| Literature DB >> 35746121 |
Ana Cecilia Villa-Parra1, Ismael Criollo1, Carlos Valadão2, Leticia Silva2, Yves Coelho2, Lucas Lampier2, Luara Rangel2, Garima Sharma3, Denis Delisle-Rodríguez2, John Calle-Siguencia1, Fernando Urgiles-Ortiz1, Camilo Díaz2, Eliete Caldeira2, Sridhar Krishnan3, Teodiano Bastos-Filho2.
Abstract
COVID-19 occurs due to infection through respiratory droplets containing the SARS-CoV-2 virus, which are released when someone sneezes, coughs, or talks. The gold-standard exam to detect the virus is Real-Time Polymerase Chain Reaction (RT-PCR); however, this is an expensive test and may require up to 3 days after infection for a reliable result, and if there is high demand, the labs could be overwhelmed, which can cause significant delays in providing results. Biomedical data (oxygen saturation level-SpO2, body temperature, heart rate, and cough) are acquired from individuals and are used to help infer infection by COVID-19, using machine learning algorithms. The goal of this study is to introduce the Integrated Portable Medical Assistant (IPMA), which is a multimodal piece of equipment that can collect biomedical data, such as oxygen saturation level, body temperature, heart rate, and cough sound, and helps infer the diagnosis of COVID-19 through machine learning algorithms. The IPMA has the capacity to store the biomedical data for continuous studies and can be used to infer other respiratory diseases. Quadratic kernel-free non-linear Support Vector Machine (QSVM) and Decision Tree (DT) were applied on three datasets with data of cough, speech, body temperature, heart rate, and SpO2, obtaining an Accuracy rate (ACC) and Area Under the Curve (AUC) of approximately up to 88.0% and 0.85, respectively, as well as an ACC up to 99% and AUC = 0.94, respectively, for COVID-19 infection inference. When applied to the data acquired with the IMPA, these algorithms achieved 100% accuracy. Regarding the easiness of using the equipment, 36 volunteers reported that the IPMA has a high usability, according to results from two metrics used for evaluation: System Usability Scale (SUS) and Post Study System Usability Questionnaire (PSSUQ), with scores of 85.5 and 1.41, respectively. In light of the worldwide needs for smart equipment to help fight the COVID-19 pandemic, this new equipment may help with the screening of COVID-19 through data collected from biomedical signals and cough sounds, as well as the use of machine learning algorithms.Entities:
Keywords: COVID-19; biomedical sensors; diagnosis; machine learning; respiratory diseases; telemedicine
Mesh:
Year: 2022 PMID: 35746121 PMCID: PMC9228002 DOI: 10.3390/s22124341
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.847
Figure 1Two versions of the IPMA used in this study. (a) Version A. (b) Version B.
Features of each version of the IPMA.
| Version A | Version B | |
|---|---|---|
| Size | 22 × 28.5 × 49.6 (cm | 30 × 70 × 70 (cm |
| Oximeter | Shenzen IMDK (C101A3) | Hunan Accurate Bio-Medical (FS10K) |
| Thermometer | Easy East (model IR200) | Bioland (E122) |
| Microphone | Knup (KP-911) | Knup (KP-911) |
| Disinfection | External UVC | Embedded UVC |
Figure 2Details of the experiments with the IPMA. In (a), an individual inserting his/her arm; in (b), the detail of the structure where the hand is placed to measure body temperature and oxygen saturation; in (c), a photo of the oximeter display. The upper number (right in the image) is the oxygen saturation, and the bottom number (left in the image) is the heart rate. There is a silicone cover on the power button to avoid the linear actuator damaging the oximeter.
Figure 3Version B with UV-C applied.
Figure 4Possible states of the oximeter display. (a) Complete reading procedure and points (in green) needed for the oximeter image alignment; (b) oximeter turned off; (c) incomplete reading procedure.
Figure 5Samples generated using image transformations.
Figure 6Processing steps for the oximeter display images. (a) The oximeter image taken by the camera; (b) the ANN output points marked in red; (c) the resulting warping procedure given the VGG16 points; (d) flipping the image to generate the final image.
Figure 7Diagram of the OCR recognition algorithm using the aligned image (the oximeter display in this example) to search for key pixels applying template matching and return the displayed value in text format.
Figure 8Block diagram of the machine learning algorithms used in this study. (a) Cough signal; (b) speech signal; (c) heart rate, body temperature, and SpO2.
Results from the CCS, CSS, and [17] datasets.
| CCS—Using QSVM | CSS—Using QSVM | [ | |
|---|---|---|---|
| ACC (%) | 87.98 | 70.32 | 98.62 |
| AUC | 0.85 | 0.66 | 0.94 |
Measurements and volunteers’ information taken during the IPMA’s evaluation by Ecuadorian volunteers.
| ID | Gender | Birth Date | COVID | Onset | Finish | SpO2 | HR | Temp | SBP | DBP |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | M | 06/29/97 | R (RT-PCR) | 08/18/21 | 08/21/21 | 98 | 93 | 36.4 | 45 | 81 |
| 2 | M | 07/19/99 | R (RT-PCR) | 08/09/21 | 08/23/21 | 94 | 76 | 36.2 | 63 | 110 |
| 3 | M | 11/26/71 | N (RT-PCR) |
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| 93 | 68 | 36.1 | 70 | 89 |
| 4 | F | 31/1/1999 | N (NS) |
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| 81 | 83 | 35.2 | 71 | 111 |
| 5 | M | 04/21/97 | R (RT-PCR) | 06/15/21 | 07/15/21 | 93 | 73 | 35.4 | 49 | 107 |
| 6 | M | 01/18/95 | R (RT-PCR) | 05/03/21 | 05/10/21 | 98 | 79 | 36.0 | 70 | 102 |
| 7 | M | 07/08/97 | R (RT-PCR) | 06/08/21 | 06/22/21 | 92 | 68 | 35.9 | 86 | 117 |
| 8 | F | 12/19/98 | R (RT-PCR) | 01/10/22 | 01/31/22 | 92 | 73 | 36.2 | 65 | 111 |
| 9 | F | 11/02/99 | N (NS) | - | - | 89 | 63 | 36.0 | 60 | 91 |
| 10 | M | 06/18/98 | N (NS) | - | - | 96 | 63 | 36.0 | 66 | 98 |
| 11 | M | 01/01/74 | N (NS) | - | - | 84 | 77 | 36.2 | 52 | 113 |
| 12 | M | 10/14/97 | N (NS) | - | - | 96 | 74 | 36.2 | 69 | 104 |
| 13 | F | 01/07/84 | N (NS) | - | - | 96 | 70 | 36.2 | 71 | 102 |
| 14 | M | 02/07/74 | N (NS) | 01/03/22 | 01/12/22 | 95 | 64 | 36.1 | 79 | 119 |
| 15 | M | 07/13/78 | N (NS) | - | - | 99 | 75 | 36.1 | 83 | 117 |
| 16 | F | 01/06/03 | R (RT-PCR) | - | - | 94 | 86 | 35.9 | 46 | 85 |
| 17 | M | 07/06/02 | N (NS) | - | - | 98 | 88 | 36.1 | 43 | 108 |
| 18 | M | 12/16/03 | N (NS) | - | - | 91 | 76 | 36.3 | 60 | 114 |
| Avg | - | - | - | - | - | 93.28 | 74.94 | 36.03 | 63.78 | 104.39 |
Measurements and volunteers’ information taken during the IPMA’s evaluation by Brazilian volunteers.
| ID | Gender | Birth Date | COVID | Onset | Finish | SpO2 | HR | Temp | SBP | DBP |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | F | 01/07/1984 | N (QT) | - | - | 98 | 72 | 36.8 | 98 | 66 |
| 2 | F | 04/09/1993 | R (PE) | 27/12/2020 | 04/01/2021 | 97 | 98 | 36.3 | 116 | 79 |
| 3 | M | 05/29/1989 | R (PE) | 27/12/2020 | 04/01/2021 | 98 | 73 | 36.5 | 120 | 71 |
| 4 | F | 07/19/1985 | N (NS) | - | - | 97 | 76 | 36.9 | 132 | 81 |
| 5 | F | 08/09/1981 | N (NS) | - | - | 98 | 67 | 36.5 | 131 | 81 |
| 6 | M | 06/04/1973 | N (RT-PCR) | - | - | 97 | 68 | 36.5 | 106 | 71 |
| 7 | F | 09/29/1994 | N (NS) | - | - | 98 | 78 | 36.3 | 119 | 69 |
| 8 | F | 05/14/1998 | N (NS) | - | - | 98 | 82 | 36.7 | 112 | 74 |
| 9 | F | 12/01/1994 | N (ME) | - | - | 99 | 94 | 36.4 | 118 | 63 |
| 10 | F | 05/23/1974 | N (RT-PCR) | - | - | 98 | 74 | 36.6 | 115 | 105 |
| 11 | F | 01/26/1971 | N (ME) | - | - | 96 | 91 | 36.2 | 114 | 52 |
| 12 | F | 11/11/1991 | N (ME) | - | - | 98 | 89 | 36.3 | 110 | 58 |
| 13 | F | 01/14/1989 | N (NS) | - | - | 99 | 101 | 36.3 | 143 | 95 |
| 14 | M | 12/15/1989 | N (RT-PCR) | - | - | 96 | 63 | 36.3 | 96 | 49 |
| 15 | M | 10/04/1991 | N (NS) | - | - | 95 | 86 | 36.1 | 117 | 70 |
| 16 | F | 07/09/1989 | N (NS) | - | - | 97 | 104 | 36.3 | 135 | 97 |
| 17 | M | 09/12/1981 | N (ME) | - | - | 97 | 71 | 36.4 | 137 | 80 |
| 18 | M | 06/29/1965 | N (RT-PCR) | - | - | 95 | 69 | 36.4 | 125 | 83 |
| Avg | - | - | - | - | - | 97.28 | 80.89 | 36.43 | 119.11 | 74.67 |
SUS results for Ecuadorian volunteers.
| Questions | |||||||||||
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| 1 | 3 | 2 | 2 | 4 | 2 | 4 | 1 | 4 | 3 | 3 | 65.00 |
| 2 | 3 | 5 | 1 | 4 | 1 | 4 | 1 | 5 | 1 | 5 | 90.00 |
| 3 | 2 | 2 | 1 | 5 | 2 | 5 | 2 | 5 | 1 | 1 | 75.00 |
| 4 | 2 | 4 | 1 | 2 | 1 | 4 | 1 | 5 | 2 | 5 | 82.50 |
| 5 | 3 | 3 | 1 | 5 | 1 | 5 | 1 | 5 | 5 | 5 | 80.00 |
| 6 | 5 | 3 | 1 | 2 | 3 | 2 | 3 | 2 | 1 | 3 | 47.50 |
| 7 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 4 | 97.50 |
| 8 | 1 | 4 | 1 | 5 | 1 | 3 | 1 | 5 | 1 | 1 | 82.50 |
| 9 | 1 | 5 | 1 | 4 | 1 | 4 | 1 | 5 | 1 | 4 | 92.50 |
| 10 | 2 | 4 | 1 | 1 | 2 | 4 | 1 | 5 | 1 | 1 | 70.00 |
| 11 | 1 | 4 | 1 | 5 | 1 | 4 | 1 | 5 | 1 | 5 | 95.00 |
| 12 | 5 | 5 | 1 | 1 | 1 | 3 | 1 | 5 | 4 | 3 | 62.50 |
| 13 | 5 | 1 | 1 | 5 | 1 | 4 | 1 | 5 | 1 | 5 | 77.50 |
| 14 | 2 | 5 | 1 | 1 | 1 | 4 | 1 | 5 | 1 | 5 | 85.00 |
| 15 | 1 | 4 | 1 | 3 | 1 | 4 | 1 | 5 | 1 | 4 | 87.50 |
| 16 | 3 | 4 | 1 | 2 | 3 | 4 | 2 | 5 | 1 | 3 | 70.00 |
| 17 | 3 | 5 | 1 | 5 | 2 | 4 | 2 | 5 | 1 | 5 | 87.50 |
| 18 | 2 | 4 | 2 | 2 | 4 | 2 | 2 | 5 | 1 | 2 | 60.00 |
| Avg | 2.50 | 3.83 | 1.11 | 3.39 | 1.61 | 3.83 | 1.33 | 4.78 | 1.56 | 3.56 | 78.19 |
SUS results for Brazilian volunteers.
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| 1 | 4 | 2 | 5 | 3 | 4 | 1 | 5 | 1 | 4 | 1 | 85.00 |
| 2 | 4 | 2 | 4 | 4 | 4 | 1 | 3 | 1 | 4 | 4 | 67.50 |
| 3 | 5 | 2 | 5 | 4 | 5 | 1 | 5 | 1 | 5 | 2 | 87.50 |
| 4 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 100.00 |
| 5 | 5 | 1 | 5 | 2 | 4 | 2 | 5 | 1 | 5 | 1 | 92.50 |
| 6 | 5 | 1 | 5 | 1 | 4 | 1 | 5 | 1 | 4 | 1 | 95.00 |
| 7 | 5 | 1 | 5 | 5 | 5 | 1 | 4 | 1 | 5 | 1 | 87.50 |
| 8 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 100.00 |
| 9 | 5 | 1 | 5 | 4 | 3 | 3 | 4 | 3 | 5 | 1 | 75.00 |
| 10 | 3 | 1 | 5 | 5 | 3 | 2 | 5 | 2 | 3 | 3 | 65.00 |
| 11 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 100.00 |
| 12 | 5 | 2 | 3 | 1 | 4 | 2 | 2 | 2 | 3 | 1 | 72.50 |
| 13 | 3 | 2 | 4 | 2 | 5 | 1 | 5 | 1 | 4 | 1 | 85.00 |
| 14 | 3 | 2 | 4 | 4 | 3 | 4 | 4 | 4 | 3 | 1 | 55.00 |
| 15 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 100.00 |
| 16 | 3 | 3 | 4 | 5 | 3 | 1 | 2 | 3 | 3 | 2 | 52.50 |
| 17 | 2 | 2 | 3 | 4 | 2 | 4 | 4 | 5 | 2 | 2 | 40.00 |
| 18 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 5 | 1 | 100.00 |
| Avg | 4.30 | 1.50 | 4.60 | 2.70 | 4.10 | 1.60 | 4.30 | 1.70 | 4.20 | 1.40 | 81.11 |
PSSUQ results for the Ecuadorian volunteers.
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| 1 | 2 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | 4 | 3 | 2 | 3 | 1 | 2 | 2 | 1 | 1.7 | 2.8 | 1.7 | 2.0 |
| 2 | 1 | 1 | 2 | 3 | 2 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1.8 | 1.4 | 1.0 | 1.5 |
| 3 | 1 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1.5 | 1.8 | 1.0 | 1.4 |
| 4 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1.3 | 1.6 | 1.0 | 1.4 |
| 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.0 | 1.0 | 1.0 |
| 6 | 4 | 2 | 3 | 4 | 3 | 1 | 2 | 2 | 3 | 3 | 4 | 4 | 3 | 4 | 5 | 5 | 2.8 | 3.2 | 4.0 | 3.3 |
| 7 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.2 | 2.0 | 1.0 | 1.4 |
| 8 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.4 | 1.0 | 1.1 |
| 9 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 2.0 | 1.0 | 1.3 |
| 10 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.0 | 1.0 | 1.0 |
| 11 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1.2 | 1.2 | 1.3 | 1.3 |
| 12 | 5 | 2 | 7 | 3 | 3 | 2 | 1 | 3 | 3 | 3 | 1 | 1 | 3 | 3 | 1 | 2 | 3.7 | 2.2 | 2.3 | 2.7 |
| 13 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 6 | 4 | 1 | 1 | 1 | 4 | 1 | 1 | 1.0 | 2.6 | 2.0 | 1.7 |
| 14 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1.2 | 1.0 | 1.0 | 1.1 |
| 15 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1.0 | 1.4 | 1.0 | 1.1 |
| 16 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 4 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 1.2 | 1.8 | 1.7 | 1.6 |
| 17 | 1 | 2 | 2 | 3 | 1 | 1 | 1 | 4 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1.7 | 2.0 | 1.0 | 1.6 |
| 18 | 1 | 1 | 1 | 2 | 2 | 3 | 3 | 2 | 2 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 1.7 | 1.8 | 1.3 | 1.7 |
| Avg | 1.4 | 1.3 | 1.7 | 1.9 | 1.7 | 1.7 | 1.6 | 2.1 | 3.1 | 2.1 | 1.8 | 2.1 | 2.0 | 2.2 | 2.1 | 2.3 | 1.5 | 1.8 | 1.4 | 1.6 |
PSSUQ results for the Brazilian volunteers.
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| 19 | 2 | 1 | 3 | 3 | 3 | 2 | 3 | 3 | 4 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 2.3 | 2.5 | 1.0 | 2.2 |
| 20 | 3 | 3 | 3 | 4 | 2 | 2 | 2 | 2 | 7 | 6 | 2 | 2 | 2 | 3 | 2 | 1 | 2.8 | 3.5 | 2.3 | 2.9 |
| 21 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.5 | 1.0 | 1.2 |
| 22 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1.2 | 1.0 | 1.7 | 1.2 |
| 23 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1.2 | 2.0 | 1.7 | 1.6 |
| 24 | 2 | 2 | 2 | 1 | 2 | 4 | 1 | 1 | 3 | 3 | 3 | 2 | 2 | 2 | 2 | 3 | 2.2 | 2.2 | 2.0 | 2.2 |
| 25 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 1.2 | 2.2 | 1.3 | 1.6 |
| 26 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.0 | 1.0 | 1.0 |
| 27 | 3 | 1 | 2 | 1 | 1 | 1 | 4 | 4 | 7 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 1.5 | 3.8 | 1.0 | 2.3 |
| 28 | 2 | 1 | 2 | 2 | 4 | 2 | 1 | 2 | 6 | 4 | 3 | 2 | 2 | 3 | 2 | 4 | 2.2 | 3.0 | 2.3 | 2.6 |
| 29 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 1.0 | 1.0 | 1.0 |
| 30 | 6 | 3 | 3 | 3 | 5 | 6 | 4 | 6 | 7 | 7 | 3 | 4 | 3 | 2 | 3 | 7 | 4.3 | 5.2 | 2.7 | 4.5 |
| 31 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 4 | 4 | 1 | 1 | 1 | 2 | 1 | 1.0 | 2.5 | 1.3 | 1.6 |
| 32 | 3 | 4 | 3 | 4 | 4 | 4 | 4 | 3 | 5 | 4 | 5 | 5 | 5 | 4 | 4 | 4 | 3.7 | 4.3 | 4.3 | 4.1 |
| 33 | 2 | 2 | 4 | 4 | 4 | 2 | 2 | 4 | 4 | 4 | 4 | 4 | 2 | 2 | 2 | 2 | 3.0 | 3.7 | 2.0 | 3.0 |
| 34 | 4 | 4 | 4 | 5 | 6 | 4 | 4 | 4 | 6 | 6 | 3 | 3 | 2 | 4 | 3 | 3 | 4.5 | 4.3 | 3.0 | 4.1 |
| 35 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1.0 | 2.0 | 1.0 | 1.4 |
| 36 | 4 | 5 | 5 | 4 | 4 | 5 | 5 | 4 | 5 | 4 | 5 | 4 | 5 | 5 | 5 | 4 | 4.5 | 4.5 | 5.0 | 4.6 |
| Avg | 2.2 | 2.0 | 2.2 | 2.2 | 2.4 | 2.2 | 2.2 | 2.3 | 4.3 | 3.3 | 2.4 | 2.1 | 1.9 | 2.1 | 1.9 | 2.2 | 2.2 | 2.8 | 2.0 | 2.4 |