| Literature DB >> 35707362 |
Pranjal Vaidya1, Kaustav Bera1,2, Philip A Linden3, Amit Gupta1,2, Prabhakar Shantha Rajiah4, David R Jones5, Matthew Bott5, Harvey Pass6, Robert Gilkeson1,2, Frank Jacono7, Kevin Li-Chun Hsieh8, Gong-Yau Lan8, Vamsidhar Velcheti9, Anant Madabhushi1,10.
Abstract
Objective: The timing and nature of surgical intervention for semisolid abnormalities are dependent upon distinguishing between adenocarcinoma-in-situ (AIS), minimally invasive adenocarcinoma (MIA), and invasive adenocarcinoma (INV). We sought to develop and evaluate a quantitative imaging method to determine invasiveness of small, ground-glass lesions on computed tomography (CT) chest scans.Entities:
Keywords: ct scan (CT); integrated model analysis; invasive adenocarcinoma (IA); minimally invasive adenocarcinoma (MIA); radiologists interpretation; radiomics
Year: 2022 PMID: 35707362 PMCID: PMC9190758 DOI: 10.3389/fonc.2022.902056
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1Overall workflow diagram. The nodules were segmented on the CT scans, and intratumoral and peritumoral features were extracted using MATLAB 2015. The top features were selected using the mRMR feature selection method. The validation of the radiomics model was performed using unsupervised clustering and supervised classification-based approaches.
Figure 2Data source and CONSORT diagram for patient selection.
Figure 3Pathologically proven INV (left image) and MIA (right image) cases presenting as predominantly ground-glass nodular densities which are indistinguishable on CT imaging.
Figure 4Unsupervised clustering analysis using radiomic features. (left image) K-means clustering with 4 clusters. The red dots show the centroids of the three clusters obtained via K-means clustering. The violet points represent INV patients, and the yellow points depict MIA patients. The two distinct clusters had an accuracy of 73.13% to distinguish MIA from INV cases. (right image) Hierarchical clustering using all features. On the x-axis, black color stands for the INV cases, and aquamarine color stands for the MIA cases.
Figure 5Feature maps. The first row depicts INV patient, and the bottom row depicts an MIA patient with an axial CT image as well as corresponding peritumoral and intratumoral feature maps. For the INV case, the feature maps had a higher feature expression compared to the MIA cases suggesting association between chaotic/disturbed microarchitecture and tumor invasiveness.
Model notations.
| Model | Notations |
|---|---|
| Radiomics Model | |
| Clinical Model | |
| Radiomics-Clinical Model | |
| Human Reader Model | |
| Integrated Human Reader and Radiomics Model |
AUC comparison for logistic regression model trained with tumor area MA, radiomic features, MR and combined radiomic and area based models, MR+A. P-value is calculated to observe the added benefit of tumor area in the radiomics model, MR.
| # of cases | Area MA | Radiomics MR | Rad + area MR+A | P (wrt area) | ||
|---|---|---|---|---|---|---|
| 0.73 [0.64-0.83] | 0.917 [0.87-0.97] | 0.95 [0.916-0.987] | 3.013e-06 | |||
| 0.665 | 0.862 | 0.869 | 1.362e-05 | |||
| 22 | 0.79 | 0.759 | 0.713 | 0.492 | ||
| 87 | 0.61 | 0.919 | 0.926 | 1.057e-05 | ||
| 45 | 0.57 | 0.954 | 0.836 | 2.136e-05 |
AUC comparison for logistic regression model trained with radiologists’ interpretations, MHR., radiomic features, MR, and combined radiomic and area-based models, MR+HR on the test set. P-value is calculated to observe the added benefit of MHR in the radiomics model, MR.
| Radiologist 1 MHR1 | Radiologist 2 MHR2 | Classifier MR | Combined MR+HR | P-Value | |||
|---|---|---|---|---|---|---|---|
| MR | MHR1 | ||||||
| DTest
| AUC | 0.815 | 0.796 | 0.861 | 0.041 | 4.1 e(-5) | |
| Accuracy | 0.748 | 0.742 | 0.788 | 0.828 | |||
| Sensitivity | 0.800 | 0.792 | 0.820 | 0.760 | |||
| Specificity | 0.723 | 0.640 | 0.772 | 0.861 | |||
| DTest
| AUC | 0.528 | 0.505 | 0.759 | 0.289 | 0.031 | |
| Accuracy | 0.571 | 0.571 | 0.667 | 0.761 | |||
| Sensitivity | 0.833 | 1.00 | 0.583 | 0.750 | |||
| Specificity | 0.223 | 0.00 | 0.778 | 0.778 | |||
| DTest
| AUC | 0.831 | 0.794 | 0.916 | 0.267 | 0.0015 | |
| Accuracy | 0.771 | 0.747 | 0.843 | 0.892 | |||
| Sensitivity | 0.857 | 0.818 | 0.893 | 0.893 | |||
| Specificity | 0.727 | 0.607 | 0.818 | 0.891 | |||
| DTest
| AUC | 0.856 | 0.898 | 0.953 | 0.624 | 0.025 | |
| Accuracy | 0.800 | 0.844 | 0.756 | 0.911 | |||
| Sensitivity | 0.861 | 0.889 | 1 | 0.945 | |||
| Specificity | 0.556 | 0.667 | 0.694 | 0.778 | |||
Bold numbers represent the AUCs.