Literature DB >> 35757048

Bayesian beta nonlinear models with constrained parameters to describe ruminal degradation kinetics.

Diego Salmerón1,2.   

Abstract

The models used to describe the kinetics of ruminal degradation are usually nonlinear models where the dependent variable is the proportion of degraded food. The method of least squares is the standard approach used to estimate the unknown parameters but this method can lead to unacceptable predictions. To solve this issue, a beta nonlinear model and the Bayesian perspective is proposed in this article. The application of standard methodologies to obtain prior distributions, such as the Jeffreys prior or the reference priors, involves serious difficulties here because this model is a nonlinear non-normal regression model, and the constrained parameters appear in the log-likelihood function through the Gamma function. This paper proposes an objective method to obtain the prior distribution, which can be applied to other models with similar complexity, can be easily implemented in OpenBUGS, and solves the problem of unacceptable predictions. The model is generalized to a larger class of models. The methodology was applied to real data with three models that were compared using the Deviance Information Criterion and the root mean square prediction error. A simulation study was performed to evaluate the coverage of the credible intervals.
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Entities:  

Keywords:  Bayesian analysis; MCMC; beta regression; default prior distributions; ruminal degradation kinetics

Year:  2021        PMID: 35757048      PMCID: PMC9225230          DOI: 10.1080/02664763.2021.1913105

Source DB:  PubMed          Journal:  J Appl Stat        ISSN: 0266-4763            Impact factor:   1.416


  7 in total

1.  Comparison of mathematical models to describe disappearance curves obtained using the polyester bag technique for incubating feeds in the rumen.

Authors:  S López; J France; M S Dhanoa; F Mould; J Dijkstra
Journal:  J Anim Sci       Date:  1999-07       Impact factor: 3.159

2.  Estimating the extent of degradation of ruminant feeds from a description of their gas production profiles observed in vitro: comparison of models.

Authors:  M S Dhanoa; S Lopez; J Dijkstra; D R Davies; R Sanderson; B A Williams; Z Sileshi; J France
Journal:  Br J Nutr       Date:  2000-02       Impact factor: 3.718

3.  Estimating the extent of degradation of ruminant feeds from a description of their gas production profiles observed in vitro: derivation of models and other mathematical considerations.

Authors:  J France; J Dijkstra; M S Dhanoa; S Lopez; A Bannink
Journal:  Br J Nutr       Date:  2000-02       Impact factor: 3.718

4.  Technical note: A proposed method to determine the extent of degradation of a feed in the rumen from the degradation profile obtained with the in vitro gas production technique using feces as the inoculum.

Authors:  M S Dhanoa; J France; L A Crompton; R M Mauricio; E Kebreab; J A N Mills; R Sanderson; J Dijkstra; S López
Journal:  J Anim Sci       Date:  2004-03       Impact factor: 3.159

5.  A compartmental model to analyze ruminal digestion.

Authors:  J Van Milgen; M R Murphy; L L Berger
Journal:  J Dairy Sci       Date:  1991-08       Impact factor: 4.034

6.  A non-linear compartmental model to describe forage degradation kinetics during incubation in polyester bags in the rumen.

Authors:  M S Dhanoa; J France; R C Siddons; S Lopez; J G Buchanan-Smith
Journal:  Br J Nutr       Date:  1995-01       Impact factor: 3.718

7.  Evaluation of models to describe ruminal degradation kinetics from in situ ruminal incubation of whole soybeans.

Authors:  M H Fathi Nasri; M Danesh Mesgaran; J France; J P Cant; E Kebreab
Journal:  J Dairy Sci       Date:  2006-08       Impact factor: 4.034

  7 in total

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