Literature DB >> 35773370

A novel evidence-based predictor tool for hospitalization and length of stay: insights from COVID-19 patients in New York city.

Maan El Halabi1, James Feghali2, Jeeyune Bahk1, Paulino Tallón de Lara1, Bharat Narasimhan1, Kam Ho1, Mantej Sehmbhi1, Joseph Saabiye3, Judy Huang2, Georgina Osorio3, Joseph Mathew4, Juan Wisnivesky5, David Steiger6.   

Abstract

Predictive models for key outcomes of coronavirus disease 2019 (COVID-19) can optimize resource utilization and patient outcome. We aimed to design and internally validate a web-based calculator predictive of hospitalization and length of stay (LOS) in a large cohort of COVID-19-positive patients presenting to the Emergency Department (ED) in a New York City health system. The study cohort consisted of consecutive adult (> 18 years) patients presenting to the ED of Mount Sinai Health System hospitals between March 2020 and April 2020, diagnosed with COVID-19. Logistic regression was utilized to construct predictive models for hospitalization and prolonged (> 3 days) LOS. Discrimination was evaluated using area under the receiver operating curve (AUC). Internal validation with bootstrapping was performed, and a web-based calculator was implemented. From 5859 patients, 65% were hospitalized. Independent predictors of hospitalization and extended LOS included older age, chronic kidney disease, elevated maximum temperature, and low minimum oxygen saturation (p < 0.001). Additional predictors of hospitalization included male sex, chronic obstructive pulmonary disease, hypertension, and diabetes. AUCs of 0.881 and 0.770 were achieved for hospitalization and LOS, respectively. Elevated levels of CRP, creatinine, and ferritin were key determinants of hospitalization and LOS (p < 0.05). A calculator was made available under the following URL: https://covid19-outcome-prediction.shinyapps.io/COVID19_Hospitalization_Calculator/ . This study yielded internally validated models that predict hospitalization risk in COVID-19-positive patients, which can be used to optimize resource allocation. Predictors of hospitalization and extended LOS included older age, CKD, fever, oxygen desaturation, elevated C-reactive protein, creatinine, and ferritin.
© 2022. The Author(s), under exclusive licence to Società Italiana di Medicina Interna (SIMI).

Entities:  

Keywords:  Coronavirus disease 2019 (COVID-19); Hospitalization; Length of stay; Predictor model

Mesh:

Substances:

Year:  2022        PMID: 35773370      PMCID: PMC9245868          DOI: 10.1007/s11739-022-03014-9

Source DB:  PubMed          Journal:  Intern Emerg Med        ISSN: 1828-0447            Impact factor:   5.472


Introduction

Ten months after the initial outbreak of the 2019 novel coronavirus (SARS-Cov-2) in Wuhan, China, the disease evolved into a global pandemic. New York City (NYC) became the epicenter of the pandemic, accounting for a large proportion of infections in the United States [1]. The scale of infection imposed a major strain on medical infrastructure and resources leading to substantial shortages. Advanced age, hypoxia upon presentation, abnormal chest imaging, and elevated inflammatory markers appear to be strong predictors of worse outcomes [2-6]. Identifying predictors of hospitalization and length of stay (LOS), which are both highly relevant outcomes in patients with COVID-19, have been described. Increasing age and multimorbidity were associated with hospitalization in two studies of patients who tested positive for SARS-CoV-2 [4-7]. Understanding the determinants of the need for hospitalization and the projected LOS can optimize the utilization of hospital resources, aid in triaging, provide opportunities for timely health care assessment for patients, and improve shared decision-making [5]. This study aims to describe the demographics, clinical characteristics, and outcomes in a large COVID-19 cohort and to derive predictive models for hospitalization and prolonged LOS.

Methods

Patients

Data for the study were obtained from the Mount Sinai Data Warehouse, a registry of de-identified patient data extracted from the electronic medical record system (EPIC) across the Mount Sinai network. The database consisted of consecutive SARS-CoV-2-positive adult (> 18 years) patients presenting to an emergency department (ED) of one of the Mount Sinai Health System hospitals: Mount Sinai Hospital, Morningside, West, Brooklyn, Queens, all located in NYC between March 20 and April 23 2020. Diagnosis was confirmed by reverse transcriptase polymerase chain reaction (RT-PCR) of nasopharyngeal or oropharyngeal specimens. These data were collected starting from the initial phases of the pandemic, and all patients presented with symptoms consistent with COVID-19 including fever, cough, diarrhea, or shortness of breath. This study was approved by the Mount Sinai Institutional Review Board (IRB). Since no direct patient contact or intervention from the study group was needed, no patient consent was required.

Variables

Patient demographics, diagnosis codes (International Classification of Diseases-9/10-Clinical Modification (ICD-9/10-CM) code), and clinical data including symptoms, vital signs as well as laboratory data were collected on presentation. We defined a pre-existing condition as the presence of diagnosis codes (ICD 9/10) associated with specific diseases. The earliest available laboratory results during the first 24 h were used in the prediction analysis. The primary outcome was the need for hospital admission after presentation. A secondary outcome included an extended LOS defined as hospitalization lasting more than 3 days among patients that completed follow-up (i.e., we excluded patients that were still hospitalized at the time of data analysis). As recommended by Hintz et al. [8], we also excluded patients who died within 3 days to avoid a potentially misleading LOS value denoting good outcome. The LOS cut-off of 3 days was selected as Public health authorities including the Centers for Disease Control and Prevention, European Centre for Disease Prevention and Control, and the National Centre for Infectious Disease states that three days of symptom resolution, namely fever and respiratory symptoms, is the cut-off for safe discharge [1, 9]. Moreover, median time to readmission [10], median time to radiographic progression [11], as well as median time to clinical deterioration following admission [12] were all 3 days. Patients were tracked for mortality, need for intensive care, and intubation.

Statistical analysis

Analyses were performed using R (R Foundation for Statistical Computing, Austria) with statistical significance set at p ≤ 0.05. Descriptive statistics (n, % for categorical variables and mean ± SD for continuous variables) were used to summarize the baseline demographic, clinical, and laboratory variables of the study population. Continuous variables were subsequently categorized using clinically relevant cut-offs. For the first outcome of interest, a univariable analysis of factors associated with the need for hospitalization consisting of a Chi-square or Fischer exact test for categorical variables and the Student’s t test for continuous variables was conducted. Characteristics with a p value < 0.1 were subsequently entered a stepwise logistic regression model. Given the amount of missing data for laboratory values, these variables were left out of this step-wise process. Collinearity between variable pairs was evaluated using a strict variance inflation factor (VIF) cut-off of 3. Model discrimination was assessed using a receiver operating characteristic (ROC) curve analysis to obtain an area under the curve (AUC). Bootstrapping with 1000 samples with replacement was utilized to calculate an optimism-corrected AUC to check for possible overfitting [13, 14]. Calibration was evaluated using the Hosmer–Lemeshow test with an adjusted number of subgroups to account for a large sample size in our study [15]. In hospitalized patients that completed follow-up and survived, a similar process consisting of univariable analysis, stepwise multivariable logistic regression for factors independently associated with an extended LOS. Finally, we developed a web-based calculator that uses the models to predict the probability of a patient requiring hospitalization and extended LOS using readily available components of the history and vital signs on first patient encounter using the Shiny package from R.

Results

The cohort consisted of 5859 patients with a mean age of 60.5 years (SD = 17.5 years) with 3253 males (56%). Racial, ethnic groups included 1373 (24%) white, 1576 (28%) black, 229 (4%) Asian, 140 (3%) Native Hawaiian/Pacific Islander, and 2351 (41%) with other ethnicities. The baseline demographic and clinical characteristics are summarized in Table 1.
Table 1

Patient demographics, comorbidities, and vital signs on presentation

Characteristic*Value
Demographics
Age, years, mean (SD)60.5 ± 17.5
Race (n = 5669)
 White1373 (24)
 African American1576 (28)
 Asian229 (4)
 Native Hawaiian or Other Pacific Islander140 (2)
 Other2351 (41)
Sex, female2606 (44)
Body mass index, kg/m2 (n = 4201)29.19 ± 8.39
Ever smoked (n = 4424)1282 (29)
Comorbidities
 Asthma257 (4)
 COPD176 (3)
 Hypertension1627 (28)
 Diabetes1157 (20)
 CKD524 (9)
 HIV90 (2)
 Cancer322 (5)
Vital signs
 Temperature max, degrees Celsius (n = 5848)38 ± 1.2
 Heart rate, beats per minute (n = 5850)95.7 ± 19
 Respiratory rate, breaths per minute (n = 5844)20.5 ± 5.3
 Systolic blood pressure, mmHg (n = 5841)131.6 ± 23.1
 Diastolic blood pressure, mmHg (n = 5841)75.5 ± 13.8
 %O2 saturation minimum (n = 5848)87.5 ± 15.6

HIV human immunodeficiency virus; COPD chronic obstructive pulmonary disorder

*Numbers in parentheses represent number of patients without missing data

Patient demographics, comorbidities, and vital signs on presentation HIV human immunodeficiency virus; COPD chronic obstructive pulmonary disorder *Numbers in parentheses represent number of patients without missing data

Univariable analysis, hospitalization

Out of 5859 patients, 3794 (65%) were hospitalized. Demographic factors and comorbidities that were significantly associated (p < 0.001) with hospitalization on univariable analysis included older age, race, male sex, ever smoking, history of chronic obstructive pulmonary disease (COPD), hypertension, obesity, diabetes, chronic kidney disease (CKD), and cancer. With regard to vital signs, maximum temperature of 38 degrees Celsius or more, systolic blood pressure < 90 mmHg, minimum percent oxygen saturation < 90%, elevated C-reactive protein and ferritin, were significantly associated with hospitalization (p < 0.001). Table 2 summarizes univariable analysis.
Table 2

Univariable Predictors of need for hospitalization

CharacteristicNo admission (n = 2065)Admission (n = 3794)p value
Demographics
Age < 0.001†
 19–44 years808 (39)397 (10)
 45–65 years854 (41)1350 (36)
  > 65 years403 (20)2047 (54)
Race0.001†
 White471 (24)902 (25)
 Black608 (30)968 (26)
 Asian87 (4)142 (4)
 Native Hawaiian or Other Pacific Islander62 (3)78 (2)
 Other775 (39)1576 (43)
Sex, female1038 (50)1568 (41) < 0.001†
Comorbidities
 Ever smoked331 (22)951 (33) < 0.001†
 Asthma77 (4)180 (5)0.070
 COPD19 (1)157 (4) < 0.001†
 Hypertension303 (15)1324 (35) < 0.001†
 Obesity (BMI ≥ 30 kg/m2)286 (35)1233 (37)0.306
 Diabetes210 (10)947 (25) < 0.001†
 CKD72 (3)452 (12) < 0.001†
 HIV25 (1)65 (2)0.135
 Cancer71 (3)251 (7) < 0.001†
Vital Signs
Temperature maximum < 0.001†
  < 38 degrees Celsius1638 (80)1447 (38)
  ≥ 38 degrees Celsius416 (20)2347 (62)
Systolic blood pressure < 0.001†
  < 90 mmHg23 (1)99 (3)
  ≥ 90 mmHg2030 (99)3687 (97)
%O2 saturation minimum < 0.001†
  < 9085 (4)1980 (53)
  ≥ 901956 (96)1768 (47)
Lab values
ALT (U/L)0.291
 1–45*406 (73)2493 (70)
 46–135128 (23)886 (25)
  > 13523 (4)186 (5)
AST (U/L) < 0.001†
 1–35*232 (45)1248 (36)
 36–105247 (48)1808 (52)
  > 10540 (8)426 (12)
Creatinine (mg/dL) < 0.001†
 0–1*457 (57)1750 (46)
 1–2273 (34)1258 (33)
  > 267 (8)770 (20)
CRP (mg/L) < 0.001†
 0.0–5.0*6 (5)23 (2)
 5.1–10064 (52)500 (38)
  > 10052 (43)784 (60)
D-dimer (mcg/ml)0.382
 0.0–0.5*94 (9)190 (10)
 0.6–1.5447 (42)772 (40)
  > 1.5511 (49)966 (50)
Ferritin (ng/mL)0.005†
 30–400*370 (33)566 (27)
 401–50081 (7)145 (7)
  > 500678 (60)1356 (66)
Anemic hemoglobin‡268 (37)537 (39)0.378
LDH (U/L)0.243
 100–220*65 (6)96 (5)
 221–25050 (5)79 (4)
  > 250940 (89)1764 (91)
Procalcitonin > 0.5 ng/mL328 (29)595 (29)0.951
Troponin (ng/mL)0.747
 0.0–0.03*531 (52)952 (51)
 0.04–0.1250 (24)448 (24)
  > 0.1250 (24)480 (25)
WBC count (cells/mm3)0.904
  < 4000156 (9)220 (9)
 4000–10,9991158 (70)2534 (70)
  ≥ 11,000340 (21)758 (21)

ALT alanine aminotransferase; AST aspartate aminotransferase; COPD chronic obstructive pulmonary disorder; CRP C-reactive protein; FEU fibrinogen equivalent units; HIV human immunodeficiency virus; LDH lactate dehydrogenase; WBC white blood cell

*Numbers in parentheses represent number of patients without missing data

†Statistically significant (p ≤ 0.05)

‡Defined as below 13 g/dL in males and below 12 g/dL in females

*Reference value

Univariable Predictors of need for hospitalization ALT alanine aminotransferase; AST aspartate aminotransferase; COPD chronic obstructive pulmonary disorder; CRP C-reactive protein; FEU fibrinogen equivalent units; HIV human immunodeficiency virus; LDH lactate dehydrogenase; WBC white blood cell *Numbers in parentheses represent number of patients without missing data †Statistically significant (p ≤ 0.05) ‡Defined as below 13 g/dL in males and below 12 g/dL in females *Reference value

Adjusted analysis, hospitalization

Independent predictors of hospitalization included older age, male sex, COPD, hypertension, diabetes, CKD, elevated maximum temperature, and low minimum percent oxygen saturation. The optimal multivariable model resulting from stepwise logistic regression is summarized in Table 3, and consisted of age (OR = 6.29; 95% CI [1.83–2.63] for older adults (> 65 years) compared to younger adults (18–44 years), male sex (OR = 1.35 [1.17–1.55]), COPD (OR = 1.74 [1.00–3.03]), hypertension (OR = 1.39 [1.13–1.70]), diabetes (OR = 1.45 [1.16–1.81]), CKD (OR = 1.69 [1.23–2.32]), elevated maximum temperature (OR = 4.98 [4.28–5.79]), and low minimum oxygen saturation (OR = 13.40 [10.59–16.96]). The AUC for the model was 0.881 (95% CI 0.872–0.890). Bootstrap validation yielded negligible optimism of 0.0013 which translates into an optimism-corrected AUC of 0.880, indicating absence of significant overfitting. The Hosmer–Lemeshow test yielded a non-significant p value, indicating appropriate calibration.
Table 3

Optimal multivariable logistic regression model predictive of need for hospitalization (n = 5787)

VariableOdds ratio [95% CI]
Age, 18–44 years as reference
 45–652.19 [1.83–2.63]
  > 656.29 [5.15–7.69]
Sex, male vs. female1.35 [1.17–1.55]
COPD1.74 [1.00–3.03]
Hypertension1.39 [1.13–1.70]
Diabetes1.45 [1.16–1.81]
CKD1.69 [1.23–2.32]
Temperature max ≥ 38 degrees Celsius4.98 [4.28–5.79]
%O2 saturation minimum < 9013.40 [10.59–16.96]

1.2% of the data were missing at least one of the above variables

COPD chronic obstructive pulmonary disorder

*Statistically significant (p ≤ 0.05)

Optimal multivariable logistic regression model predictive of need for hospitalization (n = 5787) 1.2% of the data were missing at least one of the above variables COPD chronic obstructive pulmonary disorder *Statistically significant (p ≤ 0.05)

Length of stay

The course of the study population is described in Fig. 1. Out of 3794 patients requiring hospitalization, 631 (17%) were excluded as were still hospitalized at the time of analysis, leaving 3163 patients. There was a mortality rate of 28% (897/3163) among hospitalized patients and 17% (897/5228) among all patients who completed follow-up (i.e., discharged from ED or inpatient care). In addition, 16% (492/3163) of hospitalized patients required admission into an intensive care unit, and 13% (401/3163) required intubation. Among the 897 patients who died, 386 (43%) required admission into an ICU, and 315 (35%) were intubated.
Fig. 1

Flow diagram summarizing the course of COVID-19-positive patients

Flow diagram summarizing the course of COVID-19-positive patients After excluding patients who died within 3 days, the mean LOS was 7.3 days (SD = 5.3 days; median = 6 days; IQR = 6 days), and 2177 of the remaining 2892 patients (75%) required an LOS exceeding 3 days. The characteristics of hospitalized patients with comparisons between early- and late-discharge patients are summarized in Fig. 2. Factors that were independently associated with an extended LOS included older age (OR = 1.03 [1.02–1.04]), CKD (OR = 1.91 [1.35–2.71]), elevated maximum temperature (OR = 2.91 [2.40–3.53]), and low minimum oxygen saturation (OR = 3.89 [3.16–4.79]). The univariable analysis and optimal adjusted model are summarized in Table 4. Age provided better discrimination when employed as a continuous variable. The stepwise model provided an AUC of 0.770 (95% CI 0.752–0.789). Bootstrap validation yielded a negligible optimism of 0.0029 which translates into a bias-corrected AUC of 0.768. The Hosmer–Lemeshow test yielded a non-significant p value indicating appropriate calibration.
Fig. 2

Description of hospitalized patients (n = 3163)

Table 4

Univariable and multivariable analysis of factors associated with prolonged length of stay (> 3 days) in surviving hospitalized patients (n = 2892)

UnivariableStepwise Multivariable
CharacteristicOdds ratio [95% CI]p valueOdds ratio [95% CI]
Demographics
Age, per year1.03 [1.02–1.04] < 0.001*1.03 [1.02–1.04]
Race, White as reference0.012*
 Black0.81 [0.63–1.03]0.089
 Asian0.89 [0.54–1.45]0.627
 Native Hawaiian/Pacific Islander0.80 [0.44–1.48]0.479
 Other0.67 [0.53–0.84]0.001*
Sex, male vs. female0.98 [0.82–1.16]0.791
Comorbidities
 Ever smoked1.18 [0.96–1.46]0.113
 Asthma1.30 [0.85–1.97]0.224
 COPD1.93 [1.13–3.30]0.017*
 Hypertension1.42 [1.18–1.70] < 0.001*
 Obese (BMI ≥ 30 kg/m2)0.91 [0.67–1.23]0.534
 Diabetes1.41 [1.14–1.73]0.001*
 CKD2.21 [1.59–3.06] < 0.001*1.91 [1.35–2.71]
 HIV0.96 [0.52–1.78]0.899
 Cancer2.17 [1.42–3.32] < 0.001*
Vital Signs
 Temperature max ≥ 38 degrees Celsius2.83 [2.38–3.36] < 0.001*2.91 [2.40–3.53]
 %O2 saturation minimum < 904.93 [4.04–6.02] < 0.001*3.89 [3.16–4.79]
 Systolic blood pressure < 90 mmHg1.22 [0.70–2.13]0.478
Lab values
ALT, 1–45 U/L as reference0.017*
 46–1350.83 [0.68–1.02]0.076
  > 1350.62 [0.42–0.91]0.014*
AST, 1–35 U/L as reference0.769
 36–1051.03 [0.85–1.25]0.763
  > 1051.12 [0.82–1.54]0.470
Creatinine, 0–1 mg/dL as reference < 0.001*
 1–21.66 [1.37–2.02] < 0.001*
  > 22.43 [1.86–3.19] < 0.001*
CRP, 0.0–5.0 mg/L as reference < 0.001*
 5.1–1001.37 [0.53–3.52]0515
  > 1002.83 [1.10–7.29]0.031*
D-dimer, 0.0–0.5 mcg/ml FEU as reference0.183
 0.6–1.51.37 [0.92–2.04]0.121
  > 1.51.13 [0.77–1.67]0.528
Ferritin, 30–400 ng/mL as reference0.013*
 401–5002.37 [1.30–4.33]0.005*
  > 5001.01 [0.78–1.31]0.934
Anemic hemoglobin‡0.99 [0.74–1.32]0.922
LDH, 100–220 U/L as reference0.059
 221–2502.52 [1.12–5.565]0.026*
  > 2501.64 [1.01–2.69]0.050*
Procalcitonin > 0.5 ng/mL0.92 [0.72–1.18]0.505
Troponin, 0.0–0.03 ng/ml as reference0.248
 0.04–0.10.92 [0.68–1.24]0.577
  > 0.10.78 [0.59–1.04]0.095
WBC count, normal range as reference0.549
  < 40000.85 [0.64–1.14]0.280
  ≥ 11,0001.00 [0.80–1.25]0.442
Medications, none as reference < 0.001*
Azithromycin only0.88 [0.63–1.23]0.448
Hydroxychloroquine only2.49 [1.84–3.37] < 0.001*
Azithromycin + Hydroxychloroquine3.67 [2.87–4.70] < 0.001*

ALT alanine aminotransferase; AST aspartate aminotransferase; COPD chronic obstructive pulmonary disorder; CRP C-reactive protein; FEU fibrinogen equivalent units; HIV human immunodeficiency virus; LDH lactate dehydrogenase; WBC white blood cell

*Statistically significant (P ≤ 0.05)

Description of hospitalized patients (n = 3163) Univariable and multivariable analysis of factors associated with prolonged length of stay (> 3 days) in surviving hospitalized patients (n = 2892) ALT alanine aminotransferase; AST aspartate aminotransferase; COPD chronic obstructive pulmonary disorder; CRP C-reactive protein; FEU fibrinogen equivalent units; HIV human immunodeficiency virus; LDH lactate dehydrogenase; WBC white blood cell *Statistically significant (P ≤ 0.05) A combined calculator of likelihood of hospitalization and extended LOS can be accessed with the following URL:

Discussion

We analyzed a large cohort of 5859 COVID-19 patients in the United States. The results yielded internally validated models with good discrimination that were able to predict both the need for hospitalization, as well as the risk of prolonged hospitalization among admitted COVID-19 patients.

Hospitalization

There remains a relative paucity of US studies analyzing hospitalization rates and their determinants. Petrilli et al. analyzed factors associated with hospitalization in a cohort of 4103 COVID-19 patients presenting to New York University (NYU) Langone Health system [16]. The inclusion criteria however included both inpatient and outpatient visits rather than ED visits; hence, a lower hospitalization rate of 48.7% was reported, compared to 65% in our cohort, which only included patients evaluated in the ED. In concordance with our results, identified risk factors for hospitalization included increased age, CKD, diabetes, and male gender. Other important factors included obesity, race, heart failure, hyperlipidemia, and tobacco use. Similarly, Richardson et al. identified the characteristics of 5700 hospitalized COVID-19 patients at the Northwell Health System, but also excluded ED visits [17]. Although the authors did not construct predictive risk models in these studies, we expect our calculator to be generalizable to these cohorts and other urban settings given the significant overlap in patient demographics and risk factors, but external validation remains warranted. While admission risk calculators have been developed to estimate hospital utilization for COVID-19, they have limited applications to the US adult population since they included pediatric [18] and/or non-US [19] populations. Moreover, the NYU study and the Cleveland Clinic health system study by Jehi et al. lacked important objective predictors (e.g., vital signs, laboratory values) [20]. Our data identified key vital signs, such as fever and oxygen desaturation, and important laboratory values, such as AST, ferritin, CRP, and creatinine, but not procalcitonin and white blood cell counts, predictive of hospitalization. The advantages of our study lie in the utilization of an exceptionally large multi-ethnic NYC population at the height of the pandemic to develop a concise and practical tool with objective measures of hospitalization risk. One of the largest published studies on hospitalized COVID-19 patients consists of a descriptive analysis of 5700 patients presenting to the Northwell hospital system in NYC [10]. The reported overall median LOS was 4.1 days, including patients who died during hospitalization. 3066 out of the 5700 (54%) patients were still hospitalized at the time of analysis and therefore did not complete follow-up. Among hospitalized patients discharged alive, the median LOS increased from 2.5 days in the 20–29 years age group to 4.8 day in 90 years and above group. Although no statistical significance was investigated, this trend closely matches our identified association of extended LOS with increasing age. Rees et al. reported a pooled median LOS of 14 days in China and of 5 days outside of China and attributed this difference to variation in criteria for admission and discharge as well as heterogeneity in timing in relation to the pandemic [21]. Our median LOS of 6 days is in close agreement. Worldwide variation also underscores the importance of verifying applicability of prediction models before implementation across geographical regions. To our knowledge, no internally validated predictive models for LOS derived from readily available demographic, comorbidity, and clinical data in COVID-19 patients exists in the literature. Our data highlight the key predictive value of age, CKD, temperature, oxygen saturation, elevated levels of CRP, creatinine, and ferritin, which can identify patients requiring more hospital resources.

Mortality

Among 3163 hospitalized patients who completed follow-up, the mortality rate was 28% which is comparable to the rate of 21% identified in the corresponding NYC cohort of 2634 patients [10]. A study by Zhou et al. of 191 hospitalized patients in Wuhan, China similarly reported a mortality rate of 28% (54/191). Our data confirm previously reported mortality rates among hospitalized COVID-19 patients and enhances precision using the largest hospitalized cohort with completed follow-up to date. Grasselli et al. reported a mortality rate of 26% among 1581 ICU COVID-19 patients in Lombardy region of Italy [6]. In general, case fatality rates reported in the literature include 2.3% (1023 deaths of 44,672 confirmed cases) in China [22] and 7.2% (100 out of 1,625 patients) in Italy [23]. Our ICU admission rate of 16% and intubation rate of 13% mirrored those of Richardson et al. reporting rates of 14% and 12%, respectively in the Northwell cohort [10].

Previous models

A systematic review by Wynants et al. which discussed 10 previously published prognostic models for COVID-19 patients, identified 9 studies: 6 focused on mortality, 2 focused on the development of critical illness, and 1 focused on LOS [3]. All studies were based in China, and the largest sample size for model derivation was 577 patients. The LOS model was based solely on CT imaging findings and predicted LOS greater than 10 days using a limited sample of 26 COVID-19 patients [24]. The findings described in our study underscore the importance of incorporating comorbidity and clinical data, which even alone, can explain a large proportion of variance in outcomes. Otherwise, age, sex, hypertension, LDH, and CRP constituted some of the main predictors of mortality and critical illness models [25-28]. Main criticisms of previous models included the lack of calibration assessment and the absence of a readily available format for use in clinical practice [3]. Our analysis ensured adequate calibration and rendered the models easily accessible through a user-friendly web-based calculator.

Utility

The main strength of this calculator lies in its ability to provide accurate discrimination of illness requiring hospitalization and prolonged LOS based on simple clinical and laboratory variables that are readily available at the earliest point of contact. Radiological data were not included as this would limit the broad application of the model, including in resource-constrained environments. Not all patients receive imaging studies on initial ED presentation, and a significant proportion of initial chest radiography may be normal in mild or early COVID-19 [29, 30]. While the quantitative burden of consolidation or ground glass opacities at Chest CT can be used to predict clinical deterioration and death, this use of CT is not a standard of care [31]. Our model may be used for risk stratification for patients with COVID-19, particularly in outpatients setting as a decision-support tool for referring patients for emergency care. The application of the model in an outpatient setting would have to be validated. The tool may also help to supply prognostic information that would aid in providing expectations on possible LOS for patients and families.

Limitations

Our results were extrapolated from a restricted geographic area and the lack of standardized guidelines warrant an external validation. Lower performance of our model on LOS, which is largely influenced by local standards of care, supports this. As the data were based on a particular cohort of COVID-19 (alpha variant) prior to the development of vaccines, our model’s predictive performance on new variants and a vaccinated population may be limited. However, it should be noted that six hospitals of MSHS serve a racially diverse population with a wide range in incomes and chronic disease burden. Although our model can serve as an adjunct during an initial evaluation, analyses of harder outcomes (mortality, ICU transfer, need for ventilation) will be helpful in guiding further care during hospitalizations.

Conclusion

Age, comorbidities and vital signs on admission were predictors of hospitalization and length of stay in COVID-19 patients presenting to the ED. The prediction tool derived from this study can help design resource allocation during a surge of COVID-19 patients presenting to hospital EDs and outpatient settings, help guide quality of care, and assist in designing future studies on the triage and management of patients with COVID-19.
  26 in total

1.  Defining the Epidemiology of Covid-19 - Studies Needed.

Authors:  Marc Lipsitch; David L Swerdlow; Lyn Finelli
Journal:  N Engl J Med       Date:  2020-02-19       Impact factor: 91.245

2.  Baseline Characteristics and Outcomes of 1591 Patients Infected With SARS-CoV-2 Admitted to ICUs of the Lombardy Region, Italy.

Authors:  Giacomo Grasselli; Alberto Zangrillo; Alberto Zanella; Massimo Antonelli; Luca Cabrini; Antonio Castelli; Danilo Cereda; Antonio Coluccello; Giuseppe Foti; Roberto Fumagalli; Giorgio Iotti; Nicola Latronico; Luca Lorini; Stefano Merler; Giuseppe Natalini; Alessandra Piatti; Marco Vito Ranieri; Anna Mara Scandroglio; Enrico Storti; Maurizio Cecconi; Antonio Pesenti
Journal:  JAMA       Date:  2020-04-28       Impact factor: 56.272

3.  Association Between Statewide School Closure and COVID-19 Incidence and Mortality in the US.

Authors:  Katherine A Auger; Samir S Shah; Troy Richardson; David Hartley; Matthew Hall; Amanda Warniment; Kristen Timmons; Dianna Bosse; Sarah A Ferris; Patrick W Brady; Amanda C Schondelmeyer; Joanna E Thomson
Journal:  JAMA       Date:  2020-09-01       Impact factor: 56.272

4.  Factors associated with hospital admission and critical illness among 5279 people with coronavirus disease 2019 in New York City: prospective cohort study.

Authors:  Christopher M Petrilli; Simon A Jones; Jie Yang; Harish Rajagopalan; Luke O'Donnell; Yelena Chernyak; Katie A Tobin; Robert J Cerfolio; Fritz Francois; Leora I Horwitz
Journal:  BMJ       Date:  2020-05-22

5.  Characteristics and predictors of hospitalization and death in the first 11 122 cases with a positive RT-PCR test for SARS-CoV-2 in Denmark: a nationwide cohort.

Authors:  Mette Reilev; Kasper Bruun Kristensen; Anton Pottegård; Lars Christian Lund; Jesper Hallas; Martin Thomsen Ernst; Christian Fynbo Christiansen; Henrik Toft Sørensen; Nanna Borup Johansen; Nikolai Constantin Brun; Marianne Voldstedlund; Henrik Støvring; Marianne Kragh Thomsen; Steffen Christensen; Sophie Gubbels; Tyra Grove Krause; Kåre Mølbak; Reimar Wernich Thomsen
Journal:  Int J Epidemiol       Date:  2020-10-01       Impact factor: 7.196

6.  SARS-CoV-2 Testing in Florida, Illinois, and Maryland: Access and Barriers.

Authors:  Steven J Clipman; Amy Wesolowski; Shruti H Mehta; Smisha Agarwal; Sarah E Cobey; Derek A T Cummings; Dustin G Gibson; Alain B Labrique; Gregory D Kirk; Sunil S Solomon
Journal:  medRxiv       Date:  2020-12-24

7.  Predicting time to hospital discharge for extremely preterm infants.

Authors:  Susan R Hintz; Carla M Bann; Namasivayam Ambalavanan; C Michael Cotten; Abhik Das; Rosemary D Higgins
Journal:  Pediatrics       Date:  2009-12-14       Impact factor: 7.124

8.  Exposure to violence, chronic stress, nasal DNA methylation, and atopic asthma in children.

Authors:  Qi Yan; Erick Forno; Andres Cardenas; Cancan Qi; Yueh-Ying Han; Edna Acosta-Pérez; Soyeon Kim; Rong Zhang; Nadia Boutaoui; Glorisa Canino; Judith M Vonk; Cheng-Jian Xu; Wei Chen; Emily Oken; Diane R Gold; Gerard H Koppelman; Juan C Celedón
Journal:  medRxiv       Date:  2020-11-04

9.  Clinical progression of patients with COVID-19 in Shanghai, China.

Authors:  Jun Chen; Tangkai Qi; Li Liu; Yun Ling; Zhiping Qian; Tao Li; Feng Li; Qingnian Xu; Yuyi Zhang; Shuibao Xu; Zhigang Song; Yigang Zeng; Yinzhong Shen; Yuxin Shi; Tongyu Zhu; Hongzhou Lu
Journal:  J Infect       Date:  2020-03-19       Impact factor: 6.072

10.  Prediction models for diagnosis and prognosis of covid-19: systematic review and critical appraisal

Authors:  Laure Wynants; Ben Van Calster; Gary S Collins; Richard D Riley; Georg Heinze; Ewoud Schuit; Marc M J Bonten; Darren L Dahly; Johanna A A Damen; Thomas P A Debray; Valentijn M T de Jong; Maarten De Vos; Paul Dhiman; Maria C Haller; Michael O Harhay; Liesbet Henckaerts; Pauline Heus; Michael Kammer; Nina Kreuzberger; Anna Lohmann; Kim Luijken; Jie Ma; Glen P Martin; David J McLernon; Constanza L Andaur Navarro; Johannes B Reitsma; Jamie C Sergeant; Chunhu Shi; Nicole Skoetz; Luc J M Smits; Kym I E Snell; Matthew Sperrin; René Spijker; Ewout W Steyerberg; Toshihiko Takada; Ioanna Tzoulaki; Sander M J van Kuijk; Bas van Bussel; Iwan C C van der Horst; Florien S van Royen; Jan Y Verbakel; Christine Wallisch; Jack Wilkinson; Robert Wolff; Lotty Hooft; Karel G M Moons; Maarten van Smeden
Journal:  BMJ       Date:  2020-04-07
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