| Literature DB >> 35723074 |
Kanchalika Sathianvichitr1, Benjaporn Sigkaman2, Niphon Chirapapaisan1, Poramaet Laowanapiban3, Tanyatuth Padungkiatsagul4, Supanut Apinyawasisuk5,6, Juthamat Witthayaweerasak7, Wanicha Chuenkongkaew1.
Abstract
PURPOSE: Leber's hereditary optic neuropathy (LHON), the most common mitochondrial optic neuropathy, causes visual loss, especially in young adults. Due to the absence of epidemiological data in Southeast Asia, we aimed to determine Thai LHON patients' characteristics (demographic data, mutation types, and prognoses) as the first study in this region.Entities:
Keywords: G11778A; Leber hereditary optic neuropathy; T14484C; mitochondrial disease; visual loss
Mesh:
Substances:
Year: 2022 PMID: 35723074 PMCID: PMC9191831 DOI: 10.1080/07853890.2022.2082517
Source DB: PubMed Journal: Ann Med ISSN: 0785-3890 Impact factor: 5.348
Figure 1.Flow diagram of patient selection process.
PCR and sequencing primer of 3 common genetic tests.
| Gene | mtDNA mutation | PCR Primers and sequencing primers (5’→3’) | Temperature (oC) | Base position | Product size (bp) |
|---|---|---|---|---|---|
| PCR-RFLP | |||||
| ND4 | G11778A | F: CTC ATT ACT ATT CTG CCT AGC AAA CTC AAA CTA CGA ACG CAC TCA TGA TC | 55 | 11728–11942 | 215 |
| Bi-directional PCR, followed by Sanger sequencing technique | |||||
| ND4 | G11778A | F: CTC TAC CTC TCT ATA CTA ATC TCC CTA CAA ATC TCC TTA ATG CTA | 55 | 11039–11942 | 904 |
| ND6 | T14484C | F: CAT CAC CTC AAC CCA AAA AGG C | 55 | 14061–14873 | 813 |
| ND1 | G3460A | F: CCC GAT GGT GCA GCC GC | 55 | 3007–3728 | 722 |
F: forward primer; R: reverse primer; S: sequencing primer.
Limitation of the study. Before 2013, PCR-RFLP was primarily done to detect the G11778A mutation, not the other LHON primary mutation types.
If it did not cause confusion, the S sequencing primer base position should be mentioned.
Demographic data, by mtDNA mutation.
| Mutation position in mtDNA | G11778A | T14484C |
|---|---|---|
| Gender | ||
| Male | 191 (91.4%) | 19 (95%) |
| Female | 18 (8.6%) | 1 (5%) |
| Age at onset | ||
| Median (years) | 21.9 | 33.0 |
| Range (years) | 5.10, 59.93 | 15.80, 65.90 |
mt DNA: mitochondrial DNA.
Comparison of visual progression of LHON patients with G11778A and T14484C mutations whose follow-up exceeded one year.
| Mutation | |||
|---|---|---|---|
| 11778 | 14484 | ||
| Median (IQR) | Median (IQR) | ||
| Follow-up period (years) | 5.4 (2.8, 8.3) | 2.6 (1.6, 4.5) |
|
| BCVA (logMAR) at first visitb | 1.6 (1.2, 2.3) | 1.7 (1.0, 2.3) | 0.115 |
| BCVA (logMAR) at last visit | 1.6 (1.3, 2.3) | 0.5 (0.2, 1.8) |
|
| Difference of BCVA between first and last visit (logMAR) | 0.0 (−0.3, 0.2) | −0.65 (−1.5, −0.2) |
|
*Mann–Whitney U test (significance, p < 0.05).
bBCVA within 6 months of onset.
BCVA: best-corrected visual acuity; IQR, interquartile range.
Generalised estimating equation (GEE) analysis of correlation between final BCVA and other variables.
| Variables | Co-efficiency | Standard error | 95% CI | |
|---|---|---|---|---|
| Male gender | 1.255 | 0.333 | 0.602 to 1.908 |
|
| G11778A mutation | 1.016 | 0.297 | 0.434 to 1.598 |
|
| Age | 0.033 | 0.011 | 0.010 to 0.055 |
|
| BCVA (logMAR) at first visit | 0.014 | 0.135 | −0.250 to 0.278 | 0.918 |
BCVA: best-corrected visual acuity.