Literature DB >> 35765370

A fractional-order model with different strains of COVID-19.

Isa Abdullahi Baba1, Fathalla A Rihan2,3.   

Abstract

This study examines the dynamics of COVID-19 variants using a Caputo-Fabrizio fractional order model. The reproduction ratio R 0 and equilibrium solutions are determined. The purpose of this article is to use a non-integer order derivative in order to present information about the model solutions, uniqueness, and existence using a fixed point theory. A detailed analysis of the existence and uniqueness of the model solution is conducted using fixed point theory. For the computation of the iterative solution of the model, the fractional Adams-Bashforth method is used. Using the estimated values of the model parameters, numerical results are used to support the significance of the fractional-order derivative. The graphs provide useful information about the complexity of the model, and provide reliable information about the model for any case, integer or non-integer. Also, we demonstrate that any variant with the largest basic reproduction ratio will automatically outperform the other variant.
© 2022 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Adams–Bashforth technique; COVID-19 variants; Caputo–Fabrizio; Existence and uniqueness; Numerical scheme

Year:  2022        PMID: 35765370      PMCID: PMC9221295          DOI: 10.1016/j.physa.2022.127813

Source DB:  PubMed          Journal:  Physica A        ISSN: 0378-4371            Impact factor:   3.778


Introduction

Pathogen mutation has been a common phenomenon in disease spreading. Typical example can be seen from the emergence of H1N1 influenza virus in Mexico and the USA in the year 2009. H1N1 is the mutation of the seasonal influenza. Dengue fever, HIV, Tuberculosis, and some other sexually transmitted diseases come to existence as a result of more than one pathogen variants. Many researchers studied the dynamical nature of the pathogen–host interactions with more than one variant [1], [2], [3], [4]. It is also shown basic reproduction ratio decides which variant outperforms the other [5]. Possibility of mutation,co-infection, and exponential growth of the host population were studied [6], [7], [8], [9]. The global transmission and replication of SARSCOV-2, the causative agent of COVID-19 disease, gives rise to the mutations of the virus. This may alter the virus’ mode of transmission, the vaccines’ effectiveness and the severity of disease. Many variants surfaced, some of which have been identified by World Health Organization (WHO) as variants of concern (VOC). This is as result of the risks they pose and their ability to impact the effectiveness of the available vaccine [10], [11], [12], [13], [14], [15], [16], [17]. The generalization of classical integer calculus is the Fractional calculus. Due to hereditary properties and provision of a good description of the memory fractional order derivatives and fractional integrals play important role in the study of fractional calculus. Nowadays, FO differential equations are frequently used in exploring the dynamics of many real life phenomena [18], [19], [20], [21], [22], [23], [24]. Caputo–Fabrizio (CF) fractional derivative fractional order derivative was developed in 2015. This fractional order derivative is based on exponential kernel and the detail on the operator can be found in [25]. Many problems used Caputo–Fabrizio derivative to model problems in various fields [26], [27], [28]. The fundamental differences among the fractional derivatives are their different kernels which can be selected to meet the requirements of different applications. For example, the main differences between the Caputo fractional derivative, the Caputo–Fabrizio derivative, and the Atangana–Baleanu fractional derivative are that the Caputo derivative is defined using a power law, the Caputo–Fabrizio derivative is defined using an exponential decay law, and the Atangana–Baleanu derivative is defined using a Mittag-Leffler​ law [29], [30], [31]. Atangana found that the power law derivative of the Riemann–Liouville fractional derivative or the Caputo–Fabrizio fractional derivative provides noisy information due to its specific memory properties. However, the Caputo–Fabrizio fractional derivative gives less noise than the Riemann–Liouville [32], [33], [34]. Hence, in this research we choose Caputo–Fabrizio fractional derivative. Here, we consider two variants of COVID-19 in which one variant is a mutation of the other. A mutation is the sudden change in the genetic makeup that occurs either due to mistakes when DNA is copied or as a result of environmental factors. In this research new variant is assumed to be as a result of changes in the proteins that made up old variant. Due to the recent progress on fractional calculus and its wide applications, we intend to formulate and analyzed our model with Caputo–Fabrizio fractional derivative. The primary goal of this article is to use a fresh non-integer order derivative to study the model of COVID-19, to present information about the model solution’s, uniqueness and existence using a fixed point theory. It is also in our interest to formally examine the mathematical implications of linking the various infectious compartments in a sufficiently general manner. The paper is divided into six sections: Section 1 is an introduction, Section 2 is a glossary of terms, Section 3 is the model formulation, Section 4 is a study of the existence and uniqueness of the model’s solution, Section 5 is a study of the numerical scheme and numerical simulations of the model, and Section 6 is the paper’s conclusion.

Definitions

[29]

Caputo–Fabrizio fractional derivative for is defined as; is the normalized function that satisfies . When the above definition is reduced to; Let , and consider; then the corresponding fractional order integral is given as;

Formulation of the model

The model consists of six compartments; Susceptible , Exposed , Infected with new variant , Infected with old variant , Hospitalized individuals , and Recovered individuals . The total population is defined as; The model is described by the system of Caputo–Fabrizio fractional order differential equations of order below. We modify the fractional operator via an auxiliary parameter to avoid dimensional mismatching. with the following initial conditions; The meaning of parameters involved in the model is given in Table 1.
Table 1

Meaning of parameters.

ParameterMeaning
λRecruitment rate
μNatural death rate
β1Effective contact rate with new variant
β2Effective contact rate with old variant
α1Progression from Exposed class to Infective with New variant
α2Progression from Exposed class to Infective with Old variant
γ1Hospitalization rate due to new variant
γ2Hospitalization rate due to old variant
d1Death rate due to new variant
d2Death rate due to old variant
d3Death rate in the hospital
ΦRecovery rate in the hospital
Meaning of parameters.

Equilibria and basic reproduction number

The equilibrium solutions are obtained by solving the following system of equations; Four equilibrium solutions are obtained; Disease free equilibrium (), Endemic with respect to new variant (), Endemic with respect to old variant (), and Endemic with respect to both variants (). 1. The Disease free equilibrium () is given as; where . 2. Endemic with respect to new variant () is given as; where, Let, Therefore, this equilibrium only exists if . 3. Endemic equilibrium with respect to old variant () is given as; where, Let, Therefore, this equilibrium only exists if . 4. Endemic with respect to both variants () is given as; where, Therefore, this equilibrium only exists if . By applying the next generation matrix method presented in [28], basic reproduction ratio () is obtained to be;

Existence and uniqueness of solution

Here we apply fixed-point results to show the existence and uniqueness of the solutions of model (1). Let (1) be re-written in the following form; We apply fundamental theorem of Integration to write the system in fractional Volterra form [24]. Applying Caputo–Fabrizio integral operator definition 2, the system above becomes integral equation of Volterra type, with . Next, is to prove that the kernels satisfy Lipchitz continuity and subsequently contraction. The following theorem takes care of that; The kernel is Lipschitz. Moreover it satisfies contraction if the following inequality is satisfied; Consider , then where, are bounded functions. This implies; Hence is Lipschitz continuous. In addition if , then we have a contraction. In the same manner, we show the Lipschitz continuity and subsequent contraction of Recursively, the difference between successive terms in (1) is given as; with the following initial conditions; Considering and taking norm, we get; Applying triangular inequality, we get; From (2), we get This implies, In the same manner, Hence, we can write; The following theorem confirms the existence of the solution. The solution of the model exists if we can find in which the following inequality holds; By applying recursive technique on (2), (3), we obtain; Therefore, the solutions exist and are continuous. To confirm the functions above construct solutions of (1), we consider; Hence, Repeating the same procedure, At , we have; Taking limit on (4) as n approaches , we get, . Similarly, . Lastly, to show the uniqueness of the solutions of the model, we suppose there exist some solutions of the model say; , then Taking norm, we get Applying the Lipschitz continuity result, we get It simplifies to, If the condition below holds, then the solution is unique. Consider (5), that is since, then This implies, This is true for the remaining solutions. Hence, the model solution exists and is unique.

Numerical scheme and numerical simulations

In this section, we give an approximate solution of the Caputo–Fabrizio fractional order model for the dynamics of two-strain COVID-19 model using two-step​ fractional Adams–Bash forth technique [25]. We use fundamental theorem of Integration to write the system in fractional Volterra form. Consider the first equation in (1), for , we get Hence, the difference in successive terms is given as, over the interval . We can approximate interpolation polynomial; where . Also Simplifying, we get Similarly, we get We describe the numerical simulations to study the dynamics of the propose model for various values of and mode parameters. The parameter values used are obtained from [30], and they are; . Fig. 1, Fig. 2, Fig. 3, Fig. 4, Fig. 5, Fig. 6, show the influence of the variation in the fractional order on the biological behavior of the classes of model (1). It is clear from these Figures that the population of Susceptible individuals, Exposed individuals, New variant of COVID-19, Old variant of COVID-19, Hospitalized individuals and Recovered individuals have decreasing effect when is decreased from .
Fig. 1

Dynamics of Susceptible individuals for various values of .

Fig. 2

Dynamics of Exposed individuals for various values of .

Fig. 3

Dynamics of new variant of COVID-19 for various values of .

Fig. 4

Dynamics of old variant of COVID-19 for various values of .

Fig. 5

Dynamics of hospitalized individuals for various values of .

Fig. 6

Dynamics of Recovered individuals for various values of .

Dynamics of Susceptible individuals for various values of . Dynamics of Exposed individuals for various values of . Dynamics of new variant of COVID-19 for various values of . Dynamics of old variant of COVID-19 for various values of . Dynamics of hospitalized individuals for various values of . Dynamics of Recovered individuals for various values of . Fig. 7 compares the dynamics of new and old strain of COVID-19. This figure shows that the two variants can co-exist in the same population when their basic reproduction ratio is the same.
Fig. 7

Dynamics of new and old variants of COVID-19..

Dynamics of new and old variants of COVID-19.. Fig. 8 shows that when , then the new variant of COVID-19 outperform the old variant which leads to subsequent domination of the old variant by the new variant.
Fig. 8

Dynamics of new and old variants of COVID-19 when .

Dynamics of new and old variants of COVID-19 when . Fig. 9 shows that when , then the old variant of COVID-19 outperform the new variant which leads to subsequent domination of the new variant by the old variant.
Fig. 9

Dynamics of new and old variants of COVID-19 when .

Dynamics of new and old variants of COVID-19 when . It worth mentioning here that the fractional derivative with​ is defined in Caputo–Fabrizio sense, so introducing a convolution integral with a power-law memory kernel benefits in describing memory effects in dynamical systems. The decaying rate of the memory kernel depends on . A lower value of corresponding to more slowly-decaying time-correlation functions leads a long memory. Therefore, as , the influence of memory decreases.

Conclusion

The dynamics of COVID-19 variations were explored using a Caputo–Fabrizio fractional-order model. The model’s fundamental properties were studied. The next-generation matrix (NGM) approach was used to calculate the basic reproduction ratio . Equilibrium solutions are found by equating system (1) to zero and simultaneously solving the result. Fixed point theory is used to perform a detailed study of the existence and uniqueness of the model solution. The iterative solution of the model is computed using the fractional Adams–Bashforth technique. The numerical results are shown using the estimated values of the model parameters to justify the importance of the fractional-order derivative. The graphs provide useful information about the model’s complexity and the feasibility of obtaining reliable information about it.

CRediT authorship contribution statement

Isa Abdullahi Baba: Visualization, Investigation, Supervision, Software, Validation, Writing – review & editing. Fathalla A. Rihan: Conceptualization, Methodology, Software, Data curation, Writing – original draft.

Declaration of Competing Interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
  15 in total

1.  A competitive exclusion principle for pathogen virulence.

Authors:  H J Bremermann; H R Thieme
Journal:  J Math Biol       Date:  1989       Impact factor: 2.259

2.  The evolution of virulence in sexually transmitted HIV/AIDS.

Authors:  M Lipsitch; M A Nowak
Journal:  J Theor Biol       Date:  1995-06-21       Impact factor: 2.691

3.  Superinfection and the evolution of parasite virulence.

Authors:  M A Nowak; R M May
Journal:  Proc Biol Sci       Date:  1994-01-22       Impact factor: 5.349

4.  Bifurcation analysis of a discrete-time compartmental model for hypertensive or diabetic patients exposed to COVID-19.

Authors:  Muhammad Salman Khan; Maria Samreen; Muhammad Ozair; Takasar Hussain; J F Gómez-Aguilar
Journal:  Eur Phys J Plus       Date:  2021-08-18       Impact factor: 3.758

5.  Traveling waves in a model of influenza A drift.

Authors:  Juan Lin; Viggo Andreasen; Renato Casagrandi; Simon A Levin
Journal:  J Theor Biol       Date:  2003-06-21       Impact factor: 2.691

6.  A novel fractional mathematical model of COVID-19 epidemic considering quarantine and latent time.

Authors:  Prashant Pandey; Yu-Ming Chu; J F Gómez-Aguilar; Hadi Jahanshahi; Ayman A Aly
Journal:  Results Phys       Date:  2021-05-19       Impact factor: 4.476

7.  Mathematical modeling of coronavirus disease COVID-19 dynamics using CF and ABC non-singular fractional derivatives.

Authors:  Virender Singh Panwar; P S Sheik Uduman; J F Gómez-Aguilar
Journal:  Chaos Solitons Fractals       Date:  2021-02-04       Impact factor: 5.944

8.  A fuzzy fractional model of coronavirus (COVID-19) and its study with Legendre spectral method.

Authors:  J F Gómez-Aguilar; A A Alderremy; Shaban Aly; Khaled M Saad
Journal:  Results Phys       Date:  2020-12-29       Impact factor: 4.476

9.  Mathematical modeling of COVID-19 pandemic in India using Caputo-Fabrizio fractional derivative.

Authors:  Prashant Pandey; J F Gómez-Aguilar; Mohammed K A Kaabar; Zailan Siri; Abd Allah A Mousa
Journal:  Comput Biol Med       Date:  2022-04-14       Impact factor: 6.698

10.  Investigating a nonlinear dynamical model of COVID-19 disease under fuzzy caputo, random and ABC fractional order derivative.

Authors:  Mati Ur Rahman; Muhammad Arfan; Kamal Shah; J F Gómez-Aguilar
Journal:  Chaos Solitons Fractals       Date:  2020-08-25       Impact factor: 5.944

View more
  1 in total

1.  Stability Analysis of an Extended SEIR COVID-19 Fractional Model with Vaccination Efficiency.

Authors:  Mubashara Wali; Sadia Arshad; Jianfei Huang
Journal:  Comput Math Methods Med       Date:  2022-09-20       Impact factor: 2.809

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.