Literature DB >> 35715682

Genetic Analysis of HSP40/DNAJ Family Genes in Parkinson's Disease: a Large Case-Control Study.

Kailin Zhang1, Hongxu Pan1, Yuwen Zhao1, Yige Wang1,2, Qian Zeng1, Xun Zhou3, Runcheng He3, Xiaoxia Zhou1, Yaqin Xiang1, Zhou Zhou3, Yu Li1, Qian Xu1, Qiying Sun3, Jieqiong Tan4, Xinxiang Yan1, Jinchen Li2,3,4, Jifeng Guo1,2,4,5, Beisha Tang1,2,4,5, Zhenhua Liu6,7,8,9.   

Abstract

Molecular chaperones were reported to play an important role in PD pathogenesis. Recent studies revealed the association of several HSP40/DNAJ family genes with PD, but no genetic analysis of all the DNAJ family genes in PD has been conducted. To systematically analyze the genetic impact of all the DNAJ family genes in PD, we performed genetic analysis for these genes in a large case-control study. We analyzed the rare variants in 49 DNAJ family genes from 3879 PD patients and 2931 healthy controls by whole-exome sequencing and whole-genome sequencing. All rare missense variants and the subgroups of rare damaging missense (Dmis) and loss-of-function (LoF) variants were gathered to test the accumulated association of these variants in each gene with PD. In total, 1617 rare nonsynonymous variants of DNAJ family genes with minor allele frequency less than 1% were identified in our cohort. We identified 82 rare missense variants for DNAJC26 in sporadic early-onset PD (sEOPD) or familial PD (FPD), and 17 Dmis and one LoF variant were detected among them. Gene-based burden analysis showed that the rare Dmis variants alone or Dmis plus LoF variants together of DNAJC26 were significantly enriched in PD patients. We also found suggestive associations of DNAJB2 and DNAJC18 with PD in sEOPD or FPD and DNAJC2, DNAJC10, DNAJC22, DNAJC24, DNAJC27, DNAJC28, and DNAJC29 with PD in sporadic late-onset PD. In conclusion, rare missense variants of DNAJC26 were significantly enriched in FPD or sEOPD. Moreover, DNAJB2, DNAJC2, DNAJC10, DNAJC18, DNAJC22, DNAJC24, DNAJC27, DNAJC28, and DNAJC29 were suggestively associated with PD.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Burden analysis; DNAJ family genes; Genetics; Parkinson’s disease

Mesh:

Substances:

Year:  2022        PMID: 35715682     DOI: 10.1007/s12035-022-02920-5

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.682


  43 in total

Review 1.  Synaptic, Mitochondrial, and Lysosomal Dysfunction in Parkinson's Disease.

Authors:  Maria Nguyen; Yvette C Wong; Daniel Ysselstein; Alex Severino; Dimitri Krainc
Journal:  Trends Neurosci       Date:  2018-11-30       Impact factor: 13.837

Review 2.  Environment, lifestyle, and Parkinson's disease: Implications for prevention in the next decade.

Authors:  Connie Marras; Colleen G Canning; Samuel M Goldman
Journal:  Mov Disord       Date:  2019-05-15       Impact factor: 10.338

3.  Molecular Mechanism of J-Domain-Triggered ATP Hydrolysis by Hsp70 Chaperones.

Authors:  Roman Kityk; Jürgen Kopp; Matthias P Mayer
Journal:  Mol Cell       Date:  2017-12-28       Impact factor: 17.970

4.  Parkinson's disease: etiopathogenesis and treatment.

Authors:  Joseph Jankovic; Eng King Tan
Journal:  J Neurol Neurosurg Psychiatry       Date:  2020-06-23       Impact factor: 10.154

Review 5.  The HSP70 chaperone machinery: J proteins as drivers of functional specificity.

Authors:  Harm H Kampinga; Elizabeth A Craig
Journal:  Nat Rev Mol Cell Biol       Date:  2010-08       Impact factor: 94.444

6.  Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

Authors:  Benjamin L Piette; Nader Alerasool; Zhen-Yuan Lin; Jessica Lacoste; Mandy Hiu Yi Lam; Wesley Wei Qian; Stephanie Tran; Brett Larsen; Eric Campos; Jian Peng; Anne-Claude Gingras; Mikko Taipale
Journal:  Mol Cell       Date:  2021-05-05       Impact factor: 17.970

7.  Parkinson's: A Disease of Aberrant Vesicle Trafficking.

Authors:  Pawan Kishor Singh; Miratul M K Muqit
Journal:  Annu Rev Cell Dev Biol       Date:  2020-08-04       Impact factor: 13.827

Review 8.  The genetic architecture of Parkinson's disease.

Authors:  Cornelis Blauwendraat; Mike A Nalls; Andrew B Singleton
Journal:  Lancet Neurol       Date:  2019-09-11       Impact factor: 44.182

9.  Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies.

Authors:  Mike A Nalls; Cornelis Blauwendraat; Costanza L Vallerga; Karl Heilbron; Sara Bandres-Ciga; Diana Chang; Manuela Tan; Demis A Kia; Alastair J Noyce; Angli Xue; Jose Bras; Emily Young; Rainer von Coelln; Javier Simón-Sánchez; Claudia Schulte; Manu Sharma; Lynne Krohn; Lasse Pihlstrøm; Ari Siitonen; Hirotaka Iwaki; Hampton Leonard; Faraz Faghri; J Raphael Gibbs; Dena G Hernandez; Sonja W Scholz; Juan A Botia; Maria Martinez; Jean-Christophe Corvol; Suzanne Lesage; Joseph Jankovic; Lisa M Shulman; Margaret Sutherland; Pentti Tienari; Kari Majamaa; Mathias Toft; Ole A Andreassen; Tushar Bangale; Alexis Brice; Jian Yang; Ziv Gan-Or; Thomas Gasser; Peter Heutink; Joshua M Shulman; Nicholas W Wood; David A Hinds; John A Hardy; Huw R Morris; Jacob Gratten; Peter M Visscher; Robert R Graham; Andrew B Singleton
Journal:  Lancet Neurol       Date:  2019-12       Impact factor: 44.182

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