Literature DB >> 35719727

Protocol for construction and characterization of direct electron transfer-based enzyme-electrode using gold binding peptide as molecular binder.

Hyeryeong Lee1, Eun Mi Lee1, Stacy Simai Reginald1, In Seop Chang2.   

Abstract

Here, we present a protocol for constructing direct electron transfer (DET)-based enzyme-electrodes using gold-binding peptide (GBP). We describe fusion of four GBPs to flavin adenine dinucleotide (FAD)-dependent glucose dehydrogenase gamma-alpha complex (GDHγα), as model oxidoreductase, to generate four GDHγα variants. We then detail the measurements of catalytic and bioelectrochemical properties of these GDHγα variants on electrode together with surface morphology of GDHγα variants immobilized on gold surface. This protocol is useful for construction and validation of enzyme-based electrocatalytic system. For complete details on the use and execution of this protocol, please refer to Lee et al. (2021).
© 2022 The Author(s).

Entities:  

Keywords:  Atomic Force Microscopy (AFM); Biophysics; Biotechnology and bioengineering; Material sciences; Microscopy; Molecular Biology; Protein Biochemistry; Protein expression and purification

Mesh:

Substances:

Year:  2022        PMID: 35719727      PMCID: PMC9204793          DOI: 10.1016/j.xpro.2022.101466

Source DB:  PubMed          Journal:  STAR Protoc        ISSN: 2666-1667


Before you begin

Plasmid construction for GBP-expressing enzymes

Timing: 3–4 days Construct plasmid expressing wild-type and GBP-fused GDHγα; steps 1 and 2 describe plasmid modification for constructing expression vector for wild-type and GBP-fused GDHγα. Acquire pET21a (+) plasmids with insert encoding FAD-dependent glucose dehydrogenase gamma-alpha complex (GDHγα) of Burkholderia lata (GenBank ID: α subunit of FAD-GDH: Bcep18194_B1293, γ subunit of FAD-GDH: Bcep18194_B1292) as template. Insert the gene encoding gold-binding peptides that includes LGBP (LKAHLPPSRLPS), MGBP (MHGKTQATSGTIQS), TGBP (TGTSVLIATPGV), or VGBP (VSGSSPDS), at each C-terminus of catalytic α subunits using whole plasmid PCR mutagenesis. The sequence and fusion site of GBPs could be varied depending on type of target proteins or research objectives. Prepare the PCR reaction mixture using Q5® Hot Start High-Fidelity 2× Master Mix (NEB) and set PCR cycles using corresponding primer sets as indicated in materials and equipment. Purify the fragment DNA from PCR reaction mixtures using PCR purification kit (GeneAll). Ligate the DNA fragments using KLD enzyme mix (NEB) for 5 min at room temperature (25°C). Transform DH5α Chemically Competent E. coli with 1 μL of the above ligation mixture by performing the heat-shock in a water bath at 42°C for 30 s followed by incubation on ice for 2 min and incubate at 37°C for 1 h after adding 400 μL SOC medium (NEB). Transfer 50 μL of the cultures to Luria-Berani (LB) agar plates containing 100 μg/mL Ampicillin and incubate for 14–16 h at 37°C on rotary shaker of 180 rpm. Pick 8 single colonies or more, for each construct and inoculate with 4 mL LB medium containing 100 μg/mL of Ampicillin and incubate for 16 h at 37°C with shaking at 180 rpm. Then, extract plasmids DNA using Exprep™ Plasmid SV (GeneAll). Sequence the purified plasmids.

Key resources table

Materials and equipment

Set of primers used for genetic GBP linkage PCR reaction master mix Store the reagents at 4°C, for 1 year. PCR cycling conditions KLD enzyme mix reaction Store the reagents at 4°C, for 1 year. LB medium Store the solution at room temperature after sterilization. Use it within 1 year. TB medium Store the solution at room temperature after sterilization. Use it within 1 year. 1 M phosphate buffer Store the solution at room temperature after sterilization. Use it within 1 year. Buffer A, pH 7.4 Store the solution at room temperature after sterilization. Use it within 1 year. Adjust pH with concentrated HCl or NaOH when the pH could be different after making mixture. Buffer A500, pH 7.4 Store the solution at room temperature after sterilization. Use it within 1 year. Adjust pH with concentrated HCl or NaOH when the pH could be different after making mixture. Buffer An (n=imidazole content in mM), pH 7.4 Store the prepared mixture at 4°C. Use it within 1 week. Phosphate buffered saline (PBS), pH 7.4 Store the solution at room temperature after sterilization. Use it within 1 year. 10 mM potassium phosphate buffer, pH 7.4 Store the solution at room temperature after sterilization. Use it within 1 year. DCIP mixture The DCIP and PMS stocks are dissolved in H2O, and they are highly sensitive to light. Store the reagents at 4°C. Use it within 1 h.

Step-by-step method details

Starter culture

Timing: 24 h This section describes transforming the the expression hosts and prepare start cultures. Transform expression plasmid into Escherichia coli BL21-Rosetta (DE3) with heat shock method. Plate on LB agar plates containing 100 μg/mL of ampicillin and incubate 14–16 h Tat 37°C. Pick a single colony from LB-ampicillin agar plate that has been incubated 14–16 h and inoculate a starter culture of 5 mL LB-ampicillin medium and incubate at 37°C for 8 h. Inoculate Terrific Broth (TB) medium containing 100 μg/mL ampicillin with the starter culture at a 1:50 dilution.

Enzyme expression and purification

Timing: 30 h This section describes the cultivation of expression hosts and performing the extraction and purification of target proteins. Culture the Escherichia coli BL21-Rosetta (DE3) harboring target gene containing plasmid in 500 mL TB medium containing 100 μg/mL ampicillin in 1 L flask at 37°C. Let the cells grow for 2–3 h until OD600 reaches to 0.6. Add IPTG to a final concentration of 0.2 mM and further incubate the cell culture at 16°C for 18 h. Harvest the cells by centrifugation at 3,500 g and 4°C for 20 min. Mix harvested cells with adding 15 mL Buffer A50 (pH 7.4). Disrupt the resuspended cells by sonication (VCX 500, Sonics & Materials) using 150 cycles of 2 s ON and 4 s OFF at 40% amplitude (500 Watts and 20 kHz frequency) to assure complete cell lysis. Centrifuge the lysates at 13,000 g and 4°C for 30 min. Collect the supernatant and filter it through 0.45-μm syringe filter (ADVANTEC) to remove remaining cell debris and inclusion bodies. This step is essential to increase protein purity. Equilibrate the filtered soluble fractions (∼15 mL) with Ni-NTA agarose resin (4 mL) with end-to-end rotation (40 rpm). The nickel affinity agarose resin is priorly equilibrated with Buffer A50 (pH 7.4). Wash the column with Buffer A50 (pH 7.4) of 10 column volumes. Pass the two column volumes of Buffer A70, Buffer A350, and Buffer A500 (pH 7.4) through nickel column, sequentially. Exchange the protein-containing buffer with PBS (pH 7.4) using a Amicon Ultra-15 30K filter (Millipore) centrifugal filter. Select a molecular weight cut-off (MWCO) close to one-third the molecular weight of the target protein size. Remove the his-tag by cleaving the TEV protease recognition site with the treatment of TEV protease. (NEB). Estimate the protein concentration by Bradford assay (Bradford, 1976). Adjust the protein concentration to be 0.33 μg/μL in 45 μL total volume. Add 5 μL of TEV Protease Reaction Buffer (10×) (NEB). Add 1 μL of TEV Protease (10 U) (NEB). Incubate at 30°C for 2 h. Conform the cleavage of his-tag on 10% SDS-PAGE gel. To remove or minimize cleaved his-tag and TEV protease (∼28 kDa) contents, filter the protein mixture through Amicon Ultra-15 30K filter (Millipore). The retention of protein structure after cleavage of his-tag could be confirmed with comparison of catalytic activities of protein before/after TEV protease treatment. The obtained proteins is recommended to be stored at 4°C and utilized within a week to avoid possible protein structural change which can lead to variation in biochemical and electrochemical results. The obtained protein concentration could be largely varied depending on protein types.

Enzyme activity assay

Timing: 20 min This section describes the measurements of the enzyme activity for glucose oxidation by DCIP assay. Prepare 60 μL DCIP mixture in 96-well plate (SPL) at 25°C as indicated in materials and equipment section (Inose et al., 2003). Add 20 μL purified enzyme (0.05 mg/mL) and incubate at 25°C for 3 min without stirring. Add 20 μL of 2 M glucose to initiate glucose oxidation, or 20 μL of deionized water to perform blank at OD600. After 1 min, stop the reaction by adding 100 μL of 6 M Urea and measure adsorption at OD600. Calculate enzyme activity based on the Beer-Lambert Law (Swinehart, 1962). Enzyme activity (U) = (Aglucose – Ablank) / [ε × path length (cm) × incubation time (min)], where A is adsorption at OD600 and ε is molar absorption coefficient of DCIP (16.3 mM/cm at pH 7.0) (Inose et al., 2003). In the case of GDHγα, approximately 12 U/mg of specific activity was obtained.

Atomic force microscopy (AFM)

Timing: 4 h This section describes the binding morphology of surface-immobilized gold binding peptide-fused enzyme could be examined via observing biofilm morphology on a gold substrate. To remove the dust or organic contaminants on gold coated silicon wafer (e.g., 5 mm × 5 mm), prepare 100 mL of 1:3 (v/v) of 30% H2O2/H2SO4 (piranha solution) in 500 mL beaker. Incubate the gold substrate in piranha solution for 10 min, at 25°C. Rinse the gold substrate with deionized water and dry it with pressurized nitrogen gas. Add 500 μL of 0.1 μM target enzyme dissolved in PBS (pH 7.4) into 1.5 mL microtube. Insert the surface-cleaned gold substrate in the enzyme solution containing microtube. Incubate the gold substrate in the enzyme solution-containing microtube, on a rotary shaker of 200 rpm, for 2 h (25°C). Remove weakly bound proteins on the gold surface by sonication (30 Hz) in enzyme-free PBS for 30 s. To remove salts on the surface, wash off the surface with stream of deionized water for 30 s. Dry the protein-bound gold surface with 99.9% nitrogen gas (Sinil Gas, Korea). Measure the surface morphology of protein-bound gold surface using AFM in non-contact mode. Fix the protein-bound gold substrate on sample stage of AFM instrument (XE-100; Park Systems, Langen, Germany). Install the 125-μm Si/Al-coated cantilevers (PPP-NCHR 10 M; Park Systems) with 200–400-kHz resonance frequency and 42 N/m spring constant. Align the cantilever on the center of sample surface. Image the surface morphology in 1 μm × 1 μm scan fields, at 1 Hz scan rate. After Acquiring raw AFM image, process the image flattening to remove the undesired artifacts such as slope and curvature, with XEI software (Park Systems). In this study, the 1st order fitting curve was utilized during image flattening. CRITICAL: The enzyme-bound specimen must be fully dried since remained water molecules could cause vertical drift in AFM imaging.

Cyclic voltammetry (CV)

Timing: 2–8 h This section describes cyclic voltammetry (CV) that is used to measure interfacial electron transfer rate between the enzymatic cofactor and electrode surface. By analyzing the onset potential, the presence of a direct electron transfer signal is identified, and the peak current in the cyclic voltammogram can provide evidence of interfacial direct electron transfer efficiency (Lee et al., 2020). In the case of FAD-dependent enzyme, it is known that -0.46 V (vs. Ag/AgCl) is ideal onset potential. Prepare screen-printed gold electrode (SPGE) (DropSens) that consists of Au working electrode (4 mm in diameter), Pt auxiliary electrode, and Ag pseudo-reference electrode (Lee et al., 2020). Before enzyme immobilization, the SPGE should be verified not to have interfering electrochemical signal by conducting CV with bare SPGE. Add 800 μL of 0.5 μM target enzyme dissolved in PBS buffer (pH 7.4) into a disposable cuvette. Immerse the SPGE into the enzyme solution containing cuvette and incubate it on the rotary shaker of 200 rpm, for 2 h at 25°C. Wash off the excess proteins on the gold working electrode surfaces with a stream of PBS, for 30 s. Connect the enzyme-modified SPGE to potentiostat (Autolab, Metrohm) via a connector. Immerse the enzyme-modified SPGE in the reactor (working volume: 10 mL) with 8 mL of 10 mM potassium phosphate buffer (pH 7.4). To detect glucose-led oxidative current, add 2 M glucose stock dissolved in 10 mM potassium-based phosphate buffer (pH 7.4) for glucose content to be 0–100 mM. Set the scan rate to be 100 mV/s and perform the CV in the potential range of -500 mV–400 mV, using Nova 1.11 program. The number of cycles was determined until the signal is stabilized. In this case, the signal was shown to be stabilized after individual 20–30 cycles. Also, when the scan direction is changed to reverse (compared with original direction), we did not observe large difference.

Expected outcomes

Surface morphology

This protocol provides methods to validate the relative binding affinity of fusion proteins toward gold material compared with the wild-type protein. The fusion proteins with GBP binder will be densely packed on the gold surfaces as GBP tag is specifically attached the gold material. The data below is the case of native and GBP-fused GDHγα which has dimension of 52.2 Å × 91.4 Å × 61.9 Å (Figures 1 and 2). As fusion GDHγα is densely crowded on the surface, the average height in the cross-sectional analysis was shown to be similar with molecular size. In contrast, the wild-type protein would be sparsely populated on the same surface, due to the non-specificity of wild-type protein toward Au surface. Further, the partial protein agglomeration in wild-type protein-bound surfaces could be observed (Figure 2).
Figure 1

AFM images for bare Au surface used for enzyme binding studies

(A and B) (A) Image in 2-D topography; (B) image in 3-D topography; scanned area is 1 μm × 1 μm.

Figure 2

AFM images of enzyme-immobilized gold surface

(A and B) (A) wild-type GDHγα, and (B) GBP-fused GDHγα immobilized on gold substrates. 5 mm × 5 mm of gold substrate were immersed in 0.1 μM of each protein for 2 h, for formation of enzymatic biofilm; scanned area is 1 μm × 1 μm: (upper panel) 3-D topography; (middle panel) 2-D topography; (lower panel) cross-sectional profile along the arrow in middle panel.

AFM images for bare Au surface used for enzyme binding studies (A and B) (A) Image in 2-D topography; (B) image in 3-D topography; scanned area is 1 μm × 1 μm. AFM images of enzyme-immobilized gold surface (A and B) (A) wild-type GDHγα, and (B) GBP-fused GDHγα immobilized on gold substrates. 5 mm × 5 mm of gold substrate were immersed in 0.1 μM of each protein for 2 h, for formation of enzymatic biofilm; scanned area is 1 μm × 1 μm: (upper panel) 3-D topography; (middle panel) 2-D topography; (lower panel) cross-sectional profile along the arrow in middle panel.

CV analysis

From CV analysis of enzyme-modified SPGE, the interfacial DET occurrence and DET-based oxidative current could be evaluated. In the case of wild-type enzyme on SPGE, the weak signal of oxidative current will appear since unfavorable ET conditions were created by the uncontrolled orientation of the native enzyme on the electrode surface due to non-specific interaction of the enzyme with the inorganic surface. In the fusion protein modified SPGE, the controlled orientation of fusion protein on inorganic surface could present onset potential close to the standard potential of cofactor (electron donor) and clear oxidation wave, given that the binding conformation of the fusion protein on the surface is optimized for cofactor-surface interface is in close-proximity (Figure 3).
Figure 3

CV profiles of enzyme-modified SPGEs

(A–C) CV profiles at (A) wild-type GDHγα/SPGE, (B) MGBP-fused GDHγα/SPGE, and (C) TGBP-fused GDHγα/SPGE in the absence and presence of 100 mM glucose in PBS buffer (pH 7.4) (scan rate: 100 mV/s); inserted graph in (A): CV graphs of the selected region in the figures.

Depending on fusion site of GBP or fused GBP type, the interfacial DET capability between redox cofactor and electrode surface could be highly varied. According to Figure 3, GDHγα-TGBP/SPGE shows sluggish oxidative current while GDHγα-MGBP/SPGE exhibit highly efficient DET-based electrocatalytic current. CV profiles of enzyme-modified SPGEs (A–C) CV profiles at (A) wild-type GDHγα/SPGE, (B) MGBP-fused GDHγα/SPGE, and (C) TGBP-fused GDHγα/SPGE in the absence and presence of 100 mM glucose in PBS buffer (pH 7.4) (scan rate: 100 mV/s); inserted graph in (A): CV graphs of the selected region in the figures.

Limitations

For in-depth analysis of electrochemical phenomenon, the peptide-surface interactions and the binding conformations of fusion proteins on the gold surface are needed to be computationally simulated. If the molecular dynamics (MD) simulation could be performed, the more precise information about structural and electrochemical conditions between enzymatic cofactor and electrode can be achieved.

Troubleshooting

Problem 1

The solubility is lowered after modifying plasmid constructs (step 8).

Potential solution

Add additives (e.g., 0.1%–0.5% Triton-X 100, 0.1%–0.5% Tween20, etc.) in the buffer A. Avoid using β-mercaptoethanol as it breaks disulfide bond which is required for GDHα and GDHγ subunits to be combined. Add glycerol in the buffer A to stabilize the proteins.

Problem 2

The cleavage efficiency of his-tag from enzyme is highly low (step 16). Extend the incubation time to 3 h for 30°C. Use freshly purified enzyme.

Problem 3

The fusion protein is not densely packed on target inorganic surface during AFM measurement (step 28). Extend the enzyme immobilization time up to 12 h. Find optimum pH (6–9) of binding buffer possessing target enzyme by confirming adsorption of wild-type enzymes on Au surface.

Problem 4

Non-specific binding of wild-type protein is severely observed (step 29). Add the non-ionic detergent (e.g., 0.1%–0.5% Tween-20, 0.1%–0.5% Triton X-100, etc.) in the protein solution. Adjust to optimum pH (6–9) or NaCl content (0–500 mM) of PBS (pH7.4).

Problem 5

During AFM measurement, the surface topography is severely drifted (step 32). Confirm cantilever contamination. Lower the scan rate to ∼0.3 Hz. Dry the sample in the desiccator over 12 h.

Resource availability

Lead contact

Further information and requests for resources and reagents should be directed to and will be fulfilled by the lead contact, In Seop Chang (ischang@gist.ac.kr).

Materials availability

This study did not generate new materials.
REAGENT or RESOURCESOURCEIDENTIFIER
Bacterial and virus strains

DH5α Chemically Competent E. coli(Enzynomics,Daejeon, Republic of Korea)CP010
Rosetta (DE3) Chemically Competent E. coli(Enzynomics,Daejeon, Republic of Korea)CP1010

Recombinant DNA

pET21a (+) plasmid encoding GDHγα of Burkholderia lata(Lee et al., 2021)(Available upon request)

Chemicals, peptides, and recombinant proteins

Q5® Hot Start High-Fidelity 2× Master MixNew England Biolabs (Ipswich, MA, USA)M0494S
KLD enzyme mixNew England Biolabs (Ipswich, MA, USA)M0554S
Expin™ PCR SVGeneAll (Seoul, South Korea)103-150
TryptoneSigma-Aldrich (St. Louis, MO)T9410
Yeast extractBD Difco, USA212750
SOC mediumNew England Biolabs (Ipswich, MA, USA)B9020
2,6-dichloroindophenolSigma-Aldrich (St. Louis, MO)D1878
Phenazine methosulfateSigma-Aldrich (St. Louis, MO)P9625
TEV protease and 10× TEV Protease Reaction BufferNew England Biolabs (Ipswich, MA, USA)P8112S
Ni-NTA AgaroseQIAGEN (Hilden, Germany)30210
Ampicillin sodium saltSigma-Aldrich (St. Louis, MO)A9518-5G
IPTGGoldBio367-93-1
Gold-coated silicon waferSigma-Aldrich (St. Louis, MO)643262
Hydrogen Peroxide Solution 30%Sigma-Aldrich (St. Louis, MO)7722-84-1
Sulfuric acidSigma-Aldrich (St. Louis, MO)258105-2.5L
UreaJunsei, Japan57-13-6
ImidazoleSigma-Aldrich (St. Louis, MO)56750
99.9% nitrogen gasSinil Gas, KoreaN/A

Oligonucleotides

LGBP_Forward: GCCGCCGTCTCGTCTGCCGTCTTGATTTTAGGGGCGCAAAGGAGAAGThis studyN/A
LGBP_Reverse: AGGTGAGCTTTCAGGCCGCCACCACCGCCGACTTThis studyN/A
MGBP_Forward CAACCTCGGGCACGATCCAAAGTTGACCATGGCCAACACTTGTThis studyN/A
MGBP_Reverse: CTTGTGTCTTACCGTGCATCCCGCCCCCCCCGCCGACTTThis studyN/A
TGBP_Forward: ATTGCTACTCCGGGTGTGTAGCTGAAAGCTCAThis studyN/A
TGBP_Reverse: CAGTACGGACGTACCAGTGCCGCCACCACCGCCGACTTCCTTThis studyN/A
VGBP_Forward: TCCCCGGATAGCTAGCTGAAAGThis studyN/A
VGBP_Reverse: GCTACCGCTTACGCCGCCACCACCGCCGACTTCCTTThis studyN/A

Software and algorithms

XEI softwarePark Systemshttps://www.parksystems.com/kr/
Nova 1.11Metrohm Autolabhttps://www.metrohm-autolab.com/Products/Echem/Software/Nova.html

Other

0.45-μm syringe filterADVANTEC, Japan25cs045as
Amicon Ultra-15 30K filterMillipore, USAUFC903024
96-well plateSPL Life Sciences, Korea30096
Screen-printed gold electrodeDropSens, Spain250AT
125-μm Si/Al-coated cantilevers, PPP-NCHR 10 MPark Systems, Korea610-1051
AFM instrument, XE-100Park Systems, Langen, GermanyN/A
Cuvetteratiolab, Dreieich, Germany2712120
potentiostatMetrohm Autolab BV, NetherlandsN/A

Set of primers used for genetic GBP linkage

Type of GBPsPrimerSequence (5′– 3′)
LGBPLGBP_ForwardGCCGCCGTCTCGTCTGCCGTCTTGATTTTAGGGGCGCAAAGGAGAAG
LGBP_ReverseAGGTGAGCTTTCAGGCCGCCACCACCGCCGACTT
MGBPMGBP_ForwardCAACCTCGGGCACGATCCAAAGTTGACCATGGCCAACACTTGT
MGBP_ReverseCTTGTGTCTTACCGTGCATCCCGCCCCCCCCGCCGACTT
TGBPTGBP_ForwardATTGCTACTCCGGGTGTGTAGCTGAAAGCTCA
TGBP_ReverseCAGTACGGACGTACCAGTGCCGCCACCACCGCCGACTTCCTT
VGBPVGBP_ForwardTCCCCGGATAGCTAGCTGAAAG
VGBP_ReverseGCTACCGCTTACGCCGCCACCACCGCCGACTTCCTT

PCR reaction master mix

ReagentAmount
Q5 High-Fidelity 2× Master Mix12.5 μL
10 μM Forward Primer1.25 μL
10 μM Reverse Primer1.25 μL
Template DNA1 μL (30 ng)
Nuclease-Free Water9 μL
Total25 μL

Store the reagents at 4°C, for 1 year.

PCR cycling conditions

StepsTemperatureTimeCycles
Initial Denaturation98°C30 s1
Denaturation98°C10 s27 cycles
Annealing75°C30 s
Extension72°C4 min 30 s
Final extension72°C2 min1
Hold4°Cforever

KLD enzyme mix reaction

ReagentAmount
PCR Product1 μL (100 ng)
KLD Reaction Buffer (2×)5 μL
KLD Enzyme Mix (10×)1 μL
Nuclease-Free Water3 μL
Total10 μL

Store the reagents at 4°C, for 1 year.

LB medium

ReagentAmount
Tryptone10 g
Yeast extract5 g
NaCl10 g
H2O∼ 1 L
Total1 L

Store the solution at room temperature after sterilization. Use it within 1 year.

TB medium

ReagentAmount
Tryptone20 g
Yeast extract24 g
Glycerol4 mL
1 M Phosphate buffer (0.17 M KH2PO4, 0.72 M K2HPO4)100 mL
H2O∼ 1 L
Total1 L

Store the solution at room temperature after sterilization. Use it within 1 year.

1 M phosphate buffer

ReagentAmountFinal concentration
K2HPO4 (174.18 g/mol)125.41 g0.72 M
KH2PO4 (136.09 g/mol)23.14 g0.17 M
H2O∼ 1 LN/A
Total1 LN/A

Store the solution at room temperature after sterilization. Use it within 1 year.

Buffer A, pH 7.4

ReagentAmountFinal concentration
Na2HPO4 (141.96 g/mol)2.14 g15.08 mM
NaH2PO4 (119.98 g/mol)0.59 g4.92 mM
NaCl (58.44 g/mol)29.22 g500 mM
H2O∼ 1 LN/A
Total1 LN/A

Store the solution at room temperature after sterilization. Use it within 1 year.

Buffer A500, pH 7.4

ReagentAmountFinal concentration
Na2HPO4 (141.96 g/mol)2.14 g15.08 mM
NaH2PO4 (119.98 g/mol)0.59 g4.92 mM
NaCl (58.44 g/mol)29.22 g500 mM
Imidazole (68.08 g/mol)34.04500 mM
H2O∼ 1 LN/A
Total1 LN/A

Store the solution at room temperature after sterilization. Use it within 1 year.

Buffer An (n=imidazole content in mM), pH 7.4

SolutionVolume for buffer An
n=50n=70n=350
Buffer A90 mL86 mL30 mL
Buffer A50010 mL14 mL70 mL
Total100 mL100 mL100 mL

Store the prepared mixture at 4°C. Use it within 1 week.

Phosphate buffered saline (PBS), pH 7.4

ReagentAmountFinal concentration
Na2HPO4 (141.96 g/mol)1.42 g0.01 M
KH2PO4 (136.09 g/mol)0.245 g0.0018 M
NaCl (58.44 g/mol)8 g0.137 M
KCl0.2 g0.0027 M
H2O∼ 1 LN/A
Total1 LN/A

Store the solution at room temperature after sterilization. Use it within 1 year.

10 mM potassium phosphate buffer, pH 7.4

ReagentAmountFinal concentration
K2HPO4 (174.18 g/mol)1.212 g6.958 mM
KH2PO4 (136.09 g/mol)0.414 g3.042 mM
H2O∼ 1 LN/A
Total1 LN/A

Store the solution at room temperature after sterilization. Use it within 1 year.

DCIP mixture

ReagentAmount
50 mM Dichlorophenolindophenol (DCIP)2 μL
60 mM Phenazine methosulfate (PMS)20 μL
100 mM potassium phosphate buffer (pH 7.4)20 μL
H2O18 μL
Total60 μL
  4 in total

1.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

2.  Biosensing and electrochemical properties of flavin adenine dinucleotide (FAD)-Dependent glucose dehydrogenase (GDH) fused to a gold binding peptide.

Authors:  Hyeryeong Lee; Yoo Seok Lee; Stacy Simai Reginald; Seungwoo Baek; Eun Mi Lee; In-Geol Choi; In Seop Chang
Journal:  Biosens Bioelectron       Date:  2020-07-04       Impact factor: 10.618

3.  Cloning and expression of the gene encoding catalytic subunit of thermostable glucose dehydrogenase from Burkholderia cepacia in Escherichia coli.

Authors:  Ken Inose; Masako Fujikawa; Tomohiko Yamazaki; Katsuhiro Kojima; Koji Sode
Journal:  Biochim Biophys Acta       Date:  2003-02-21
  4 in total

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