low expression groups.
Abbreviation: NS, non-significant.
Relation Between HOXB4 and PRDM16 Expressions and Survivals
| Variables | OS | DFS | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| No=83 | No. of Events | Median Survival Time | 24-Month Survival Estimate | P-value | No=49 | No. of Events | Median Survival Time | 24-Month Survival Estimate | P-value | ||
| Low Expression | 26 | 41 | 2.401 | 0.200 | NS | 16 | 3 | NR | 0.606 | NS | |
| High Expression | 57 | 18 | 5.395 | 0.280 | 33 | 5 | 26.908 | 0.646 | |||
| Low Expression | 55 | 39 | 4.211 | 0.245 | NS | 36 | 6 | 26.91 | 0.660 | NS | |
| High Expression | 28 | 20 | 1.678 | 0.214 | 13 | 2 | NR | 0.700 | |||
Note: *NR (median not reached).
Figure 2(A and B) Kaplan–Meier curves with log-rank statistics describe OS according to PRDM16 and HOXB4 expression level. (C and D) Kaplan–Meier curves with log-rank statistics describe DFS according to PRDM16 and HOXB4 expression levels.