| Literature DB >> 35729656 |
Zhenlan Feng1, Qinshu Xu2, Xiang He2, Yuedong Wang1, Lan Fang3, Jianpeng Zhao3, Ying Cheng3, Cong Liu3, Jicong Du4, Jianming Cai5,6.
Abstract
BACKGROUND: Severe ionizing radiation (IR)-induced intestinal injury associates with high mortality, which is a worldwide problem requiring urgent attention. In recent years, studies have found that the PHD-HIF signaling pathway may play key roles in IR-induced intestinal injury, and we found that FG-4592, the PHD inhibitor, has significant radioprotective effects on IR-induced intestinal injury.Entities:
Keywords: FG-4592; Intestinal stem cell; Intestine injury; Radiation; TLR4
Mesh:
Substances:
Year: 2022 PMID: 35729656 PMCID: PMC9210818 DOI: 10.1186/s13287-022-02945-6
Source DB: PubMed Journal: Stem Cell Res Ther ISSN: 1757-6512 Impact factor: 8.079
qRT-PCR primers for the eight genes evaluated
| Gene symbol | Forward | Reverse |
|---|---|---|
| TLR4 | AAATGCACTGAGCTTTAGTGGT | TGGCACTCATAATGATGGCAC |
| IL-6 | CTGCAAGAGACTTCCATCCAG | AGTGGTATAGACAGGTCTGTTGG |
| IGFBP2 | CAGACGCTACGCTGCTATCC | CCCTCAGAGTGGTCGTCATCA |
| SOX2 | GCGGAGTGGAAACTTTTGTCC | CGGGAAGCGTGTACTTATCCTT |
| REG2 | CTGATGTTCCTGTCATACAGCC | CCAGGTCAAACGGTCTTCAATTA |
| REG3B | ACTCCCTGAAGAATATACCCTCC | CGCTATTGAGCACAGATACGAG |
| REG3D | GACTCCATGATCTGTCACTTGG | CATAGGGAAATGTTGGGTCACAA |
| HK1 | CAAGAAATTACCCGTGGGATTCA | CAATGTTAGCGTCATAGTCCCC |
Fig. 1FG-4592 exhibited a significant radioprotective effect in vivo and in vitro. A The survival of mice after total body irradiation of 8.5 Gy. B The survival of mice after local abdominal irradiation of 25.0 Gy. C Effects of different concentrations of FG-4592 on MODE-K cell viability was measured by the CCK-8 assay. D HIEC cell apoptosis was detected by flow cytometry. E Expression of HIEC cell apoptosis pathway-related proteins. The data were presented as mean ± SD. *P < 0.05, **P < 0.01, and ***P < 0.001 for control versus FG-4592 treatment
Fig. 2FG-4592 protected the intestinal tissue against radiation-induced injury. C57BL/6 mice were pre-treated with PBS or FG-4592 before 8.5 Gy TBI. A Representative images of HE-stained intestinal sections with the indicated treatment at 3.5 d after TBI. B The representative images of Ki67-stained intestinal sections with the indicated treatment at 3.5 d after TBI. C The representative images of TUNEL-stained intestinal sections with the indicated treatment at 3.5 d after TBI. D The representative images of Lgr5+ FISH intestinal sections with the indicated treatment at 3.5 d after TBI. The data were presented as mean ± SD. *P < 0.05, **P < 0.01 and ***P < 0.001 for control versus FG-4592 treatment
Fig. 3FG-4592 protected the intestinal organoid against radiation-induced injury. A Organoid regeneration after IR with PBS and FG-4592 treatment. B Representative images of HE-stained intestinal organoids with the indicated treatment after IR. C Representative images of TUNEL-stained intestinal organoids with the indicated treatment after IR. D The expression of the OLFM4 receptor was detected by fluorescence microscopy. The data were presented as mean ± SD. *P < 0.05, **P < 0.01, and ***P < 0.001 for control versus FG-4592 treatment
Fig. 4Identification of DEGs after FG-4592 treatment. A Scatter plot of differently expressed genes in gut tissue after FG-4592 treatment. Each dot stands for a gene. Red and green color dots indicate an increase or decrease, respectively. B Heat map of differential genes expression between wild-type mice and FG-4592 mice. C Pathway enrichment analysis of KEGG pathways within the core network. D GO term analysis was performed on differentially expressed genes
List of top 30 GO terms
| ID | Term | Category | P val | Enrichment_score |
|---|---|---|---|---|
| GO:0009247 | Glycolipid biosynthetic process | Biological_process | 0.000 | 15.64464061 |
| GO:0010466 | Negative regulation of peptidase activity | Biological_process | 0.000 | 4.635449068 |
| GO:0006811 | Ion transport | Biological_process | 0.000 | 2.433610761 |
| GO:0017158 | Regulation of calcium ion-dependent exocytosis | Biological_process | 0.000 | 8.217386985 |
| GO:0048791 | Calcium ion-regulated exocytosis of neurotransmitter | Biological_process | 0.000 | 7.532604736 |
| GO:0016079 | Synaptic vesicle exocytosis | Biological_process | 0.000 | 7.136151855 |
| GO:0005576 | Extracellular region | Cellular_component | 0.000 | 2.479256595 |
| GO:0005615 | Extracellular space | Cellular_component | 0.000 | 2.321368755 |
| GO:0016020 | Membrane | Cellular_component | 0.000 | 1.440847291 |
| GO:0016324 | Apical plasma membrane | Cellular_component | 0.000 | 3.122066437 |
| GO:0016021 | Integral component of membrane | Cellular_Component | 0.000 | 1.367007432 |
| GO:0009897 | External side of plasma membrane | Cellular_component | 0.000 | 2.965963115 |
| GO:0005886 | Plasma membrane | Cellular_component | 0.000 | 1.421755063 |
| GO:0009986 | Cell surface | Cellular_component | 0.001 | 2.135226539 |
| GO:0005811 | Lipid droplet | Cellular_component | 0.001 | 4.580638015 |
| GO:0005581 | Collagen trimer | Cellular_component | 0.001 | 4.519562842 |
| GO:0019911 | Structural constituent of myelin sheath | Molecular_function | 0.000 | 20.33803279 |
| GO:0005544 | Calcium-dependent phospholipid binding | Molecular_function | 0.000 | 7.975699132 |
| GO:0004190 | Aspartic-type endopeptidase activity | Molecular_function | 0.000 | 10.84695082 |
| GO:0070492 | Oligosaccharide binding | Molecular_function | 0.000 | 14.52716628 |
| GO:0030414 | Peptidase inhibitor activity | Molecular_function | 0.000 | 4.519562842 |
| GO:0042834 | Peptidoglycan binding | Molecular_function | 0.000 | 12.71127049 |
| GO:0004198 | Calcium-dependent cysteine-type endopeptidase activity | Molecular_function | 0.000 | 10.70422778 |
| GO:0030246 | Carbohydrate binding | Molecular_function | 0.001 | 3.097162353 |
| GO:0030276 | Clathrin binding | Molecular_function | 0.001 | 5.021736491 |
| GO:0008375 | Acetylglucosaminyltransferase activity | Molecular_function | 0.001 | 6.163040238 |
The [bold] signaling pathways and DEGs have been shown that they can play radioprotective roles in the process of IR induced intestinal injury
Partial differential genes list
| Gene_id | FoldChange | Regulation | |
|---|---|---|---|
| Pde2a | 1.633734 | 0.002347 | Up |
| Pglyrp1 | 1.698371 | 0.001095 | Up |
| Arhgap24 | 1.914116 | 9.08E-05 | Up |
| Nov | 2.23212 | 0.004262 | Up |
| Defa28 | 2.509691 | 0.018393 | Up |
| Agr2 | 2.671268 | 1.54E-06 | Up |
| Clu | 3.250905 | 8.03E-06 | Up |
| Wnt11 | 3.569708 | 0.000169 | Up |
| Plet1 | 3.675288 | 1.35E-05 | Up |
| Ltf | 3.68403 | 0.000989 | Up |
| Scnn1g | 5.190979 | 0.000447 | Up |
| Ntf5 | 5.831077 | 0.003121 | Up |
| Scnn1b | 7.607157 | 6.84E-06 | Up |
The [bold] signaling pathways and DEGs have been shown that they can play radioprotective roles in the process of IR induced intestinal injury
Fig. 5FG-4592 activates TLR4-related pathways. A RNA level to verify the expression of DEGs, including IL-6, IGFBP2, SOX2, HK1, REG3B, REG2 and REG3D. B The expression of TLR4 pathway-related proteins. C The radioprotection of FG-4592 on TLR4 KO mice