Literature DB >> 35781626

Isolation of a novel Lactiplantibacillus plantarum strain resistant to nitrite stress and its transcriptome analysis.

Chae Young Kwon1,2, Kyoung Jin Choi1,2, Dongeun Yong3,4, Ji-Eun Kim5,6,7, Sang Sun Yoon8,9,10,11.   

Abstract

Nitric oxide (NO) is a reactive nitrogen species (RNS) that plays a vital role in regulating inflammatory processes. Under abnormal conditions, excessive NO levels can promote the oxidation of cellular components, which may cause or exacerbate diseases such as hypertension, cardiovascular dysfunction, and inflammatory bowel disease (IBD). Previous studies have shown that reducing NO levels in the lumen can attenuate the clinical symptoms of IBD. Thus, we aimed to identify bacteria that can reduce RNS and that can be used as valuable probiotics. In this study, we isolated bacteria resistant to nitrite stress from human feces and used 16S and whole-genome sequencing to identify them as Lactiplantibacillus plantarum LP7 (LP7). The ability to survive at high nitrite levels and to decrease them was greater in the LP7 strain than in the reference strain L. plantarum ATCC14917 (ATCC14917). To characterize the LP7 genome in more detail, we performed a comparative genome analysis. However, the unique genes that directly confer the ability to withstand nitrite stress were not present in the LP7 genome. Furthermore, we performed transcriptomic analysis of LP7 and ATCC14917 cells treated with nitrite. We found that the expression levels of genes involved in the cell division process were induced in LP7, which showed a more regular rod-shape than ATCC14917. This could explain why LP7 can survive better than ATCC14917 under nitrite stress. Based on its ability to survive better in nitrite stress and decrease nitrite concentration, we suggest that LP7 could be a valuable probiotic strain.
© 2022. Author(s).

Entities:  

Keywords:  Lactiplantibacillus plantarum; RNS; human isolate; transcriptomic study

Mesh:

Substances:

Year:  2022        PMID: 35781626     DOI: 10.1007/s12275-022-2221-x

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  43 in total

1.  Two efficient nitrite-reducing Lactobacillus strains isolated from traditional fermented pork (Nanx Wudl) as competitive starter cultures for Chinese fermented dry sausage.

Authors:  Xi Chen; Jiapeng Li; Tong Zhou; Jinchun Li; Junna Yang; Wenhua Chen; Youling L Xiong
Journal:  Meat Sci       Date:  2016-06-11       Impact factor: 5.209

Review 2.  Nitric oxide in inflammatory bowel disease.

Authors:  Raymond K Cross; Keith T Wilson
Journal:  Inflamm Bowel Dis       Date:  2003-05       Impact factor: 5.325

3.  NO sensing by FNR: regulation of the Escherichia coli NO-detoxifying flavohaemoglobin, Hmp.

Authors:  Hugo Cruz-Ramos; Jason Crack; Guanghui Wu; Martin N Hughes; Colin Scott; Andrew J Thomson; Jeffrey Green; Robert K Poole
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

Review 4.  Glutaredoxins: glutathione-dependent redox enzymes with functions far beyond a simple thioredoxin backup system.

Authors:  Aristi Potamitou Fernandes; Arne Holmgren
Journal:  Antioxid Redox Signal       Date:  2004-02       Impact factor: 8.401

Review 5.  The mechanism of action of probiotics.

Authors:  Monica Boirivant; Warren Strober
Journal:  Curr Opin Gastroenterol       Date:  2007-11       Impact factor: 3.287

6.  Sensitive protein alignments at tree-of-life scale using DIAMOND.

Authors:  Benjamin Buchfink; Klaus Reuter; Hajk-Georg Drost
Journal:  Nat Methods       Date:  2021-04-07       Impact factor: 28.547

7.  Molecular characterization of Lactobacillus plantarum DMDL 9010, a strain with efficient nitrite degradation capacity.

Authors:  Yong-tao Fei; Dong-mei Liu; Tong-hui Luo; Gu Chen; Hui Wu; Li Li; Yi-gang Yu
Journal:  PLoS One       Date:  2014-11-25       Impact factor: 3.240

8.  eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale.

Authors:  Carlos P Cantalapiedra; Ana Hernández-Plaza; Ivica Letunic; Peer Bork; Jaime Huerta-Cepas
Journal:  Mol Biol Evol       Date:  2021-12-09       Impact factor: 16.240

9.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

10.  Phandango: an interactive viewer for bacterial population genomics.

Authors:  James Hadfield; Nicholas J Croucher; Richard J Goater; Khalil Abudahab; David M Aanensen; Simon R Harris
Journal:  Bioinformatics       Date:  2018-01-15       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.