Literature DB >> 35739424

Evaluation of classifications of the monopodial bronchopulmonary vasculature using clustering methods.

Jonas Labode1,2, Christian Dullin3,4,5, Willi L Wagner4,5, Despoina Myti5,6,7, Rory E Morty5,6,7, Christian Mühlfeld8,9.   

Abstract

Mammalian pulmonary arteries divide multiple times before reaching the vast capillary network of the alveoli. Morphological analyses of the arterial branches can be challenging because more proximal branches are likely biologically distinct from more peripheral parts. Thus, it is useful to group the arterial branches into groups of coherent biology. While the generational approach of dichotomous branching is straightforward, the grouping of arterial branches in the asymmetrically branching monopodial lung is less clear. Several established classification methods return highly dissimilar groupings when employed on the same organ. Here, we established a workflow allowing the quantification of grouping results for the monopodial lung and tested various methods to group the branches of the arterial tree into coherent groups. A mouse lung was imaged by synchrotron x-ray microcomputed tomography, and the arteries were digitally segmented. The arterial tree was divided into its individual segments, morphological properties were assessed from corresponding light microscopic scans, and different grouping methods were employed, such as (fractal) generation or (Strahler) order. The results were ranked by the morphological similarity within and dissimilarity between the resulting groups. Additionally, a method from the mathematical field of cluster analysis was employed for creating a reference classification. In conclusion, there were significant differences in method performance. The Strahler order was significantly superior to the generation system commonly used to classify human lung structure. Furthermore, a clustering approach indicated more precise ways to classify the monopodial lung vasculature exist.
© 2022. The Author(s).

Entities:  

Keywords:  3D reconstruction; Branching analysis; Cluster analysis; Monopodial lung; Pulmonary vasculature; Synchrotron micro-CT

Year:  2022        PMID: 35739424     DOI: 10.1007/s00418-022-02116-x

Source DB:  PubMed          Journal:  Histochem Cell Biol        ISSN: 0948-6143            Impact factor:   4.304


  17 in total

1.  Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object.

Authors:  D Paganin; S C Mayo; T E Gureyev; P R Miller; S W Wilkins
Journal:  J Microsc       Date:  2002-04       Impact factor: 1.758

2.  Capillary Changes Precede Disordered Alveolarization in a Mouse Model of Bronchopulmonary Dysplasia.

Authors:  Svenja V Appuhn; Sara Siebert; Despoina Myti; Christoph Wrede; David E Surate Solaligue; David Pérez-Bravo; Christina Brandenberger; Julia Schipke; Rory E Morty; Roman Grothausmann; Christian Mühlfeld
Journal:  Am J Respir Cell Mol Biol       Date:  2021-07       Impact factor: 6.914

3.  Digital 3D reconstructions using histological serial sections of lung tissue including the alveolar capillary network.

Authors:  Roman Grothausmann; Lars Knudsen; Matthias Ochs; Christian Mühlfeld
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2016-12-02       Impact factor: 5.464

4.  Axial pathways compared with complete data in morphological studies of the lung.

Authors:  K Horsfield
Journal:  Respir Physiol       Date:  1984-03

5.  An asymmetrical model of the airways of the dog lung.

Authors:  K Horsfield; W Kemp; S Phillips
Journal:  J Appl Physiol Respir Environ Exerc Physiol       Date:  1982-01

6.  Diameter-defined Strahler system and connectivity matrix of the pulmonary arterial tree.

Authors:  Z L Jiang; G S Kassab; Y C Fung
Journal:  J Appl Physiol (1985)       Date:  1994-02

7.  Morphometry of the small pulmonary arteries in man.

Authors:  K Horsfield
Journal:  Circ Res       Date:  1978-05       Impact factor: 17.367

8.  Standardisation of oxygen exposure in the development of mouse models for bronchopulmonary dysplasia.

Authors:  Claudio Nardiello; Ivana Mižíková; Diogo M Silva; Jordi Ruiz-Camp; Konstantin Mayer; István Vadász; Susanne Herold; Werner Seeger; Rory E Morty
Journal:  Dis Model Mech       Date:  2016-12-14       Impact factor: 5.758

9.  Combination of µCT and light microscopy for generation-specific stereological analysis of pulmonary arterial branches: a proof-of-concept study.

Authors:  Roman Grothausmann; Jonas Labode; Pablo Hernandez-Cerdan; David Haberthür; Ruslan Hlushchuk; Oleg Lobachev; Christina Brandenberger; Andre George Gie; Thomas Salaets; Jaan Toelen; Willi L Wagner; Christian Mühlfeld
Journal:  Histochem Cell Biol       Date:  2020-12-02       Impact factor: 4.304

Review 10.  Stereology and three-dimensional reconstructions to analyze the pulmonary vasculature.

Authors:  Christian Mühlfeld
Journal:  Histochem Cell Biol       Date:  2021-07-16       Impact factor: 4.304

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