| Literature DB >> 35759244 |
Dina Suolitiken1, Yini Wang1, Zhili Jin1, Zhao Wang1.
Abstract
BACKGROUND: Although most adults are infected by Epstein-Barr virus (EBV), some patients develop highly lethal diseases associated with EBV infection, including EBV-hemophagocytic lymphohistiocytosis (EBV-HLH), chronic active EBV infections (CAEBV), and lymphoma, the pathogeneses of which remain to be investigated. The human leukocyte antigen (HLA) complex may be associated with the viral infection pathway, and, therefore, HLA alleles may be associated with EBV-related diseases and subpopulations of infected cells, studies related to EBV-associated diseases, and subpopulations of infected cells that were conducted in China are scarce.Entities:
Keywords: EBV; HLA; infection
Mesh:
Substances:
Year: 2022 PMID: 35759244 PMCID: PMC9210551 DOI: 10.1002/iid3.666
Source DB: PubMed Journal: Immun Inflamm Dis ISSN: 2050-4527
Frequencies of HLA‐A, ‐B, ‐C, ‐DRB1, and ‐DQB1 alleles determined using high‐resolution analysis in the EBV‐seropositive and EBV‐seronegative groups
| Allele frequency | EBV‐seropositive patients ( | EBV‐seronegative donors ( |
| Adjust | OR | 95% CI | |||
|---|---|---|---|---|---|---|---|---|---|
| A*01:01 | 29 | 0.0541 | 21 | 0.0493 | 0.7718 | 0.9611 | 1.1031 | 0.6197 | 1.9635 |
| A*02:01 | 59 | 0.1101 | 63 | 0.1479 | 0.097 | 0.5667 | 0.7127 | 0.4872 | 1.0426 |
| A*02:06 | 28 | 0.0522 | 31 | 0.0728 | 0.2233 | 0.7592 | 0.7023 | 0.4144 | 1.1904 |
| A*02:07 | 46 | 0.0858 | 32 | 0.0751 | 0.6346 | 0.9611 | 1.1559 | 0.7222 | 1.8499 |
| A*11:01 | 96 | 0.1791 | 78 | 0.1831 | 0.9328 | 0.9611 | 0.9734 | 0.6997 | 1.3543 |
| A*24:02 | 96 | 0.1791 | 72 | 0.169 | 0.7326 | 0.9611 | 1.0727 | 0.7665 | 1.5012 |
| A*33:03 | 45 | 0.084 | 32 | 0.0751 | 0.6345 | 0.9611 | 1.1284 | 0.7037 | 1.8095 |
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| B*40:01 | 43 | 0.0799 | 30 | 0.0704 | 0.625 | 0.9611 | 1.1467 | 0.7063 | 1.8617 |
| B*46:01 | 54 | 0.1004 | 38 | 0.0892 | 0.5826 | 0.9611 | 1.1392 | 0.7366 | 1.7617 |
| B*51:01 | 41 | 0.0762 | 38 | 0.0892 | 0.48 | 0.9611 | 0.8423 | 0.5313 | 1.3355 |
| C*01:02 | 74 | 0.1381 | 56 | 0.1315 | 0.7768 | 0.9611 | 1.0583 | 0.7287 | 1.5369 |
| C*03:03 | 49 | 0.0914 | 40 | 0.0939 | 0.9112 | 0.9611 | 0.9709 | 0.6263 | 1.5053 |
| C*03:04 | 53 | 0.0989 | 32 | 0.0751 | 0.21 | 0.7592 | 1.3511 | 0.8542 | 2.137 |
| C*04:01 | 44 | 0.0821 | 23 | 0.054 | 0.098 | 0.5667 | 1.567 | 0.9305 | 2.6389 |
| C*06:02 | 54 | 0.1007 | 44 | 0.1033 | 0.9149 | 0.9611 | 0.9727 | 0.639 | 1.4805 |
| C*07:02 | 67 | 0.125 | 67 | 0.1573 | 0.1603 | 0.6813 | 0.7655 | 0.5311 | 1.1032 |
| C*14:02 | 29 | 0.0541 | 30 | 0.0704 | 0.3439 | 0.9335 | 0.755 | 0.4457 | 1.279 |
| DQB1*02:01 | 29 | 0.0539 | 21 | 0.0493 | 0.7722 | 0.9611 | 1.0988 | 0.6173 | 1.9558 |
| DQB1*02:02 | 46 | 0.0855 | 38 | 0.0892 | 0.9085 | 0.9611 | 0.9546 | 0.6088 | 1.4969 |
| DQB1*03:01 | 81 | 0.1506 | 82 | 0.1925 | 0.1 | 0.5667 | 0.7436 | 0.5306 | 1.042 |
| DQB1*03:02 | 51 | 0.0948 | 28 | 0.0657 | 0.1239 | 0.6018 | 1.4886 | 0.9214 | 2.4048 |
| DQB1*03:03 | 90 | 0.1673 | 68 | 0.1596 | 0.7929 | 0.9611 | 1.0576 | 0.7496 | 1.4922 |
| DQB1*05:01 | 34 | 0.0632 | 24 | 0.0563 | 0.6847 | 0.9611 | 1.13 | 0.6593 | 1.9366 |
| DQB1*05:02 | 46 | 0.0855 | 29 | 0.0681 | 0.335 | 0.9335 | 1.2799 | 0.7895 | 2.0751 |
| DQB1*05:03 | 31 | 0.0576 | 19 | 0.0446 | 0.3844 | 0.9335 | 1.3098 | 0.7291 | 2.3528 |
| DQB1*06:01 | 44 | 0.0818 | 33 | 0.0775 | 0.9049 | 0.9611 | 1.0607 | 0.6627 | 1.6978 |
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| DRB1*03:01 | 30 | 0.0558 | 21 | 0.0493 | 0.7723 | 0.9611 | 1.1389 | 0.6423 | 2.0194 |
| DRB1*07:01 | 57 | 0.1059 | 45 | 0.1056 | 1 | 1.0000 | 1.0033 | 0.6636 | 1.5169 |
| DRB1*08:03 | 41 | 0.0762 | 26 | 0.061 | 0.375 | 0.9335 | 1.2692 | 0.7631 | 2.1108 |
| DRB1*09:01 | 81 | 0.1506 | 62 | 0.1455 | 0.8556 | 0.9611 | 1.0406 | 0.7273 | 1.4889 |
| DRB1*12:02 | 29 | 0.0539 | 28 | 0.0657 | 0.4924 | 0.9611 | 0.8099 | 0.474 | 1.3836 |
| DRB1*15:01 | 42 | 0.0781 | 48 | 0.1127 | 0.0746 | 0.5667 | 0.6668 | 0.4315 | 1.0305 |
Abbreviations: CI, confidence interval; EBV, Epstein‐Barr virus; OR, odds ratio.
Frequencies of HLA‐A, ‐B, ‐C, ‐DRB1, and DQB1 alleles in the EBV‐seropositive and EBV‐seronegative groups
| EBV‐seropositive patients | EBV‐seronegative donors | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Allele frequency |
| % |
| % |
| Adjust | OR | OR | 95% CI |
| A*01 | 29 | 5.41% | 21 | 4.93% | 0.7718 | 1.0000 | 1.1031 | 0.6197 | 1.9635 |
| A*02 | 153 | 28.54% | 140 | 32.86% | 0.1586 | 0.7092 | 0.8161 | 0.6194 | 1.0751 |
| A*11 | 104 | 19.40% | 83 | 19.48% | 1 | 1.0000 | 0.9949 | 0.7214 | 1.372 |
| A*24 | 105 | 19.59% | 76 | 17.84% | 0.5074 | 1.0000 | 1.1219 | 0.8089 | 1.5561 |
| A*33 | 46 | 8.58% | 32 | 7.51% | 0.6346 | 1.0000 | 1.1559 | 0.7222 | 1.8499 |
| B*13 | 51 | 9.48% | 38 | 8.92% | 0.8231 | 1.0000 | 1.0693 | 0.6882 | 1.6614 |
| B*15 | 82 | 15.24% | 59 | 13.85% | 0.5824 | 1.0000 | 1.1186 | 0.779 | 1.6061 |
| B*35 | 31 | 5.76% | 23 | 5.40% | 0.8882 | 1.0000 | 1.0713 | 0.615 | 1.8663 |
| B*40 | 74 | 13.75% | 57 | 13.38% | 0.9247 | 1.0000 | 1.0324 | 0.7121 | 1.4969 |
| B*46 | 54 | 10.04% | 38 | 8.92% | 0.5826 | 1.0000 | 1.1392 | 0.7366 | 1.7617 |
| B*51 | 51 | 9.48% | 41 | 9.62% | 1 | 1.0000 | 0.9834 | 0.6382 | 1.5152 |
| C*01 | 79 | 14.74% | 58 | 13.62% | 0.6433 | 1.0000 | 1.0968 | 0.7609 | 1.581 |
| C*03 | 132 | 24.63% | 91 | 21.36% | 0.249 | 0.7092 | 1.2028 | 0.8877 | 1.6298 |
| C*04 | 50 | 9.33% | 30 | 7.04% | 0.2398 | 0.7092 | 1.358 | 0.8473 | 2.1765 |
| C*06 | 54 | 10.07% | 44 | 10.33% | 0.9149 | 1.0000 | 0.9727 | 0.639 | 1.4805 |
| C*07 | 81 | 15.11% | 78 | 18.31% | 0.1909 | 0.7092 | 0.7943 | 0.5649 | 1.1168 |
| C*08 | 36 | 6.72% | 33 | 7.75% | 0.6152 | 1.0000 | 0.8575 | 0.525 | 1.4003 |
| C*14 | 32 | 5.97% | 34 | 7.98% | 0.2483 | 0.7092 | 0.732 | 0.4438 | 1.2075 |
| C*15 | 31 | 5.78% | 24 | 5.63% | 1 | 1.0000 | 1.0282 | 0.594 | 1.78 |
| DQB1*02 | 75 | 13.94% | 59 | 13.85% | 1 | 1.0000 | 1.0076 | 0.6977 | 1.4552 |
| DQB1*03 | 226 | 42.01% | 180 | 42.25% | 0.9477 | 1.0000 | 0.99 | 0.7653 | 1.2806 |
| DQB1*04 | 30 | 5.58% | 27 | 6.34% | 0.6805 | 1.0000 | 0.8727 | 0.5105 | 1.4919 |
| DQB1*05 | 112 | 20.82% | 72 | 16.90% | 0.1375 | 0.7092 | 1.2926 | 0.9313 | 1.7943 |
| DQB1*06 | 95 | 17.66% | 88 | 20.66% | 0.2478 | 0.7092 | 0.8237 | 0.5965 | 1.1374 |
| DRB1*03 | 30 | 5.58% | 21 | 4.93% | 0.7723 | 1.0000 | 1.1389 | 0.6423 | 2.0194 |
| DRB1*04 | 80 | 14.87% | 52 | 12.21% | 0.2579 | 0.7092 | 1.2563 | 0.8635 | 1.8277 |
| DRB1*07 | 57 | 10.59% | 45 | 10.56% | 1 | 1.0000 | 1.0033 | 0.6636 | 1.5169 |
| DRB1*08 | 46 | 8.55% | 32 | 7.51% | 0.6346 | 1.0000 | 1.1512 | 0.7193 | 1.8423 |
| DRB1*09 | 81 | 15.06% | 62 | 14.55% | 0.8556 | 1.0000 | 1.0406 | 0.7273 | 1.4889 |
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| DRB1*12 | 37 | 6.88% | 42 | 9.86% | 0.0989 | 0.7092 | 0.6752 | 0.4256 | 1.0712 |
| DRB1*14 | 56 | 10.41% | 33 | 7.75% | 0.179 | 0.7092 | 1.3836 | 0.882 | 2.1706 |
| DRB1*15 | 53 | 9.85% | 56 | 13.15% | 0.1244 | 0.7092 | 0.722 | 0.4844 | 1.0763 |
Abbreviations: CI, confidence interval; EBV, Epstein‐Barr virus; OR, odds ratio.
Epstein‐Barr virus (EBV)‐infected cell types according to genotype subgroups
| EBV‐infected lymphocyte cell types | Group | |||
|---|---|---|---|---|
| No. (%) | Other genotype subgroups | HLA‐B*15:01 group | Total | |
| B cell |
| 22 | 0 | 22 |
| % | 27.50 | 0.00 | 20.56 | |
| T cell |
| 6 | 1 | 7 |
| % | 7.50 | 3.70 | 6.54 | |
| NK cells |
| 22 | 3 | 25 |
| % | 27.50 | 11.11 | 23.36 | |
| T/B cells |
| 0 | 1 | 1 |
| % | 0.00 | 3.70 | 0.93 | |
| NK/B cells |
| 1 | 4 | 5 |
| % | 1.25 | 14.81 | 4.67 | |
| NK/T cells |
| 6 | 5 | 11 |
| % | 7.50 | 18.52 | 10.28 | |
| Multiple |
| 23 | 13 | 36 |
| % | 28.75 | 48.15 | 33.64 | |
| Total |
| 80 | 27 | 107 |