| Literature DB >> 35755076 |
Luiz Fernando Almeida Machado1,2, Luiz Ricardo Goulart Filho3, Fabiana Almeida Araújo Santos3, Leonardo Quintão Siravenha1, Andrea Nazaré Monteiro Rangel Silva2, Maria Alice Freitas Queiroz2, Antonio Carlos Rosário Vallinoto1,2, Marluísa Oliveira Guimarães Ishak2, Ricardo Ishak1,2.
Abstract
Human T-lymphotropic virus 1 (HTLV-1) is endemic worldwide and the infection results in severe diseases, including Adult T-cell Leukemia (ATL) and HTLV-1 associated myelopathy (HAM). There are some limitations of employing the present commercial serological assays for both diagnostic and epidemiological purposes in different geographical areas of the Brazil, such as the Amazon Region. Currently, methods for diagnosis are usually expensive to adapt for routine use. The aim of this work was to identify and characterize specific ligands to IgG that mimic HTLV-1 epitopes through the Phage Display technique, which could be used for diagnosis and as future vaccine candidates. Initially, IgG from 10 patients with HTLV-1 and 20 negative controls were covalently coupled to protein G-magnetic beads. After biopanning, genetic sequencing, bioinformatics analysis and Phage-ELISA were performed. The technique allowed the identification of 4 clones with HTLV-1 mimetic peptides, three aligned with gp46, A6 (SPYW), B6 (SQLP) and D7 (PLIL), and one with the protease and Tax, A8 (SPPR). Clones A6 and B6 showed higher values of accessibility, antigenicity and hydrophilicity. The reactivity of the clones evaluated by the Receiver Operating Characteristic (ROC) curve showed that the B6 clone had the highest Area Under Curve (0.83) and sensitivity and specificity values (both were 77.27 %; p < 0.001). The study showed that the Phage Display technique is effective for the identification of HTLV-1-related peptides. Clone B6 indicated to be a good marker for bioprospecting diagnostic test for HTLV-1 infection and could be used as a possible vaccine candidate for future studies.Entities:
Keywords: HTLV-1; bioprospection; immunoglobulin G; phage display; serology
Year: 2022 PMID: 35755076 PMCID: PMC9218527 DOI: 10.3389/fmed.2022.884738
Source DB: PubMed Journal: Front Med (Lausanne) ISSN: 2296-858X
Figure 1Immunoreactivities of peptides selected by phage display in the Phage-ELISA assay. Peptides that showed significantly higher absorbance when compared to the control (*) were tested against pool serum samples from individuals with HTLV-1 and the control group. WT: wild type phage (phage that does not express any exogenous protein).
Amino acid sequence of phage clones containing HTLV-1 mimetic peptides after selection by Phage Display.
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| A6 | AHWNPFWLATPF |
| A8 | YWVDSSAWVAHK |
| B6 | NNDPLQLRSQRY |
| D7 | KLDVFTKPLVFT |
Figure 2Phage-ELISA assay to test the immunoreactivity of the better-selected peptides against pooled sera from HTLV-1 reagent patients and controls HTLV-1 non-reagent. WT, wild type phage.
Clone reactivity when using individual sera from HTLV-1 carriers.
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| A6 | 72.73 (49.78–89.27%) | 72.73 (49.78–89.27%) | 0.78 | >0.109 | 0.069 | 2.7 | 0.4 |
| A8 | 68.18 (45.13–86.14%) | 72.73 (49.78–89.27%) | 0.79 | >0.076 | 0.066 | 2.3 | 0.4 |
| B6 | 77.27 (54.63–92.18%) | 77.27 (54.63–92.18%) | 0.83 | >0.092 | <0.001 | 3.4 | 0.3 |
| D7 | 68.18 (45.13–86.14%) | 68.18 (45.13–86.14%) | 0.69 | >0.097 | 0.299 | 2.1 | 0.5 |
AUC (Area Under Curve), LR (Likelihood Ratio).
Figure 3ROC curve of mimetic peptides with AUC values (Area Under Curve).
Figure 4Linear alignment of the amino acid sequences of the four peptides (A6, A8, B6, and D7) with the amino acid sequences of HTLV-1 from various regions of the world available in GenBank.
Accessibility, antigenicity and hydrophilicity values using the Emini, Kolaskar and Parker scales for the clones located in the envelope protein (gp46), protease and Tax.
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| 16–19 | PLIL | 0,364 | 1,176 | −1,029 | D7 | Env |
| 132–135 | SPYW | 2,732 | 1,084 | 0,743 | A6 | Env |
| 183–186 | SQLP | 2,366 | 1,054 | 2,929 | B6 | Env |
| 269–273 | LTLPF | 0,631 | 1,105 | −1,600 | A6 | Env |
| 28–31 | SPPR | 1,580 | 1,022 | 4,286 | A8 | Pro |
| 273–278 | SFIFHK | 0,470 | 1,068 | −0,800 | A8 | Tax |