Literature DB >> 35738299

Omicron subvariants escape antibodies elicited by vaccination and BA.2.2 infection.

Lin Yao1, Ka-Li Zhu1, Xiao-Lin Jiang2, Xue-Jun Wang3, Bing-Dong Zhan4, Hui-Xia Gao5, Xing-Yi Geng6, Li-Jun Duan3, Er-Hei Dai5, Mai-Juan Ma7.   

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Year:  2022        PMID: 35738299      PMCID: PMC9212811          DOI: 10.1016/S1473-3099(22)00410-8

Source DB:  PubMed          Journal:  Lancet Infect Dis        ISSN: 1473-3099            Impact factor:   71.421


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The BA.1, BA.2, and BA.3 omicron subvariants of SARS-CoV-2 showed similar but substantial resistance to vaccine-induced and infection-induced serum neutralising activity.1, 2 The new BA.2.12.1, BA.2.13, BA.4, and BA.5 omicron subvariants containing Leu452 substitutions show more infectious potential than BA.2. We examined neutralising activity against the BA.1, BA.2, BA.2.11, BA.2.12.1, BA.2.13, BA.4, and BA.5 omicron subvariants in serum from people who received BBIBP-CorV (Sinopharm) primary immunisation, people who received BBIBP-CorV or ZF2001 (Anhui Zhifei Longcom) boosters, and people with omicron breakthrough infections (appendix pp 4, 7). 25 individuals received two doses of BBIBP-CorV. Using an in-house pseudovirus neutralisation assay we found that two BBIBP-CorV doses induced detectable neutralising antibodies against spike protein mutation D614G in 21 (84%) individuals, but neutralising activity against omicron subvariants (BA.1, BA.2, BA.2.11, BA.2.12.1, BA.2.13, and BA.4/BA.5) was not or only minimally detectable (appendix pp 2–3, 8). Geometric mean titres (GMTs) of neutralising antibodies against D614G in the 25 individuals who received a BBIBP-CorV booster were 3·1-times higher than in people who received two doses of BBIBP-CorV; the 30 people who received a ZF2001 booster had a 2·9-times higher GMT than individuals who received two doses of BBIBP-CorV (appendix pp 2–3, 8). Neutralising activity against omicron subvariants was observed in 24–48% of people who received a BBIBP-CorV booster and 30–53% of people who received a ZF2001 booster (appendix pp 2–3, 9). Moreover, serum samples with neutralising antibody titres higher than the limit of detection (limit of detection was 30) against the omicron subvariants had lower neutralising activity, with a 4·6–17·1-times lower GMT than the GMT against D614G (appendix pp 2–3). The BA.2.12.1 subvariant showed significantly more resistance than the BA.2 subvariant to a BBIBP-CorV booster (appendix p 9), and the BA.2.11, BA.2.12.1, and BA.2.13 subvariants showed significantly more resistance than the BA.2 subvariant to a ZF2001 booster (appendix p 9). The serum neutralising antibody titres against all tested pseudoviruses did not differ between people who received a BBIBP-CorV booster and those who received a ZF2001 booster (appendix pp 8–9). 18 people had BA.1 breakthrough infection and 15 people had BA.2.2 breakthrough infection (appendix pp 2–3, 7). People with BA.1 breakthrough infection had neutralising titres against omicron subvariants similar to neutralising titres against D614G except for BA.4/BA.5, which had a 2·8-times lower titre compared with D614G-mutated variants (appendix pp 2–3). Antibody titres against omicron subvariants BA.2, BA.2.11, BA.2.12.1, BA.2.13, and BA.4/BA.5 were similar to antibody titres against BA.1 (appendix pp 2–3). Additionally, neutralising antibodies against omicron subvariants above the limit of detection accounted for 88–100% of infections. By contrast, BA.2.2 breakthrough infections had small increases in GMTs against BA.1 compared with BA.1 breakthrough infections (appendix p 10), and neutralising titres against all omicron subvariants, except BA.2, were significantly decreased (3·5–7·4 times) compared with the titres against D614G (appendix pp 2–3). BA.2.2 breakthrough infection resulted in 73–87% of individuals having neutralising antibodies against omicron subvariants higher than the limit of detection (appendix pp 2–3), but neutralising antibody titres against BA.2 were significantly higher than other omicron subvariants (appendix pp 2–3). People with BA.1 breakthrough infections had significantly higher neutralising antibody titres against the BA.1 and BA.2.13 subvariants than people with BA.2.2 breakthrough infections (appendix p 10). Of note, compared with the people with a BA.1 breakthrough infection, people with BA.2.2 breakthrough infections included a substantially higher number of individuals who were triple vaccinated (appendix p 7). Completion of the primary BBIBP-CorV vaccination schedule induces neutralising antibodies in most individuals against SARS-CoV-2 variants with a D614G mutation, which is consistent with previous studies.4, 5, 6 However, the spike protein mutation enables the escape of omicron subvariants from neutralisation, which can be partly restored by a booster vaccination. Breakthrough omicron infections enhance sera neutralising potential specifically against the omicron subvariants, which is consistent with two recent studies.7, 8 Together, our results indicate that the new SARS-CoV-2 subvariants (eg, BA.2.12.1 and BA.4 and BA.5) could cause a new wave of infections. We declare no competing interests. LY, K-LZ, X-LJ, X-JW, and B-DZ contributed equally.
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Authors:  Prerna Arora; Lu Zhang; Nadine Krüger; Cheila Rocha; Anzhalika Sidarovich; Sebastian Schulz; Amy Kempf; Luise Graichen; Anna-Sophie Moldenhauer; Anne Cossmann; Alexandra Dopfer-Jablonka; Georg M N Behrens; Hans-Martin Jäck; Stefan Pöhlmann; Markus Hoffmann
Journal:  Cell Host Microbe       Date:  2022-05-06       Impact factor: 31.316

2.  Differential Antibody Response to Inactivated COVID-19 Vaccines in Healthy Subjects.

Authors:  Jiaqi Zhang; Shan Xing; Dan Liang; Wei Hu; Changwen Ke; Jinyong He; Runyu Yuan; Yile Huang; Yizhe Li; Dongdong Liu; Xuedong Zhang; Lin Li; Jianhua Lin; Weili Li; Xiangyun Teng; Yijun Liu; Wei Wen; Qiang Kang; Dawei Wang; Wanli Liu; Jianhua Xu
Journal:  Front Cell Infect Microbiol       Date:  2021-12-16       Impact factor: 5.293

3.  Immunogenicity induced by the use of alternative vaccine platforms to deal with vaccine shortages in a low- to middle-income country: Results of two randomized clinical trials.

Authors:  Alejandro Macchia; Daniel Ferrante; María Belén Bouzas; Patricia Angeleri; Cristián Biscayart; Jorge Geffner; Lilia Mammana; Inés Zapiola; Eduardo Luis López; Angela Gentile; Augusto Varese; Ignacio Mazzitelli; Facundo Di Diego García; Deborah Sharff; Verónica Lucconi; Paula Sujansky; Javier Mariani; Fernán González Bernaldo de Quirós
Journal:  Lancet Reg Health Am       Date:  2022-02-02

4.  Neutralizing activity of BBIBP-CorV vaccine-elicited sera against Beta, Delta and other SARS-CoV-2 variants of concern.

Authors:  Xiaoqi Yu; Dong Wei; Wenxin Xu; Chuanmiao Liu; Wentian Guo; Xinxin Li; Wei Tan; Leshan Liu; Xinxin Zhang; Jieming Qu; Zhitao Yang; Erzhen Chen
Journal:  Nat Commun       Date:  2022-04-04       Impact factor: 14.919

5.  Neutralization of SARS-CoV-2 Omicron sub-lineages BA.1, BA.1.1, and BA.2.

Authors:  John P Evans; Cong Zeng; Panke Qu; Julia Faraone; Yi-Min Zheng; Claire Carlin; Joseph S Bednash; Tongqing Zhou; Gerard Lozanski; Rama Mallampalli; Linda J Saif; Eugene M Oltz; Peter J Mohler; Kai Xu; Richard J Gumina; Shan-Lu Liu
Journal:  Cell Host Microbe       Date:  2022-04-25       Impact factor: 31.316

6.  BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.

Authors:  Yunlong Cao; Ayijiang Yisimayi; Fanchong Jian; Weiliang Song; Tianhe Xiao; Lei Wang; Shuo Du; Jing Wang; Qianqian Li; Xiaosu Chen; Yuanling Yu; Peng Wang; Zhiying Zhang; Pulan Liu; Ran An; Xiaohua Hao; Yao Wang; Jing Wang; Rui Feng; Haiyan Sun; Lijuan Zhao; Wen Zhang; Dong Zhao; Jiang Zheng; Lingling Yu; Can Li; Na Zhang; Rui Wang; Xiao Niu; Sijie Yang; Xuetao Song; Yangyang Chai; Ye Hu; Yansong Shi; Linlin Zheng; Zhiqiang Li; Qingqing Gu; Fei Shao; Weijin Huang; Ronghua Jin; Zhongyang Shen; Youchun Wang; Xiangxi Wang; Junyu Xiao; Xiaoliang Sunney Xie
Journal:  Nature       Date:  2022-06-17       Impact factor: 69.504

7.  Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection.

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Journal:  Nat Commun       Date:  2022-08-10       Impact factor: 17.694

8.  CoV-Spectrum: Analysis of Globally Shared SARS-CoV-2 Data to Identify and Characterize New Variants.

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Journal:  Bioinformatics       Date:  2021-12-25       Impact factor: 6.937

  8 in total
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1.  COVID-19 vaccination and BA.1 breakthrough infection induce neutralising antibodies which are less efficient against BA.4 and BA.5 Omicron variants, Israel, March to June 2022.

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Journal:  Euro Surveill       Date:  2022-07

Review 2.  Omicron variant (B.1.1.529) and its sublineages: What do we know so far amid the emergence of recombinant variants of SARS-CoV-2?

Authors:  Manish Dhawan; AbdulRahman A Saied; Saikat Mitra; Fahad A Alhumaydhi; Talha Bin Emran; Polrat Wilairatana
Journal:  Biomed Pharmacother       Date:  2022-08-15       Impact factor: 7.419

3.  Differential proinflammatory activities of Spike proteins of SARS-CoV-2 variants of concern.

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Journal:  Sci Adv       Date:  2022-09-16       Impact factor: 14.957

4.  Functional immune responses against SARS-CoV-2 variants of concern after fourth COVID-19 vaccine dose or infection in patients with blood cancer.

Authors:  Annika Fendler; Scott T C Shepherd; Lewis Au; Mary Wu; Ruth Harvey; Katalin A Wilkinson; Andreas M Schmitt; Zayd Tippu; Benjamin Shum; Sheima Farag; Aljosja Rogiers; Eleanor Carlyle; Kim Edmonds; Lyra Del Rosario; Karla Lingard; Mary Mangwende; Lucy Holt; Hamid Ahmod; Justine Korteweg; Tara Foley; Taja Barber; Andrea Emslie-Henry; Niamh Caulfield-Lynch; Fiona Byrne; Daqi Deng; Svend Kjaer; Ok-Ryul Song; Christophe J Queval; Caitlin Kavanagh; Emma C Wall; Edward J Carr; Simon Caidan; Mike Gavrielides; James I MacRae; Gavin Kelly; Kema Peat; Denise Kelly; Aida Murra; Kayleigh Kelly; Molly O'Flaherty; Robyn L Shea; Gail Gardner; Darren Murray; Sanjay Popat; Nadia Yousaf; Shaman Jhanji; Kate Tatham; David Cunningham; Nicholas Van As; Kate Young; Andrew J S Furness; Lisa Pickering; Rupert Beale; Charles Swanton; Sonia Gandhi; Steve Gamblin; David L V Bauer; George Kassiotis; Michael Howell; Emma Nicholson; Susanna Walker; Robert J Wilkinson; James Larkin; Samra Turajlic
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