| Literature DB >> 35725991 |
Hae-Young Kim1, Anna Bershteyn2, Jessica B McGillen2, Jaimie Shaff3, Julia Sisti3, Charles Ko3, Radhika Wikramanayake3, Remle Newton-Dame4, R Scott Braithwaite2.
Abstract
Stay-at-home restrictions such as closure of non-essential businesses were effective at reducing SARS-CoV-2 transmission in New York City (NYC) in the spring of 2020. Relaxation of these restrictions was desirable for resuming economic and social activities, but could only occur in conjunction with measures to mitigate the expected resurgence of new infections, in particular social distancing and mask-wearing. We projected the impact of individuals' adherence to social distancing and mask-wearing on the duration, frequency, and recurrence of stay-at-home restrictions in NYC. We applied a stochastic discrete time-series model to simulate community transmission and household secondary transmission in NYC. The model was calibrated to hospitalizations, ICU admissions, and COVID-attributable deaths over March-July 2020 after accounting for the distribution of age and chronic health conditions in NYC. We projected daily new infections and hospitalizations up to May 31, 2021 under the different levels of adherence to social distancing and mask-wearing after relaxation of stay-at-home restrictions. We assumed that the relaxation of stay-at-home policies would occur in the context of adaptive reopening, where a new hospitalization rate of ≥ 2 per 100,000 residents would trigger reinstatement of stay-at-home restrictions while a new hospitalization rate of ≤ 0.8 per 100,000 residents would trigger relaxation of stay-at-home restrictions. Without social distancing and mask-wearing, simulated relaxation of stay-at-home restrictions led to epidemic resurgence and necessary reinstatement of stay-at-home restrictions within 42 days. NYC would have stayed fully open for 26% of the time until May 31, 2021, alternating reinstatement and relaxation of stay-at-home restrictions in four cycles. At a low (50%) level of adherence to mask-wearing, NYC would have needed to implement stay-at-home restrictions between 8% and 32% of the time depending on individual adherence to social distancing. At moderate to high levels of adherence to mask-wearing without social distancing, NYC would have needed to implement stay-at-home restrictions. In threshold analyses, avoiding reinstatement of stay-at-home restrictions required a minimum of 60% adherence to mask-wearing at 50% adherence to social distancing. With low adherence to mask-wearing and social distancing, reinstatement of stay-at-home restrictions in NYC was inevitable. High levels of adherence to social distancing and mask-wearing could have attributed to avoiding recurrent surges without reinstatement of stay-at-home restrictions.Entities:
Mesh:
Year: 2022 PMID: 35725991 PMCID: PMC9207433 DOI: 10.1038/s41598-022-13310-1
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.996
Key parameters for the SEIQ-R model with concurrent testing, tracing, and quarantine and disease progression in NYC.
| Symbol | Description | Baseline value | References |
|---|---|---|---|
| Time from exposure to being infectious, days | 4.0 | [ | |
| Infectious period, days | 8.0 | [ | |
| Attack rate at the beginning of the outbreak | Derived | [ | |
| Attack rate under quarantine | Derived | [ | |
| Time from exposure to index case testing, days* | 4.0 | Assumption | |
| Proportion of infected individuals receiving index case testing | 0.4 | Assumption | |
| Time from exposure to contact tracing, days* | 4.0 | Assumption | |
| Proportion of contacts of index cases being traced | Derived | ||
| Proportion of population traceable | 0.70 | Assumption | |
| Number of contact tracers | 3000 | [ | |
| Number of contacts successfully traced per tracer per day | 2 | [ | |
| Number of contacts per index case before stay-at-home restrictions are imposed | 52 | [ | |
| Number of contacts per index case after stay-at-home restrictions are imposed | 5 | [ | |
| Number of contacts who need to be traced | Derived | ||
| Time from exposure to recurrent and random testing, days | 4.0 | Assumption | |
| Proportion of infected individuals receiving recurrent and random testing | Derived | ||
*This assumes that index cases and contacts will be isolated or quarantined upon receiving the diagnostic and/or laboratory test, whichever comes first.
Key parameters for the epidemic, clinical outcomes, and disease progression of COVID-19 in NYC.
| Description | Baseline value* | Range | References |
|---|---|---|---|
| Asymptomatic infections | 60.0% | 40.50–87.1 | [ |
| Symptomatic infections | 40.0% | 12.9–59.5 | [ |
| Mild symptoms | 73.5% | 55.0–91.9 | [ |
| Severe symptoms | 16.0% | 4.9–27.1 | [ |
| Critically ill patients admitted to hospitals | 9.0% | 2.8–15.2 | [ |
| Critically ill patients outside hospitals | 1.5% | 0.5–2.5 | [ |
| ICU admission among the hospitalized | 36.0% | 14.2–45.0 | [ |
| Deaths among critically ill patients admitted to ICU | 80.0% | 60.0–100.0 | [ |
| Time to symptom onset (incubation period) | 5.1 | 4.5–5.8 | [ |
| Time from symptom onset to hospitalization | 11.0 | 3.0–13.75 | |
| Time from symptom onset to ICU hospitalization | 14.0 | 4.0–17.5 | [ |
| Time from symptom onset to death | 16.0 | 0–27.0 | [ |
| Time in hospitalization for severely ill patients | 11.0 | 3.0–13.5 | [ |
| ICU length of stays among survivors who were critically ill | 21.0 | 3.0–23.0 | [ |
| ICU length of stays among non-survivors who were critically ill | 2.0 | 0–13.0 | [ |
| Time in non-ICU units after discharged from ICU | 14.0 | 11.6–47.2 | [ |
*The baseline values were primarily informed by the internal data from NYC DoHMH during the early epidemic by April 2020 when available.
COVID-19 coronavirus disease-2019, ICU intensive care unit, DOHMH Department of Health and Mental Hygiene.
Estimated effective reproduction numbers (Rt) after full reopening under the different adherence to social distancing and mask-wearing.
| Scenario | Adherence to social distancing* | Adherence to mask-wearing | Re in full reopening (IQR) |
|---|---|---|---|
| 1 | None | None | 3.080 (2.908, 3.633) |
| 2 | 50% | None | 1.957 (1.848, 2.308) |
| 3 | None | 50% | 2.079 (1.963, 2.452) |
| 4 | 50% | 50% | 1.321 (1.247, 1.558) |
| 5 | None | 70% | 1.679 (1.585, 1.980) |
| 6 | 50% | 70% | 1.067 (1.007, 1.258) |
| 7 | None | 90% | 1.278 (1.207, 1.508) |
| 8 | 50% | 90% | 0.812 (0.767, 0.958) |
*Social distancing is equivalent to keeping 6 feet distance from others.
IQR Interquartile Range.
Figure 1Estimated time spent under resumption and relaxation of restrictions between June 1, 2020 and May 31, 2021 by adherence to social distancing and mask-wearing. Yellow bars indicate the time spent under resumption of restrictions. Green and blue bars indicate the time up to 4 weeks (partial relaxation) and ≥ 4 weeks (full relaxation) after relaxation of restrictions, respectively. Adherence to mask-wearing is assumed as follows: 0% (Scenario 1 and 2), 50% (Scenario 3 and 4), 70% (Scenario 5 and 6), or 90% (Scenario 7 and 8). Adherence to social distancing is assumed to be 0% (Scenario 1, 3, 5, and 7) or 50% (Scenario 2, 4, 6, and 8).
Figure 2Daily COVID-19 new infections under resumption and relaxation of restrictions between June 2020 and May 2021: (A) without adherence to social distancing and (B) with 50% adherence to social distancing. Each colored line indicates the level of mask adherence at 0% (red), 50% (orange), 70% (green) or 90% (blue).
Figure 3Daily COVID-19 new hospitalizations under resumption and relaxation of restrictions between June 2020 and May 2021: (A) without adherence to social distancing and (B) with 50% adherence to social distancing. Each colored line indicates the level of mask adherence at 0% (red), 50% (orange), 70% (green) or 90% (blue).
Figure 4Daily COVID-19-attributable deaths under resumption and relaxation of restrictions between June 2020 and May 2021: (A) without adherence to social distancing and (B) with 50% adherence to social distancing. Each colored line indicates the level of mask adherence at 0% (red), 50% (orange), 70% (green) or 90% (blue).
Figure 5Threshold analysis of adherence necessary to prevent any reinstatement of stay-at-home restrictions between June 2020 and May 2021 in NYC. Dark grey region corresponds to a range of adherence to social distancing and mask-wearing which necessitates the reinstatement of stay-at-home restrictions, while light grey region corresponds to a range avoiding any reinstatement of stay-at-home restrictions.