| Literature DB >> 35769703 |
Jianqing Wang1, Weitao Mo1, Yan Wu1, Xiaomei Xu1, Yi Li1, Jianming Ye2, Xiaobo Lai1,2.
Abstract
Chinese Herbal Slices (CHS) are critical components of Traditional Chinese Medicine (TCM); the accurate recognition of CHS is crucial for applying to medicine, production, and education. However, existing methods to recognize the CHS are mainly performed by experienced professionals, which may not meet vast CHS market demand due to time-consuming and the limited number of professionals. Although some automated CHS recognition approaches have been proposed, the performance still needs further improvement because they are primarily based on the traditional machine learning with hand-crafted features, resulting in relatively low accuracy. Additionally, few CHS datasets are available for research aimed at practical application. To comprehensively address these problems, we propose a combined channel attention and spatial attention module network (CCSM-Net) for efficiently recognizing CHS with 2-D images. The CCSM-Net integrates channel and spatial attentions, focusing on the most important information as well as the position of the information of CHS image. Especially, pairs of max-pooling and average pooling operations are used in the CA and SA module to aggregate the channel information of the feature map. Then, a dataset of 14,196 images with 182 categories of commonly used CHS is constructed. We evaluated our framework on the constructed dataset. Experimental results show that the proposed CCSM-Net indicates promising performance and outperforms other typical deep learning algorithms, achieving a recognition rate of 99.27%, a precision of 99.33%, a recall of 99.27%, and an F1-score of 99.26% with different numbers of CHS categories.Entities:
Keywords: artificial intelligence; automated recognition; computational intelligence; intelligent data analysis; spatial attention module
Year: 2022 PMID: 35769703 PMCID: PMC9234258 DOI: 10.3389/fnins.2022.920820
Source DB: PubMed Journal: Front Neurosci ISSN: 1662-453X Impact factor: 5.152
FIGURE 1Different shape types of Chinese herbal slices (CHS).
FIGURE 2Examples of easily confused CHS. Astragali radix (left) and sophorae flavescentis radix (right).
FIGURE 3ResNeSt block. h,w,c refers to the height, width, and number of channels of the feature map, respectively; k is the number of cardinal groups; r is the number of splits within a cardinal group.
FIGURE 4Block with the CCSM module.
FIGURE 5Split attention module.
FIGURE 6Spatial attention module.
FIGURE 7Samples of CHS images in CHSD1.
FIGURE 8CHS in a sample grid tray.
CHS in CHSD2.
| Name of CHS |
| Caryophylli flos, notoginseng radix et rhizoma, salviae miltiorrhizae radix et rhizoma, mume fructus, ginseng radix et rhizoma, citrusaurantiuml. var.amaraengl., lycopodii herba, citri sarcodactylis fructus, flos citri sarcodactylis, gnaphaliumaffined. don, eupatorii herba, scorpio, semen benincasae, benincasae exocarpium, cassiae semen, pteris multifida poir, siphonostegiae herba, arisaematis rhizoma preparatum, polygonati rhizoma, bupleuri radix, scutellariae barbatae herba, lobeliae chinensis herba, magnoliae officinalis flos, albiziae cortex, albiziae flos, sanguisorba officinalis carbonisatum, kochiae fructus, lycii cortex, sedi herba, arecae pericarpium, sargentodoxae caulis, isatidis folium, rhei radix et rhizoma, rhei radix et rhizoma carbonisatum, gastrodiae rhizoma, gekko, pseudostellariae radix, magnoliae officinalis cortex, cremastrae pseudobulbus pleiones pseudobulbus, crataegi fructus carbonisatum, cyathulae radix, fritillariae cirrhosae bulbus, zingiberis rhizoma, siccus bufo, pogostemonis herba, desmodii styracifolii herba, angelicae sinensis radix, curcumae rhizoma, ficus carical., flos hibisci, oroxyli semen, aucklandiae radix, polygoni perfoliati herba, aurantii fructus immaturus, cinnamomi ramulus, mori folium, platycodonis radix, citri reticulatae semen, citrus tangerine pith, lycopi herba, piperis kadsurae caulis, dendrobii caulis, pumex, cortex erythrinae seu kalopanacis, sepiae endoconcha, lophatheri herba, sojae semen praeparatum, dioscoreae rhizoma, rhapontici radix, aspongopus, codonopsis radix, eupolyphaga steleophaga, sophorae flos, arctii fructus, moutan cortex, vaccariae semen, glycyrrhizae radix et rhizoma, oryzae fructus germinatus, xanthii fructus, raphani semen, vespae nidus, galli gigerii endothelium corneum, hordei fructus germinatus, astragali radix, glycyrrhizae radix et rhizoma praeparata cum melle, hirudo, ostreae concha, arcae concha, magnetitum, lysimachiae herba, spirodelae herba, moutan cortex, moutan cortex carbonisatum, pharbitidis semen, cibotii rhizoma, angelicae pubescentis radix, trichosanthis semen, trichosanthis pericarpium, nardostachyos radix et rhizoma, glycyrrhizae radix et rhizoma, sennae folium, bletillae rhizoma, hedyotis diffusa willd, gleditsiae spina, eucommiae cortex, amomi fructus, centellae herba, spermodermis phaseoli radiati, violae herba, carthami flos, gynostemma pentaphyllum, cinnamomi cortex, arisaema cum bile, sterculiae lychnophorae semen, picrorhizae rhizoma, phragmitis rhizoma, zanthoxyli pericarpium, semen zanthoxyli, citri grandis exocarpium, poria, poriae cutis, abuti lisemen, artemisiae scopariae herba, schizonepetae herba, tsaoko fructus, alpiniae katsumadai semen, hypericum seniavinii maxim., puerariae lobatae radix, taraxaci herba, corni fructus, ligustici rhizoma et radix, polygoni cuspidati rhizoma et radix, scolopendra, mori cortex, cynanchi stauntonii rhizoma et radix, stemonae radix, perillae fructus, asteris radix et rhizoma, myristicae semen, ephedrae herba, cicadae periostracum, rubi fructus, chebulae fructus, eriocauli flos, amomi fructus rotundus, siegesbeckiae herba, dryopteridis crassirhizomatis rhizoma, dryopteridis crassirhizomatis rhizoma carbonisatum, vignae semen, paeoniae radix rubra, plantaginis herba, pheretima, angelicae sinensis radix, trionycis carapax, testudinis carapax et plastrum, paridis rhizoma, tinosporae radix, rosae laevigatae fructus, lonicerae japonicae flos, uncariae ramulus cum uncis, stephaniae tetrandrae radix, saposhnikoviae radix, asini corii colla, citri reticulatae pericarpium, dalbergiae odoriferae lignum, periplocae cortex, alpiniae officinarum rhizoma, euonymus alatus, spatholobi caulis, cervi cornu, cervi cornu degelatinatum, atractylodis rhizoma, coicis semen, ephedrae herba, phellodendri chinensis cortex, scutellariae radix, scutellariae radix carbonisatum, astragali radix, coptidis rhizoma, aconiti lateralis radix praeparata, gentianae radix et rhizoma, and solanum nigrum. |
FIGURE 9Sample images of CHSD2.
Dataset division.
| Dataset | Number of CHS images |
| Training Set | 11,466 |
| Testing Set | 2,730 |
| Total | 14,196 |
Recognition rate with different numbers of categories.
| Number of categories | Top-1 (%) |
| 50 | 99.49 |
| 100 | 99.34 |
| 150 | 99.33 |
| 182 | 99.27 |
Accuracy of different percentage of training set at different epochs.
| Percentage of training set | Epoch | ||||
| 30 | 60 | 90 | 120 | 150 | |
| 50% | 68.02% | 92.76% | 96.62% | 98.70% | 98.77% |
| 60% | 73.52% | 95.01% | 97.66% | 98.45% | 98.97% |
| 70% | 83.05% | 96.37% | 98.00% | 98.72% | 99.13% |
| 80% | 83.17% | 96.59% | 98.64% | 98.92% |
|
| 90% | 91.45% | 97.50% | 98.95% | 98.95% | 99.20% |
Bold values in refer to the results of the proposed module.
Evaluation results of the module.
| Model | Params ( | Top-1 (%) | |||
| ResNeSt101 | 48.3 | 98.97 | 99.05 | 98.97 | 98.96 |
| ResNeSt101+ MaxPooling | 48.3 | 99.01 | 99.09 | 99.01 | 99.00 |
| ResNeSt101+ CCSM-ReLU | 48.3 | 99.07 | 99.15 | 99.07 | 99.08 |
| ResNeSt101+ CCSM-GELU | 48.3 |
|
|
|
|
Bold values in refer to the results of the proposed module.
Recognition rate of different CHS categories.
| CHS | Recognition rate (%) |
| 166 CHS categories except as listed below | 100 |
| Gnaphalium affine D.don, scorpio, scutellariae barbatae herba, isatidis folium, oryzae fructus germinatus, piperis kadsurae caulis, arcae concha, glycyrrhizae radix et rhizoma, citri grandis exocarpium, hordei fructus germinatus, mori cortex, siegesbeckiae herba | 93.75 |
| Eucommiae cortex, angelicae sinensis radix, spatholobi caulis | 88.24 |
| Coicis semen | 87.50 |
FIGURE 10Samples of correctly recognized CHS categories. (A) Lonicerae japonicae flos. (B) Bletillae rhizoma. (C) Uncariae ramulus cum uncis. (D) Poria.
FIGURE 11Samples of CHS categories with recognition rate under 100%. (A) Angelicae sinensis radix. (B) Isatidis folium. (C) Mori cortex. (D) Siegesbeckiae herba.
FIGURE 12Hordei fructus germinatus (left) and oryzae fructus germinatus (right).
FIGURE 13Coicis semen.
FIGURE 14Samples of shape type of granule and mixed-shapes.
Recognition rate of different shape types.
| Shape types | Number of categories included | Percentage of data | Recognition rate (%) |
| Pieces | 45 | 25% | 98.72 |
| Silks | 13 | 7% | 99.51 |
| Segments | 29 | 16% | 97.88 |
| Blocks | 26 | 14% | 98.77 |
| Granules | 29 | 16% | 99.78 |
| Mixed-shapes | 40 | 22% | 96.66 |
Comparison of different residual structure models.
| Model | Params (M) | Top-1 (%) | F1 (%) | ||
| ResNet50 | 25.5 | 96.96 | 97.18 | 96.96 | 96.94 |
| ResNeXt50 | 25.0 | 98.13 | 98.28 | 98.13 | 98.13 |
| ResNeSt50 | 27.5 | 98.53 | 98.64 | 98.53 | 98.52 |
|
| 27.5 |
|
|
|
|
| ResNet101 | 44.5 | 97.88 | 98.03 | 97.84 | 97.83 |
| ResNeXt101 | 44.3 | 98.79 | 98.87 | 98.79 | 98.79 |
| ResNeSt101 | 48.3 | 98.97 | 99.05 | 98.97 | 98.96 |
|
| 48.3 |
|
|
|
|
Bold values in refer to the results of the proposed module.
FIGURE 15Box plot and violin plot of specificity and sensitivity score.